Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_FL5_D02
(1147 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 34 0.24
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 34 0.24
07_03_0890 - 22332768-22333382 32 0.74
11_02_0065 - 7938007-7938393,7939292-7939435,7940597-7940665,794... 31 2.3
03_01_0515 - 3864796-3865425 31 2.3
12_02_1174 - 26696869-26698191 30 3.0
06_03_0790 - 24636805-24637770 30 3.0
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 30 3.9
07_03_1136 + 24218601-24218734,24218769-24219906 30 3.9
03_05_0919 - 28792790-28792915,28793090-28793155,28794345-287945... 30 3.9
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 29 5.2
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 29 5.2
02_05_0686 - 30900748-30902167,30903442-30904742 29 5.2
01_07_0021 - 40533864-40534583,40534779-40534814,40534909-405350... 29 5.2
10_08_0608 + 19184722-19185224,19185331-19185410,19186048-191862... 29 6.9
08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,468... 29 6.9
08_01_0059 - 394001-394708 29 9.1
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 29 9.1
02_04_0654 - 24755339-24755408,24755488-24755624,24756243-247563... 29 9.1
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 33.9 bits (74), Expect = 0.24
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPPXXXP 827
PPPP PPPP PPPPP P
Sbjct: 589 PPPPPLPNCLVPSPPPPPPPPPILPNRSVPPPPPPPPP 626
Score = 33.9 bits (74), Expect = 0.24
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPPXXXP 827
PPPP PPPP PPPPP P
Sbjct: 605 PPPPPPILPNRSVPPPPPPPPPLPNHSVLPPPPPPPPP 642
Score = 33.9 bits (74), Expect = 0.24
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPPXXXP 827
PPPP PPPP PPPPP P
Sbjct: 606 PPPPPILPNRSVPPPPPPPPPLPNHSVLPPPPPPPPPP 643
Score = 32.3 bits (70), Expect = 0.74
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPP 839
PPPP PPPP PPPPP
Sbjct: 636 PPPPPPPPSLPNRLVPPPPAPGIGNKFPAPPPPP 669
Score = 32.3 bits (70), Expect = 0.74
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPP 839
PPPP PPPP PPPPP
Sbjct: 750 PPPPPLMTGKKAPAPPPPPPQAPKPPGTVPPPPP 783
Score = 30.7 bits (66), Expect = 2.3
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPPXXXP 827
PPPP PPPP P PPP P
Sbjct: 571 PPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPPP 608
Score = 30.3 bits (65), Expect = 3.0
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPPXXXP 827
PPPP PPPP PPPP P
Sbjct: 588 PPPPPPLPNCLVPSPPPPPPPPPILPNRSVPPPPPPPP 625
Score = 29.9 bits (64), Expect = 3.9
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPPXXXP 827
PP P PPPP PPPPP P
Sbjct: 573 PPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPPPPP 610
Score = 29.9 bits (64), Expect = 3.9
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPPXXXP 827
PPP PPPP PPPPP P
Sbjct: 591 PPPLPNCLVPSPPPPPPPPPILPNRSVPPPPPPPPPLP 628
Score = 29.9 bits (64), Expect = 3.9
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPPXXXP 827
PPPP PPPP PPPP P
Sbjct: 604 PPPPPPPILPNRSVPPPPPPPPPLPNHSVLPPPPPPPP 641
Score = 29.9 bits (64), Expect = 3.9
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPPXXXP 827
PPP PPPP PPPPP P
Sbjct: 735 PPPLPAAANKRNPPAPPPPPLMTGKKAPAPPPPPPQAP 772
Score = 29.5 bits (63), Expect = 5.2
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = -2
Query: 939 PPPPXXXXXXXXXXPPPPXXXXXXXXXXXPPPP 841
PPPP PPPP PPPP
Sbjct: 622 PPPPPLPNHSVLPPPPPPPPPPSLPNRLVPPPP 654
Score = 29.1 bits (62), Expect = 6.9
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPP 839
PPPP PPPP PPP P
Sbjct: 623 PPPPLPNHSVLPPPPPPPPPPSLPNRLVPPPPAP 656
Score = 29.1 bits (62), Expect = 6.9
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPP 839
PPPP PPP PPPPP
Sbjct: 637 PPPPPPPSLPNRLVPPPPAPGIGNKFPAPPPPPP 670
Score = 29.1 bits (62), Expect = 6.9
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPP 839
PPPP PP P PPPPP
Sbjct: 638 PPPPPPSLPNRLVPPPPAPGIGNKFPAPPPPPPP 671
Score = 28.7 bits (61), Expect = 9.1
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPP 839
PPPP PPPP PPPP
Sbjct: 621 PPPPPPLPNHSVLPPPPPPPPPPSLPNRLVPPPP 654
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 33.9 bits (74), Expect = 0.24
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPPXXXP 827
PPPP PPPP PPPPP P
Sbjct: 94 PPPPPYGVNSSQPPPPPPPPPSPPPSAPPPPPPPPTQP 131
Score = 33.9 bits (74), Expect = 0.24
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPPXXXP 827
PPPP PPPP PPPPP P
Sbjct: 95 PPPPYGVNSSQPPPPPPPPPSPPPSAPPPPPPPPTQPP 132
Score = 32.3 bits (70), Expect = 0.74
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPP 839
PPPP PPPP PPPPP
Sbjct: 92 PPPPPPPYGVNSSQPPPPPPPPPSPPPSAPPPPP 125
Score = 32.3 bits (70), Expect = 0.74
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPP 839
PPPP PPPP PPPPP
Sbjct: 93 PPPPPPYGVNSSQPPPPPPPPPSPPPSAPPPPPP 126
Score = 30.7 bits (66), Expect = 2.3
Identities = 18/76 (23%), Positives = 18/76 (23%)
Frame = -3
Query: 1052 PPPPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPXXXXXXXXXXXPPPPXXXX 873
PPPPP PPP PPPP
Sbjct: 55 PPPPPPGPPPPHQPQFNFGPGPPQQQQPPPPPQMYYQPPPPPPPYGVNSSQPPPPPPPPP 114
Query: 872 XXXXXXPPPPPXXXPQ 825
PPPPP Q
Sbjct: 115 SPPPSAPPPPPPPPTQ 130
Score = 29.5 bits (63), Expect = 5.2
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = -2
Query: 939 PPPPXXXXXXXXXXPPPPXXXXXXXXXXXPPPP 841
PPPP PPPP PPPP
Sbjct: 111 PPPPSPPPSAPPPPPPPPTQPPPREAQLAPPPP 143
Score = 29.1 bits (62), Expect = 6.9
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPP 839
PPPP PPPP PPPP
Sbjct: 110 PPPPPSPPPSAPPPPPPPPTQPPPREAQLAPPPP 143
>07_03_0890 - 22332768-22333382
Length = 204
Score = 32.3 bits (70), Expect = 0.74
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPP 839
PPPP PPPP PPPPP
Sbjct: 75 PPPPPAEATPPPPPPPPPPERAVPEAADTPPPPP 108
Score = 30.7 bits (66), Expect = 2.3
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPPXXXP 827
PPPP PPP PPPPP P
Sbjct: 76 PPPPAEATPPPPPPPPPPERAVPEAADTPPPPPPPTAP 113
>11_02_0065 -
7938007-7938393,7939292-7939435,7940597-7940665,
7940762-7940809,7941488-7941584,7941688-7941767,
7941841-7941912,7942256-7942350,7943903-7943984,
7945176-7945209,7945255-7945262,7945657-7946058
Length = 505
Score = 30.7 bits (66), Expect = 2.3
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = -2
Query: 939 PPPPXXXXXXXXXXPPPPXXXXXXXXXXXPPPPXXXXP 826
PPPP PPPP PPPP P
Sbjct: 53 PPPPPQVIRVFAAAPPPPPAAFFAAVPPPPPPPFEYYP 90
>03_01_0515 - 3864796-3865425
Length = 209
Score = 30.7 bits (66), Expect = 2.3
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPPXXXP 827
PPPP PPPP PP PP P
Sbjct: 74 PPPPSVTSSPPPPPLPPPPPPPAASPPPPPPSPPPPSP 111
Score = 29.9 bits (64), Expect = 3.9
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPPXXXP 827
PPPP PP P PPPPP P
Sbjct: 71 PPPPPPPSVTSSPPPPPLPPPPPPPAASPPPPPPSPPP 108
Score = 28.7 bits (61), Expect = 9.1
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPPXXXP 827
PPPP PPPP PPPPP P
Sbjct: 91 PPPPPAASPPPPPPSPPPPSPVKSS----PPPPPAWSP 124
>12_02_1174 - 26696869-26698191
Length = 440
Score = 30.3 bits (65), Expect = 3.0
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPPXXXP 827
PPPP PPP PPPPP P
Sbjct: 125 PPPPPRTRTRVEPPHRPPPVKPQPPPSLPPPPPPPPPP 162
Score = 30.3 bits (65), Expect = 3.0
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPPXXXP 827
PPPP PPP PPPPP P
Sbjct: 126 PPPPRTRTRVEPPHRPPPVKPQPPPSLPPPPPPPPPPP 163
>06_03_0790 - 24636805-24637770
Length = 321
Score = 30.3 bits (65), Expect = 3.0
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +1
Query: 826 WGXXXGGGGGXXXXXXXXXXGGGGXXXXXXXXXXXGGG 939
WG GGGGG GGGG GGG
Sbjct: 77 WGVWSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 114
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 29.9 bits (64), Expect = 3.9
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPPXXXP 827
PPPP PPPP PPP P P
Sbjct: 1169 PPPPPPLSPSLPPPPPPPPLPSGPPPQPAPPPLPIQPP 1206
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 29.9 bits (64), Expect = 3.9
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +3
Query: 825 LGXXXGGGGGXXXXXXXXXXGGGGXXXXXXXXXXXGGGG 941
LG GGGGG GGGG GGGG
Sbjct: 169 LGRPPGGGGGGGGPGRAPGGGGGGGGPGRAPGGGGGGGG 207
>03_05_0919 -
28792790-28792915,28793090-28793155,28794345-28794530,
28794604-28795141,28795290-28795363
Length = 329
Score = 29.9 bits (64), Expect = 3.9
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +3
Query: 825 LGXXXGGGGGXXXXXXXXXXGGGGXXXXXXXXXXXGGGG 941
LG GGGGG GGGG GGGG
Sbjct: 146 LGGGGGGGGGGGGGDVGGDGGGGGDGNVGGGGGGGGGGG 184
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 29.5 bits (63), Expect = 5.2
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPP 842
PPPP PPPP PPPP
Sbjct: 267 PPPPQVPPPPPQAPPPPPPNAPMGMPPRIPPPP 299
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 29.5 bits (63), Expect = 5.2
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPPXXXP 827
PPPP PPPP PPPPP P
Sbjct: 349 PPPPPPPPPPPPP--PPPPKLNTAPKPPPPPPPPPSVP 384
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.5 bits (63), Expect = 5.2
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = -2
Query: 939 PPPPXXXXXXXXXXPPPPXXXXXXXXXXXPPPP 841
PPPP PPPP PPPP
Sbjct: 315 PPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPP 347
Score = 29.5 bits (63), Expect = 5.2
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPP 842
PPPP PPPP PPPP
Sbjct: 338 PPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPP 370
Score = 28.7 bits (61), Expect = 9.1
Identities = 14/40 (35%), Positives = 14/40 (35%), Gaps = 2/40 (5%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXX--PPPPPXXXP 827
PPPP PPPP PPPPP P
Sbjct: 314 PPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGP 353
Score = 28.7 bits (61), Expect = 9.1
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPPXXXP 827
PPPP PPPP PPPPP P
Sbjct: 329 PPPPKAAPPPPPPKGPPPP----PPAKGPPPPPPPKGP 362
Score = 28.7 bits (61), Expect = 9.1
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPP 839
PPPP PPP PPPPP
Sbjct: 337 PPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPP 370
>01_07_0021 -
40533864-40534583,40534779-40534814,40534909-40535048,
40535837-40535922,40536430-40536653,40536770-40536865,
40538766-40538833,40539945-40540055,40540799-40540955
Length = 545
Score = 29.5 bits (63), Expect = 5.2
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPPXXXP 827
PPPP PPPP PPPPP P
Sbjct: 418 PPPPLP--SDAFEQPPPPPEHPPPPESTSPPPPPTSDP 453
>10_08_0608 +
19184722-19185224,19185331-19185410,19186048-19186235,
19187021-19187927,19188015-19188142,19189270-19189356,
19189422-19189472,19189582-19189668,19189746-19189873,
19190469-19190608,19190721-19190882,19190964-19192733,
19192807-19192922,19193077-19193227,19193243-19193371,
19193598-19194139
Length = 1722
Score = 29.1 bits (62), Expect = 6.9
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPP 839
PPPP P PP PPPPP
Sbjct: 26 PPPPPPHPPPPPPLEPAPPSTPQLRGEASPPPPP 59
>08_01_0539 +
4679392-4681282,4682060-4682104,4682403-4683560,
4683834-4684204,4684290-4684835,4684927-4685027,
4685117-4685933,4686025-4686213,4686313-4686384,
4686477-4686587,4686647-4686652,4686694-4686794,
4687714-4687813,4687891-4687986,4688157-4688273,
4688367-4688492,4688566-4688619,4688745-4688992,
4689087-4689195,4689284-4689583,4689799-4689963
Length = 2240
Score = 29.1 bits (62), Expect = 6.9
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPP 839
PPPP PPPP PPP P
Sbjct: 425 PPPPPLPPPPPPPPPPPPPLPPNMPPPLPPPPEP 458
>08_01_0059 - 394001-394708
Length = 235
Score = 28.7 bits (61), Expect = 9.1
Identities = 14/40 (35%), Positives = 14/40 (35%), Gaps = 2/40 (5%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPP--XXXXXXXXXXPPPPPXXXP 827
PPPP PPPP PPPPP P
Sbjct: 3 PPPPPRRAPPPPATPPPPPRRAPPPPSPPIRPPPPPTPRP 42
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 28.7 bits (61), Expect = 9.1
Identities = 14/40 (35%), Positives = 14/40 (35%), Gaps = 2/40 (5%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPP--XXXXXXXXXXPPPPPXXXP 827
PPPP PPPP PPPPP P
Sbjct: 58 PPPPLPTPTVTTPTPPPPPPAPRPPRRHHRIPPPPPPLLP 97
>02_04_0654 -
24755339-24755408,24755488-24755624,24756243-24756326,
24756929-24756944,24758035-24758405
Length = 225
Score = 28.7 bits (61), Expect = 9.1
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPP 839
PPPP PP P PPPPP
Sbjct: 35 PPPPPLFPAMSARPQPPRPAHPARFVKPMPPPPP 68
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,473,096
Number of Sequences: 37544
Number of extensions: 572617
Number of successful extensions: 4984
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2685
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3479804408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -