Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_FL5_D02
(1147 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 34 0.22
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 34 0.22
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.66
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.66
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 32 0.66
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.66
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 32 0.66
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 31 2.0
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 31 2.0
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 31 2.0
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 4.7
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 8.1
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 8.1
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.9 bits (74), Expect = 0.22
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPPXXXP 827
PPPP PPPP PPPPP P
Sbjct: 319 PPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYP 356
Score = 33.9 bits (74), Expect = 0.22
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPPXXXP 827
PPPP PPPP PPPPP P
Sbjct: 335 PPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPP 372
Score = 29.9 bits (64), Expect = 3.5
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPPXXXP 827
PPPP PPPP PPPP P
Sbjct: 334 PPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRP 371
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.9 bits (74), Expect = 0.22
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPPXXXP 827
PPPP PPPP PPPPP P
Sbjct: 329 PPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYP 366
Score = 33.9 bits (74), Expect = 0.22
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPPXXXP 827
PPPP PPPP PPPPP P
Sbjct: 345 PPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPP 382
Score = 29.9 bits (64), Expect = 3.5
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPPXXXP 827
PPPP PPPP PPPP P
Sbjct: 344 PPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRP 381
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.3 bits (70), Expect = 0.66
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPP 839
PPPP PPPP PPPPP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPP 746
Score = 32.3 bits (70), Expect = 0.66
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPP 839
PPPP PPPP PPPPP
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP 747
Score = 32.3 bits (70), Expect = 0.66
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPP 839
PPPP PPPP PPPPP
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 762
Score = 32.3 bits (70), Expect = 0.66
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPP 839
PPPP PPPP PPPPP
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Score = 32.3 bits (70), Expect = 0.66
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPP 839
PPPP PPPP PPPPP
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
Score = 30.7 bits (66), Expect = 2.0
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = -2
Query: 939 PPPPXXXXXXXXXXPPPPXXXXXXXXXXXPPPPXXXXP 826
PPPP PPPP PPPP P
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAP 795
Score = 30.3 bits (65), Expect = 2.7
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPPXXXP 827
PPPP PPPP PPPP P
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 765
Score = 28.7 bits (61), Expect = 8.1
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPP 839
PPPP PPP PPPPP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.3 bits (70), Expect = 0.66
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPP 839
PPPP PPPP PPPPP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPP 746
Score = 32.3 bits (70), Expect = 0.66
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPP 839
PPPP PPPP PPPPP
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP 747
Score = 32.3 bits (70), Expect = 0.66
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPP 839
PPPP PPPP PPPPP
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 762
Score = 32.3 bits (70), Expect = 0.66
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPP 839
PPPP PPPP PPPPP
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Score = 32.3 bits (70), Expect = 0.66
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPP 839
PPPP PPPP PPPPP
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
Score = 30.7 bits (66), Expect = 2.0
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = -2
Query: 939 PPPPXXXXXXXXXXPPPPXXXXXXXXXXXPPPPXXXXP 826
PPPP PPPP PPPP P
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAP 795
Score = 30.3 bits (65), Expect = 2.7
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPPXXXP 827
PPPP PPPP PPPP P
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 765
Score = 28.7 bits (61), Expect = 8.1
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPP 839
PPPP PPP PPPPP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 32.3 bits (70), Expect = 0.66
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPP 839
PPPP PPPP PPPPP
Sbjct: 69 PPPPPPPLISILQQAPPPPPPPPPPTLKAPPPPP 102
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.3 bits (70), Expect = 0.66
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPP 839
PPPP PPPP PPPPP
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPP 329
Score = 32.3 bits (70), Expect = 0.66
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPP 839
PPPP PPPP PPPPP
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP 330
Score = 32.3 bits (70), Expect = 0.66
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPP 839
PPPP PPPP PPPPP
Sbjct: 312 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 345
Score = 32.3 bits (70), Expect = 0.66
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPP 839
PPPP PPPP PPPPP
Sbjct: 326 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 359
Score = 32.3 bits (70), Expect = 0.66
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPP 839
PPPP PPPP PPPPP
Sbjct: 327 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 360
Score = 30.7 bits (66), Expect = 2.0
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = -2
Query: 939 PPPPXXXXXXXXXXPPPPXXXXXXXXXXXPPPPXXXXP 826
PPPP PPPP PPPP P
Sbjct: 341 PPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAP 378
Score = 30.3 bits (65), Expect = 2.7
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPPXXXP 827
PPPP PPPP PPPP P
Sbjct: 311 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 348
Score = 28.7 bits (61), Expect = 8.1
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPP 839
PPPP PPP PPPPP
Sbjct: 325 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 358
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 32.3 bits (70), Expect = 0.66
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPP 839
PPPP PPPP PPPPP
Sbjct: 561 PPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPP 594
Score = 32.3 bits (70), Expect = 0.66
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPP 839
PPPP PPPP PPPPP
Sbjct: 562 PPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPP 595
Score = 32.3 bits (70), Expect = 0.66
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPP 839
PPPP PPPP PPPPP
Sbjct: 563 PPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPP 596
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 30.7 bits (66), Expect = 2.0
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPPXXXP 827
PPPP PPP PPPPP P
Sbjct: 218 PPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPP 255
Score = 29.9 bits (64), Expect = 3.5
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPPXXXP 827
PPP PPPP PPPPP P
Sbjct: 219 PPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPPP 256
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 30.7 bits (66), Expect = 2.0
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPPXXXP 827
PPPP PPP PPPPP P
Sbjct: 204 PPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPP 241
Score = 29.9 bits (64), Expect = 3.5
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPPXXXP 827
PPP PPPP PPPPP P
Sbjct: 205 PPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPPP 242
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 30.7 bits (66), Expect = 2.0
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPPXXXP 827
PPPP PPP PPPPP P
Sbjct: 204 PPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPP 241
Score = 29.9 bits (64), Expect = 3.5
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPPXXXP 827
PPP PPPP PPPPP P
Sbjct: 205 PPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPPP 242
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.5 bits (63), Expect = 4.7
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = -2
Query: 939 PPPPXXXXXXXXXXPPPPXXXXXXXXXXXPPPP 841
PPPP PPPP PPPP
Sbjct: 742 PPPPMFQQGFNAGAPPPPFGRGAGPMSSFPPPP 774
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 28.7 bits (61), Expect = 8.1
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXPPPPP 839
PP P PPPP PPPPP
Sbjct: 523 PPMPGMAPLSTGAPTPPPPPPVGMANGGPPPPPP 556
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.7 bits (61), Expect = 8.1
Identities = 14/40 (35%), Positives = 14/40 (35%), Gaps = 2/40 (5%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPPPXXXXXXXXXXP--PPPPXXXP 827
PPPP PPPP P PPPP P
Sbjct: 31 PPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPP 70
Score = 28.7 bits (61), Expect = 8.1
Identities = 14/40 (35%), Positives = 14/40 (35%), Gaps = 2/40 (5%)
Frame = -1
Query: 940 PPPPXXXXXXXXXXXPPP--PXXXXXXXXXXPPPPPXXXP 827
PPPP PPP P PPPPP P
Sbjct: 32 PPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPP 71
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,577,200
Number of Sequences: 27780
Number of extensions: 324338
Number of successful extensions: 2282
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 378
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1191
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3109468484
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -