Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_FL5_B07
(840 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 48 8e-08
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 48 8e-08
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 48 1e-07
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 46 4e-07
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 46 4e-07
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 46 4e-07
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 46 4e-07
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 46 4e-07
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 45 1e-06
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 44 2e-06
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 44 2e-06
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 44 2e-06
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 43 3e-06
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 42 5e-06
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 42 7e-06
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 42 9e-06
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 41 1e-05
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 41 1e-05
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 39 5e-05
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 38 9e-05
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 38 9e-05
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 34 0.001
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 23 4.6
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 48.4 bits (110), Expect = 8e-08
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +2
Query: 233 NIRESESTVRIQADLXMNWIDKRLSWNAGEWGXSXWL-VSSERLWRPDVVLLNAA-ASTA 406
++ E + A L + W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 407 GDYALRARVSXNGSXSWI 460
G Y V+ NGS ++
Sbjct: 153 GTYQTNVVVTHNGSCLYV 170
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 48.4 bits (110), Expect = 8e-08
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +2
Query: 233 NIRESESTVRIQADLXMNWIDKRLSWNAGEWGXSXWL-VSSERLWRPDVVLLNAA-ASTA 406
++ E + A L + W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 407 GDYALRARVSXNGSXSWI 460
G Y V+ NGS ++
Sbjct: 153 GTYQTNVVVTHNGSCLYV 170
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 48.0 bits (109), Expect = 1e-07
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +2
Query: 233 NIRESESTVRIQADLXMNWIDKRLSWNAGEWGXSXWL-VSSERLWRPDVVLLNAA-ASTA 406
++ E + A L + W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 407 GDYALRARVSXNGSXSWI 460
G Y V+ NGS ++
Sbjct: 85 GTYQTSVVVTHNGSCLYV 102
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 46.0 bits (104), Expect = 4e-07
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +2
Query: 233 NIRESESTVRIQADLXMNWIDKRLSWNAGEWGXSXWL-VSSERLWRPDVVLLNAA-ASTA 406
++ E + A L + W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 407 GDYALRARVSXNGSXSWI 460
G Y V+ +GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 46.0 bits (104), Expect = 4e-07
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +2
Query: 233 NIRESESTVRIQADLXMNWIDKRLSWNAGEWGXSXWL-VSSERLWRPDVVLLNAA-ASTA 406
++ E + A L + W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 407 GDYALRARVSXNGSXSWI 460
G Y V+ +GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 46.0 bits (104), Expect = 4e-07
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +2
Query: 233 NIRESESTVRIQADLXMNWIDKRLSWNAGEWGXSXWL-VSSERLWRPDVVLLNAA-ASTA 406
++ E + A L + W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 407 GDYALRARVSXNGSXSWI 460
G Y V+ +GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 46.0 bits (104), Expect = 4e-07
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +2
Query: 233 NIRESESTVRIQADLXMNWIDKRLSWNAGEWGXSXWL-VSSERLWRPDVVLLNAA-ASTA 406
++ E + A L + W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 407 GDYALRARVSXNGSXSWI 460
G Y V+ +GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 46.0 bits (104), Expect = 4e-07
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +2
Query: 233 NIRESESTVRIQADLXMNWIDKRLSWNAGEWGXSXWL-VSSERLWRPDVVLLNAA-ASTA 406
++ E + A L + W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 407 GDYALRARVSXNGSXSWI 460
G Y V+ +GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 44.8 bits (101), Expect = 1e-06
Identities = 37/161 (22%), Positives = 66/161 (40%), Gaps = 10/161 (6%)
Frame = +2
Query: 122 NARSLSLMIDSXXXTYDRDSPPD---SKIXVXLTLHLRHAN-IRESESTVRIQADLXMNW 289
N ++S ++D+ YD PD V + + +R I E + T + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 290 IDKRLSWNAGEWGXSXWLVSSERLWRPDVVLLNAAAS---TAGDYALRARVSXNGSXSWI 460
+D+RL++ G+ + + R+W+PD N S T R+ +G +
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 461 XRLDMXTPXSMQLDNWPNDMXTXXXQXRFY*CT---IVTKW 574
RL + M L+N+P D Q + T ++ KW
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQFGSFGYTKRDVIYKW 162
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 44.0 bits (99), Expect = 2e-06
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 2/113 (1%)
Frame = +2
Query: 194 KIXVXLTLHLRHANIRESESTVRIQADLXMNWIDKRLSWNAGEWGXSXWL-VSSERLWRP 370
KI + L+ L N++ T + + +W D +L W+ E+G L V S+ +WRP
Sbjct: 53 KIKLKLS-QLIDVNLKNQIMTTNLWVE--QSWYDYKLKWDPKEYGGVEMLHVPSDHIWRP 109
Query: 371 DVVLL-NAAASTAGDYALRARVSXNGSXSWIXRLDMXTPXSMQLDNWPNDMXT 526
D+VL NA + A +A ++ G W + + ++ +P D T
Sbjct: 110 DIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCEIDVEYFPFDEQT 162
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 43.6 bits (98), Expect = 2e-06
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Frame = +2
Query: 167 YDRDSPPDSK--IXVXLTLHLRHANIRESESTVRIQADLXMNWIDKRLSWNAGEW-GXSX 337
YDRD P+ K + L ++H N+ E TV L + W L+W + E+ +
Sbjct: 48 YDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFDSINS 107
Query: 338 WLVSSERLWRPDVVL 382
V S +W PD+V+
Sbjct: 108 IRVKSYEIWVPDIVM 122
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 43.6 bits (98), Expect = 2e-06
Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Frame = +2
Query: 233 NIRESESTVRIQADLXMNWIDKRLSWNAGEWGXSXWL-VSSERLWRPDVVLLNAAASTAG 409
N+ E ++ L W D +L W+ ++G L + +++W+PD+VL N A G
Sbjct: 65 NVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNA---DG 121
Query: 410 DYALRAR----VSXNGSXSWIXRLDMXTPXSMQLDNWPNDMXT 526
+Y +R + + NG W+ + ++ + +P D T
Sbjct: 122 NYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQT 164
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 43.2 bits (97), Expect = 3e-06
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 3/114 (2%)
Frame = +2
Query: 194 KIXVXLTL-HLRHANIRESESTVRIQADLXMNWIDKRLSWNAGEWGXSXWL-VSSERLWR 367
++ + L L L N++ T + + +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLWVE--QSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 368 PDVVLL-NAAASTAGDYALRARVSXNGSXSWIXRLDMXTPXSMQLDNWPNDMXT 526
PD+VL NA + +A V +G W + S+ ++ +P D+ T
Sbjct: 113 PDIVLYNNADGNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFPYDVQT 166
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 42.3 bits (95), Expect = 5e-06
Identities = 29/114 (25%), Positives = 50/114 (43%), Gaps = 3/114 (2%)
Frame = +2
Query: 194 KIXVXLTL-HLRHANIRESESTVRIQADLXMNWIDKRLSWNAGEWGXSXWL-VSSERLWR 367
++ + L L L N++ T + + +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLWVE--QSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 368 PDVVLL-NAAASTAGDYALRARVSXNGSXSWIXRLDMXTPXSMQLDNWPNDMXT 526
PD+VL NA + A +A + G W + + ++ +P D T
Sbjct: 113 PDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDEQT 166
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 41.9 bits (94), Expect = 7e-06
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = +2
Query: 233 NIRESESTVRIQADLXMNWIDKRLSWNAGEWGXSXWL-VSSERLWRPDVVLL-NAAASTA 406
N++ T + + W D +L WN E+G L V SE +W PD+VL NA +
Sbjct: 74 NLKNQVMTTNVWVE--QRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYNNADGNYE 131
Query: 407 GDYALRARVSXNGSXSW 457
+A + G SW
Sbjct: 132 VTLMTKATLKYTGDVSW 148
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 41.5 bits (93), Expect = 9e-06
Identities = 39/152 (25%), Positives = 58/152 (38%), Gaps = 9/152 (5%)
Frame = +2
Query: 98 IASAAECENARSLSLMIDSXXXTYDRDSPPDSK----IXVXLTLHLRHA---NIRESEST 256
I SA C + D Y+R P S + V L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 257 VRIQADLXMNWIDKRLSWNAGEWGXSXWL-VSSERLWRPDVVLLNAAASTAGDYAL-RAR 430
+ L W D + W+ E+G L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 431 VSXNGSXSWIXRLDMXTPXSMQLDNWPNDMXT 526
+ G W + + + +P D T
Sbjct: 127 LHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQT 158
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 41.1 bits (92), Expect = 1e-05
Identities = 28/111 (25%), Positives = 43/111 (38%), Gaps = 4/111 (3%)
Frame = +2
Query: 197 IXVXLTLHLRHA-NIRESESTVRIQADLXMNWIDKRLSWNAGEW-GXSXWLVSSERLWRP 370
+ V L L H ++ E + + W D L WNA E+ G V R+WRP
Sbjct: 31 LAVVFGLSLHHIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRP 90
Query: 371 DVVLLNAAASTAGDYALRAR--VSXNGSXSWIXRLDMXTPXSMQLDNWPND 517
D +L N A + VS G W+ + + ++ +P D
Sbjct: 91 DTILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFD 141
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 41.1 bits (92), Expect = 1e-05
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +2
Query: 275 LXMNWIDKRLSWNAGEWGXSXWL-VSSERLWRPDVVLLNAA-ASTAGDYALRARVSXNGS 448
L + W D + WN ++G L + RLW+PDV++ N+A G Y V NG+
Sbjct: 76 LKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGT 135
Query: 449 XSWI 460
++
Sbjct: 136 CLYV 139
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 39.1 bits (87), Expect = 5e-05
Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 8/139 (5%)
Frame = +2
Query: 125 ARSLSLMIDSXXXTYDRDSPPD----SKIXVXLTLHLRHAN-IRESESTVRIQADLXMNW 289
+R++++++++ Y+ + P + V + +R + E + + +W
Sbjct: 34 SRNITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSW 93
Query: 290 IDKRLSWNAGEWGXSXWLVSSERLWRPDVVLLNAAASTAGDYAL---RARVSXNGSXSWI 460
D RLS+ S + ER+WRPD N S + R+S +G +
Sbjct: 94 RDSRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYS 153
Query: 461 XRLDMXTPXSMQLDNWPND 517
RL + M+L N+P D
Sbjct: 154 MRLTIKAKCPMELRNFPMD 172
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 38.3 bits (85), Expect = 9e-05
Identities = 22/93 (23%), Positives = 40/93 (43%), Gaps = 4/93 (4%)
Frame = +2
Query: 251 STVRIQADLXMNWIDKRLSWNAGEW-GXSXWLVSSERLWRPDVVLLNAAAST---AGDYA 418
S + + + + + W D LSW ++ G + V S+ +W PD+ + N+ T G
Sbjct: 87 SVMELHSWMTLMWTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPP 146
Query: 419 LRARVSXNGSXSWIXRLDMXTPXSMQLDNWPND 517
V +GS S + + + +WP D
Sbjct: 147 TTCLVFSSGSVSCVPSVKHVAKCATDFSSWPYD 179
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 38.3 bits (85), Expect = 9e-05
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +2
Query: 233 NIRESESTVRIQADLXMNWIDKRLSWNAGEWGXSXWL-VSSERLWRPDVVLLNAA 394
N++ T + + W D +L WN ++G L V SE +W PD+VL N A
Sbjct: 61 NLKNQIMTTNVWVE--QEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA 113
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 34.3 bits (75), Expect = 0.001
Identities = 28/119 (23%), Positives = 48/119 (40%), Gaps = 5/119 (4%)
Frame = +2
Query: 176 DSPPDSKIXVXLTLHLRH-ANIRESESTVRIQADLXMNWIDKRLSWN-AGEWGXSXWLVS 349
++ D V + L +R A I + + +Q W+D+RL +N G L
Sbjct: 52 ENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYLTLTD 111
Query: 350 SERLWRPDVVLLNAAASTAGDYAL---RARVSXNGSXSWIXRLDMXTPXSMQLDNWPND 517
+ R+W PD+ N + + R+ NGS + R+ + M L +P D
Sbjct: 112 ASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLD 170
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 22.6 bits (46), Expect = 4.6
Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 5/61 (8%)
Frame = +2
Query: 233 NIRESESTVRIQADLXMNWIDKRLSWN--AGEWGXSXWLVSSE---RLWRPDVVLLNAAA 397
+I + R+ + +WI+ RL E G + E LW+PD LNA
Sbjct: 24 SINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDSLWQPDPYFLNAKV 83
Query: 398 S 400
S
Sbjct: 84 S 84
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,454
Number of Sequences: 438
Number of extensions: 2937
Number of successful extensions: 48
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26945694
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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