Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_FL5_B03
(848 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0377 - 4970034-4970687 37 0.018
03_05_1019 + 29736644-29736709,29737156-29737515,29737595-297377... 32 0.50
09_03_0111 - 12440818-12441129,12441242-12441585,12441663-124419... 32 0.66
09_04_0477 - 17932797-17933974,17934454-17934612,17934693-17934957 31 1.2
10_01_0054 - 773395-774518,776957-777124,777455-778376 31 1.5
03_05_0507 + 25017031-25017333,25017397-25017855 31 1.5
09_02_0045 + 3479503-3480285 30 2.0
04_04_0630 - 26719136-26719150,26720065-26720134,26720438-26721912 30 2.0
12_01_0913 + 8882193-8883510,8887633-8887865,8889619-8889871,889... 30 2.7
04_01_0609 + 7966263-7966366,7967945-7968706,7972607-7972851,797... 30 2.7
03_02_0372 + 7864015-7864065,7864167-7864208,7864292-7864322,786... 30 2.7
09_04_0479 - 17948043-17949037,17949554-17949715,17949809-179502... 29 3.5
03_01_0612 - 4501595-4501619,4501752-4501906,4502051-4502092,450... 29 4.7
02_04_0413 + 22681957-22682035,22682253-22682788 29 4.7
12_01_0018 + 132654-133304,133726-134265,134357-134436,134673-13... 29 6.2
09_04_0472 - 17895285-17896459,17897113-17897271,17897374-178977... 29 6.2
07_03_1583 - 27898375-27898436,27898455-27898539,27898621-278987... 29 6.2
07_03_1736 + 29130118-29130294,29130649-29130703,29130837-291310... 24 6.9
04_04_1335 - 32730516-32730570,32730655-32731154,32731235-327314... 28 8.2
04_04_1268 - 32262994-32263017,32263411-32263488,32263653-322638... 28 8.2
>04_01_0377 - 4970034-4970687
Length = 217
Score = 37.1 bits (82), Expect = 0.018
Identities = 35/141 (24%), Positives = 48/141 (34%), Gaps = 12/141 (8%)
Frame = +1
Query: 460 LRRGHCVEPTCSPACDSYSSC-TDFNVCTCVNNTIALNGSQC---APVCPDGYYNDPVEC 627
L R +C S AC S C + TC NN C + C G N P
Sbjct: 44 LGRDYCGTGCQSGACCSSQRCGSQGGGATCSNNQCCSQYGYCGFGSEYCGSGCQNGPCRA 103
Query: 628 SPRCERCVNGTCTEPGLCTCDSGYKNI-DDVCVPQCLDXRNGECVAPNDC-------LCH 783
+C R NG +C GY + + C C ++G C C C
Sbjct: 104 DIKCGRNANGELCPNNMCCSQWGYCGLGSEFCGNGC---QSGACCPEKRCGKQAGGDKCP 160
Query: 784 DNYXMSNGXCAPVFRRACTNG 846
+N+ S G + C +G
Sbjct: 161 NNFCCSAGGYCGLGGNYCGSG 181
>03_05_1019 +
29736644-29736709,29737156-29737515,29737595-29737735,
29737912-29738044,29738344-29738457,29738553-29738701,
29740815-29740907,29741019-29741079,29741180-29741512,
29742149-29742224,29742322-29742421,29743300-29743369,
29743987-29744082,29744355-29744402,29744427-29744658,
29745186-29745246,29745265-29745375
Length = 747
Score = 32.3 bits (70), Expect = 0.50
Identities = 28/91 (30%), Positives = 36/91 (39%), Gaps = 11/91 (12%)
Frame = +1
Query: 517 SCTDFNVC---TCVNNTIALNGSQCAPVCPD--GYYNDPV---ECSPRCERCVNGTCTEP 672
S T N C C NN++ + CP G P C +C +G C
Sbjct: 524 SMTQGNGCYQHRCTNNSLEVAVDGIWKSCPQTGGPVQFPGFNGSCPAKCTG--HGICKAN 581
Query: 673 GLCTCDSGYKNID---DVCVPQCLDXRNGEC 756
G+C C+SG+ ID VC QC G C
Sbjct: 582 GICECESGWTGIDCSTAVCDEQC-SLHGGVC 611
>09_03_0111 -
12440818-12441129,12441242-12441585,12441663-12441989,
12443444-12443602,12443687-12443784,12444745-12444821
Length = 438
Score = 31.9 bits (69), Expect = 0.66
Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 12/59 (20%)
Frame = +1
Query: 679 CTCDSGYKN---IDDVC--VPQCLDXRNGEC-------VAPNDCLCHDNYXMSNGXCAP 819
C C GY+ I D C + +CLD C + DC C+ M NG C P
Sbjct: 41 CKCSHGYEGNPYIKDGCKDINECLDNATYPCMGICKNTIGSFDCSCYPGSYMKNGFCLP 99
>09_04_0477 - 17932797-17933974,17934454-17934612,17934693-17934957
Length = 533
Score = 31.1 bits (67), Expect = 1.2
Identities = 20/59 (33%), Positives = 24/59 (40%), Gaps = 12/59 (20%)
Frame = +1
Query: 679 CTCDSGYKN---IDDVC--VPQCLDXRNGEC--VAPND-----CLCHDNYXMSNGXCAP 819
C C GY+ I D C + +CLD C + N C CH M NG C P
Sbjct: 71 CNCSHGYEGNPYIKDGCEDINECLDNVTYPCPGICNNTMGSFTCSCHQGNYMENGTCIP 129
>10_01_0054 - 773395-774518,776957-777124,777455-778376
Length = 737
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/48 (39%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Frame = +1
Query: 646 CVNGTCTEPGLCTCDSGYKN--IDDVCVPQCLDXRNGECVAPNDCLCH 783
CVN T C C SGY+ DD C D EC PN CH
Sbjct: 276 CVNSTNGLGYYCNCSSGYEGNPYDDDPNKGCKDI--DECAHPNKYPCH 321
>03_05_0507 + 25017031-25017333,25017397-25017855
Length = 253
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -3
Query: 324 NAHV*FGYNARTAVSL--AATSFLIVDQTSALPYDRYVHGGNSF 199
NA Y+AR A S+ A L V +A+P DR+ H G+ F
Sbjct: 117 NAQAYHAYHARAAASVRVAVHDALFVRDLAAIPEDRWAHDGDYF 160
>09_02_0045 + 3479503-3480285
Length = 260
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = +1
Query: 481 EPTCS---PACDSYSSCTDFNVCTCVNNTIALNGSQ 579
EP+CS P+ + C D ++ C N+IAL+G Q
Sbjct: 186 EPSCSKIVPSNEPCVRCKDIDINACATNSIALSGLQ 221
>04_04_0630 - 26719136-26719150,26720065-26720134,26720438-26721912
Length = 519
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Frame = +1
Query: 445 PEPLVLRRGHCVEPTCSPACDSYSSCTDFNVCTCVNNTI-ALNGSQCAP-VCPDGYY 609
P P+ RR C P CS A +SS ++C + A+ CA CP YY
Sbjct: 141 PPPIDSRRISCASPLCSAA---HSSAPTSDLCAAARCPLDAIETDSCASHACPPLYY 194
>12_01_0913 +
8882193-8883510,8887633-8887865,8889619-8889871,
8891281-8891470,8891641-8891773,8891797-8891886
Length = 738
Score = 29.9 bits (64), Expect = 2.7
Identities = 32/113 (28%), Positives = 44/113 (38%), Gaps = 8/113 (7%)
Frame = +1
Query: 499 ACDSYSSCTDFNVCTCVNNTIALNGSQC----APVCPDGYYNDPVECSPRCERCVNGTCT 666
+CDSY+ C F +C +N A + +C +P P + E S C R V C
Sbjct: 304 SCDSYAKCGAFGLCD--SNAGATSICRCVKGFSPASPAEW--SMREYSGGCRRDVALDCG 359
Query: 667 EPGLCTCDSGYKNID----DVCVPQCLDXRNGECVAPNDCLCHDNYXMSNGXC 813
G G K D V + LD CVA C+ + +S G C
Sbjct: 360 TDGFAVL-RGVKLPDTRNASVDMGVKLDECRARCVANCSCVAYAAADLSGGGC 411
>04_01_0609 +
7966263-7966366,7967945-7968706,7972607-7972851,
7976940-7977107,7977471-7977734,7977962-7978509
Length = 696
Score = 29.9 bits (64), Expect = 2.7
Identities = 35/119 (29%), Positives = 45/119 (37%), Gaps = 2/119 (1%)
Frame = +1
Query: 484 PTCSPAC--DSYSSCTDFNVCTCVNNTIALNGSQCAPVCPDGYYNDPVECSPRCERCVNG 657
P C P DS N C N T L+G C C +GY +P P + VN
Sbjct: 319 PACRPETNYDSPFGACHSNHSKCANVTSGLDGYFCN--CSEGYIGNPY--IPDGCKDVN- 373
Query: 658 TCTEPGLCTCDSGYKNIDDVCVPQCLDXRNGECVAPNDCLCHDNYXMSNGXCAPVFRRA 834
C +C S KN + +C D G+ DN + G C P+F RA
Sbjct: 374 ECENNSICGAGSTCKNTEGSY--RC-DCNFGQR--------RDNSSDNMGNCEPIFSRA 421
>03_02_0372 +
7864015-7864065,7864167-7864208,7864292-7864322,
7864472-7864653
Length = 101
Score = 29.9 bits (64), Expect = 2.7
Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
Frame = +1
Query: 568 NGSQCAPVCPDGYYNDPVECSPRCE-RCVNGTCTEPGLCTCDSGYKNIDDVCVPQCLDXR 744
NG PV +G + EC +C+ RC EP L C+ +C +CL
Sbjct: 25 NGGFYRPVGAEGSVSIE-ECPQKCDYRCSATKRQEPCLKYCN--------ICCQKCLCVP 75
Query: 745 NGECVAPNDCLCHDNYXMSNG 807
+G +C C++N S G
Sbjct: 76 SGTSGNKEECPCYNNLKSSQG 96
>09_04_0479 -
17948043-17949037,17949554-17949715,17949809-17950262,
17952895-17953326
Length = 680
Score = 29.5 bits (63), Expect = 3.5
Identities = 21/78 (26%), Positives = 30/78 (38%), Gaps = 13/78 (16%)
Frame = +1
Query: 625 CSPRCERCVNGTCTEPGL-CTCDSGYKN---IDDVC--VPQCLDXRNGEC--VAPND--- 771
C +C++ G C C +GY+ I D C + +CL+ C + N
Sbjct: 259 CISNNSQCIDNLTNAQGYRCKCSNGYEGNPYIKDGCKDIDECLNNATYPCKGICTNTLGN 318
Query: 772 --CLCHDNYXMSNGXCAP 819
C C M NG C P
Sbjct: 319 FTCSCSPGSYMMNGDCMP 336
>03_01_0612 -
4501595-4501619,4501752-4501906,4502051-4502092,
4502238-4502279,4502365-4502464,4502825-4502889,
4503140-4503217
Length = 168
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +3
Query: 351 LDIRGEDRQLCTEMHERVRERN--LRGARGVHLSRASGPQTRTL 476
LD++GED C + E + E + LR RG L R + Q + L
Sbjct: 23 LDLQGEDSSTCARLKEELAETSLRLRQMRGEELHRLNVEQLQEL 66
>02_04_0413 + 22681957-22682035,22682253-22682788
Length = 204
Score = 29.1 bits (62), Expect = 4.7
Identities = 27/102 (26%), Positives = 35/102 (34%), Gaps = 2/102 (1%)
Frame = +1
Query: 388 KCTSGCVNGTCEAPEVCTCPEPL--VLRRGHCVEPTCSPACDSYSSCTDFNVCTCVNNTI 561
K GC G + + CP P CV P C C+S + C N C+
Sbjct: 71 KFGGGCCCGAGCSEQCAECPRPPHPPPSPSPCVHPPC---CESAAGCC-CNGCSGGG--- 123
Query: 562 ALNGSQCAPVCPDGYYNDPVECSPRCERCVNGTCTEPGLCTC 687
G QC P ++ P + C C G C P C
Sbjct: 124 -CGGGQCPPSPSCENHHPPCKPGCCCCGCSGGECPPPPSPPC 164
>12_01_0018 +
132654-133304,133726-134265,134357-134436,134673-134949
Length = 515
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = -3
Query: 303 YNARTAVSL--AATSFLIVDQTSALPYDRYVHGGNSF 199
Y+AR A S+ AA L +A+P DR+ H G+ F
Sbjct: 81 YHARAAASVRVAAHDALFARDLAAIPEDRWAHDGDYF 117
>09_04_0472 -
17895285-17896459,17897113-17897271,17897374-17897794,
17898520-17898552,17898902-17899384
Length = 756
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 12/59 (20%)
Frame = +1
Query: 679 CTCDSGYKN---IDDVC--VPQCLDXRNGEC--VAPND-----CLCHDNYXMSNGXCAP 819
C C GY+ + D C + +CLD C + N C C+ M NG C P
Sbjct: 295 CKCSDGYEGNPYVKDGCKDINECLDNATYPCPGICKNTLGNFTCSCYPGNYMMNGICIP 353
>07_03_1583 -
27898375-27898436,27898455-27898539,27898621-27898768,
27899009-27899028,27899135-27899236,27899743-27899812,
27899956-27900012,27902324-27902484,27902742-27902761,
27902997-27903069,27903077-27903169,27903456-27903496,
27903597-27903858
Length = 397
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/51 (31%), Positives = 29/51 (56%)
Frame = +3
Query: 336 IMQDWLDIRGEDRQLCTEMHERVRERNLRGARGVHLSRASGPQTRTLRGAH 488
I+ DW+D ++R + +MH E+ L+G+ GV L+ + +TR + H
Sbjct: 133 IVTDWVDY--QNRLVRGDMHS---EKPLKGSGGVSLANGNTTETRLRKRCH 178
>07_03_1736 +
29130118-29130294,29130649-29130703,29130837-29131048,
29131201-29131322,29131406-29131559,29131849-29131918,
29132007-29132152,29132238-29132310,29132366-29132418,
29132514-29132658,29132945-29133063,29133171-29133242,
29133336-29133439,29133695-29133751,29133861-29134059,
29134169-29134312,29134418-29134537
Length = 673
Score = 23.8 bits (49), Expect(2) = 6.9
Identities = 10/31 (32%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -3
Query: 300 NARTAVSLAATSFLIVDQTSALPYDRYV-HG 211
N+R ++ + + + +DQ S +P D Y+ HG
Sbjct: 213 NSRLQLTTSKSGVIWLDQVSVMPSDTYMGHG 243
Score = 23.0 bits (47), Expect(2) = 6.9
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3
Query: 102 FRRDRLQSLSQLKPQF 55
FR+D L+ LKPQF
Sbjct: 244 FRKDLASMLANLKPQF 259
>04_04_1335 -
32730516-32730570,32730655-32731154,32731235-32731416,
32732673-32732779,32733364-32733395,32733499-32733542,
32733816-32733977,32734356-32734755
Length = 493
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +1
Query: 91 IASEREHRAMLCGNVLSVLLFVIGERSLFCDAIKDGK 201
+A + HR L +VLSV +F + DAIK GK
Sbjct: 421 VADQVGHRVRLSPSVLSVFVFSSAAIAFTYDAIKSGK 457
>04_04_1268 -
32262994-32263017,32263411-32263488,32263653-32263800,
32263890-32264127,32264210-32264420,32264499-32264680,
32264765-32264866,32265009-32266317,32266906-32266988,
32267436-32267559
Length = 832
Score = 28.3 bits (60), Expect = 8.2
Identities = 30/103 (29%), Positives = 38/103 (36%), Gaps = 10/103 (9%)
Frame = +1
Query: 484 PTCSPACDSYSSCTDFNVCTCVNNTIALNGSQCAPVCPDGYYNDPVECSPRCE-----RC 648
P CD Y SC F C + T + Q CPDG+ + S C RC
Sbjct: 364 PAAIGDCDPYGSCGPFGYC---DFTSVIPRCQ----CPDGFEPNGSNSSSGCRRKQQLRC 416
Query: 649 VNGT--CTEPGLCTCDSGYKNID---DVCVPQCLDXRNGECVA 762
G T PG+ D + D + C +C RN C A
Sbjct: 417 GEGNHFMTMPGMKLPDKFFYVQDRSFEECAAEC--SRNCSCTA 457
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,116,488
Number of Sequences: 37544
Number of extensions: 453027
Number of successful extensions: 1325
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1269
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1322
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2362209084
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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