Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_FL5_A24
(940 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 42 6e-06
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 40 2e-05
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 40 2e-05
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 40 4e-05
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 39 6e-05
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 39 6e-05
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 39 8e-05
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 39 8e-05
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 38 1e-04
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 38 1e-04
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 38 1e-04
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 38 2e-04
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 37 2e-04
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 37 3e-04
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 37 3e-04
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 37 3e-04
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 36 5e-04
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 35 0.001
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 35 0.001
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 35 0.001
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 35 0.001
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 35 0.001
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 33 0.005
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 33 0.005
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 33 0.005
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 32 0.007
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 31 0.011
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 29 0.046
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 25 0.99
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 22 9.2
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 22 9.2
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 22 9.2
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 22 9.2
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 42.3 bits (95), Expect = 6e-06
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = +3
Query: 399 ERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSXIXRLDISTPISMQLXNWPNDXQ 569
ER+WRPD N + + R+S +G + RL I M+L N+P D Q
Sbjct: 115 ERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFPMDRQ 174
Query: 570 TCXFXFGS 593
+C GS
Sbjct: 175 SCPLILGS 182
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 40.3 bits (90), Expect = 2e-05
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Frame = +3
Query: 399 ERLWRPDVVLLNAAATTAGDYALRAR----VSNNGSVSXIXRLDISTPISMQLXNWPNDX 566
+++W+PD+VL N A G+Y +R + + NG V + + ++ + +P D
Sbjct: 106 DKVWKPDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQ 162
Query: 567 QTCXFXFGSTMHTXDQ 614
QTC FGS DQ
Sbjct: 163 QTCIMKFGSWTFNGDQ 178
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 40.3 bits (90), Expect = 2e-05
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Frame = +3
Query: 390 VSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSXIXRLDISTPISMQLXNWPN 560
V S+ +W PD+ + N+ T G V ++GSVS + + + +WP
Sbjct: 119 VKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPY 178
Query: 561 DXQTCXFXFGSTMHTXDQ 614
D C FGS +H+ ++
Sbjct: 179 DTHRCRINFGSWVHSGEE 196
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 39.5 bits (88), Expect = 4e-05
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +3
Query: 390 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSXIXRLDISTPISMQLXNWPNDX 566
+ RLW+PDV++ N+A G Y V NNG+ + + + + +P D
Sbjct: 100 IPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPFDD 159
Query: 567 QTCXFXFGS 593
Q C FGS
Sbjct: 160 QRCEMKFGS 168
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 39.1 bits (87), Expect = 6e-05
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +3
Query: 390 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSXIXRLDISTPISMQLXNWPNDX 566
++ +LW+PD+++ N+A G Y V++NGS + + + + +P D
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 190
Query: 567 QTCXFXFGSTMHTXDQ 614
Q C FGS + +Q
Sbjct: 191 QHCDMKFGSWTYDGNQ 206
Score = 23.8 bits (49), Expect = 2.3
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = +2
Query: 281 IRESESTVRILAHLQMNWIDKRLSWN 358
+ E + A L++ W+D L WN
Sbjct: 94 VDEKNQILTTNAWLKLEWVDYNLQWN 119
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 39.1 bits (87), Expect = 6e-05
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +3
Query: 390 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSXIXRLDISTPISMQLXNWPNDX 566
++ +LW+PD+++ N+A G Y V++NGS + + + + +P D
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 190
Query: 567 QTCXFXFGSTMHTXDQ 614
Q C FGS + +Q
Sbjct: 191 QHCDMKFGSWTYDGNQ 206
Score = 23.8 bits (49), Expect = 2.3
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = +2
Query: 281 IRESESTVRILAHLQMNWIDKRLSWN 358
+ E + A L++ W+D L WN
Sbjct: 94 VDEKNQILTTNAWLKLEWVDYNLQWN 119
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 38.7 bits (86), Expect = 8e-05
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +3
Query: 390 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSXIXRLDISTPISMQLXNWPNDX 566
++ +LW+PD+++ N+A G Y V++NGS + + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 122
Query: 567 QTCXFXFGSTMHTXDQ 614
Q C FGS + +Q
Sbjct: 123 QHCDMKFGSWTYDGNQ 138
Score = 23.8 bits (49), Expect = 2.3
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = +2
Query: 281 IRESESTVRILAHLQMNWIDKRLSWN 358
+ E + A L++ W+D L WN
Sbjct: 26 VDEKNQILTTNAWLKLEWVDYNLQWN 51
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 38.7 bits (86), Expect = 8e-05
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +3
Query: 390 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSXIXRLDISTPISMQLXNWPNDX 566
V S+ +WRPD+VL NA A +A + + G V + + + +P D
Sbjct: 105 VPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDE 164
Query: 567 QTCXFXFGS 593
QTC FGS
Sbjct: 165 QTCVLKFGS 173
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 38.3 bits (85), Expect = 1e-04
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +3
Query: 390 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSXIXRLDISTPISMQLXNWPNDX 566
++ +LW+PD+++ N+A G Y V+++GS + + M + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDD 122
Query: 567 QTCXFXFGSTMHTXDQ 614
Q C FGS + +Q
Sbjct: 123 QHCDMKFGSWTYDGNQ 138
Score = 23.8 bits (49), Expect = 2.3
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = +2
Query: 281 IRESESTVRILAHLQMNWIDKRLSWN 358
+ E + A L++ W+D L WN
Sbjct: 26 VDEKNQILTTNAWLKLEWVDYNLQWN 51
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 38.3 bits (85), Expect = 1e-04
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +3
Query: 390 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSXIXRLDISTPISMQLXNWPNDX 566
V S+ +WRPD+VL NA A +A ++ G V + + + +P D
Sbjct: 101 VPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCEIDVEYFPFDE 160
Query: 567 QTCXFXFGS 593
QTC FGS
Sbjct: 161 QTCVMKFGS 169
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 37.9 bits (84), Expect = 1e-04
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +3
Query: 390 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSXIXRLDISTPISMQLXNWPNDX 566
++ +LW+PD+++ N+A G Y V+++GS + + M + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDD 122
Query: 567 QTCXFXFGSTMHTXDQ 614
Q C FGS + +Q
Sbjct: 123 QHCDMKFGSWTYDGNQ 138
Score = 23.8 bits (49), Expect = 2.3
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = +2
Query: 281 IRESESTVRILAHLQMNWIDKRLSWN 358
+ E + A L++ W+D L WN
Sbjct: 26 VDEKNQILTTNAWLKLEWVDYNLQWN 51
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 37.5 bits (83), Expect = 2e-04
Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = +3
Query: 366 EWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNGSVSXIXRLDISTPISM 539
E+G T L V SE +W PD+VL N A G + +A + G V + +
Sbjct: 88 EYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEI 147
Query: 540 QLXNWPNDXQTCXFXFGS 593
+ +P D QTC FGS
Sbjct: 148 DVRYFPFDQQTCFMKFGS 165
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 37.1 bits (82), Expect = 2e-04
Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
Frame = +3
Query: 402 RLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSXIXRLDISTPISMQLXNWPNDXQT 572
R+W+PD N + T R+ +G V RL I M L N+P D Q
Sbjct: 84 RIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQR 143
Query: 573 CXFXFGSTMHT 605
C FGS +T
Sbjct: 144 CPLQFGSFGYT 154
Score = 24.2 bits (50), Expect = 1.7
Identities = 8/28 (28%), Positives = 17/28 (60%)
Frame = +2
Query: 281 IRESESTVRILAHLQMNWIDKRLSWNAG 364
I E + T + + + +W+D+RL++ G
Sbjct: 44 ISEVDMTYSMDCYFRQSWVDRRLAFQGG 71
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 36.7 bits (81), Expect = 3e-04
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +3
Query: 390 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSXIXRLDISTPISMQLXNWPNDX 566
++ +LW+PD+++ N+A G Y V+++GS + + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDD 122
Query: 567 QTCXFXFGSTMHTXDQ 614
Q C FGS + +Q
Sbjct: 123 QHCDMKFGSWTYDGNQ 138
Score = 23.8 bits (49), Expect = 2.3
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = +2
Query: 281 IRESESTVRILAHLQMNWIDKRLSWN 358
+ E + A L++ W+D L WN
Sbjct: 26 VDEKNQILTTNAWLKLEWVDYNLQWN 51
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 36.7 bits (81), Expect = 3e-04
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +3
Query: 390 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSXIXRLDISTPISMQLXNWPNDX 566
++ +LW+PD+++ N+A G Y V+++GS + + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDD 122
Query: 567 QTCXFXFGSTMHTXDQ 614
Q C FGS + +Q
Sbjct: 123 QHCDMKFGSWTYDGNQ 138
Score = 23.8 bits (49), Expect = 2.3
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = +2
Query: 281 IRESESTVRILAHLQMNWIDKRLSWN 358
+ E + A L++ W+D L WN
Sbjct: 26 VDEKNQILTTNAWLKLEWVDYNLQWN 51
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 36.7 bits (81), Expect = 3e-04
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +3
Query: 390 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSXIXRLDISTPISMQLXNWPNDX 566
++ +LW+PD+++ N+A G Y V+++GS + + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDD 122
Query: 567 QTCXFXFGSTMHTXDQ 614
Q C FGS + +Q
Sbjct: 123 QHCDMKFGSWTYDGNQ 138
Score = 23.8 bits (49), Expect = 2.3
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = +2
Query: 281 IRESESTVRILAHLQMNWIDKRLSWN 358
+ E + A L++ W+D L WN
Sbjct: 26 VDEKNQILTTNAWLKLEWVDYNLQWN 51
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 35.9 bits (79), Expect = 5e-04
Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Frame = +3
Query: 372 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSXIXRLDISTPISM 539
G V SE +W PD+VL N A G+Y + +A + G VS + +
Sbjct: 104 GVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSWKPPAIYKSSCEI 160
Query: 540 QLXNWPNDXQTCXFXFGSTMHTXDQ 614
+ +P D Q+C FGS + Q
Sbjct: 161 NVEYFPFDEQSCIMKFGSWTYNGAQ 185
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 35.1 bits (77), Expect = 0.001
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Frame = +3
Query: 390 VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSXIXRLDISTPISMQLXNWP 557
V S+ +WRPD+VL N A G+Y + +A V +G V + S+ + +P
Sbjct: 105 VPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFP 161
Query: 558 NDXQTCXFXFGS 593
D QTC GS
Sbjct: 162 YDVQTCVLKLGS 173
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 35.1 bits (77), Expect = 0.001
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Frame = +3
Query: 372 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSXIXRLDISTPISM 539
G T V SE +W PD+VL N A G+Y + +A + + G V + +
Sbjct: 91 GVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEI 147
Query: 540 QLXNWPNDXQTCXFXFGS 593
+ +P D QTC FGS
Sbjct: 148 DVEYFPFDEQTCFMKFGS 165
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 34.7 bits (76), Expect = 0.001
Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 12/88 (13%)
Frame = +3
Query: 372 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSXIXRLDIS 524
G T V SE +W PD +N ATT+ ++ R+ ++GS++ RL I+
Sbjct: 79 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 135
Query: 525 TPISMQLXNWPNDXQTCXF---XFGSTM 599
M L +P D Q C FG TM
Sbjct: 136 ASCPMNLQYFPMDRQLCHIEIESFGYTM 163
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 34.7 bits (76), Expect = 0.001
Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 12/88 (13%)
Frame = +3
Query: 372 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSXIXRLDIS 524
G T V SE +W PD +N ATT+ ++ R+ ++GS++ RL I+
Sbjct: 79 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 135
Query: 525 TPISMQLXNWPNDXQTCXF---XFGSTM 599
M L +P D Q C FG TM
Sbjct: 136 ASCPMNLQYFPMDRQLCHIEIESFGYTM 163
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 34.7 bits (76), Expect = 0.001
Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 12/88 (13%)
Frame = +3
Query: 372 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSXIXRLDIS 524
G T V SE +W PD +N ATT+ ++ R+ ++GS++ RL I+
Sbjct: 18 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 74
Query: 525 TPISMQLXNWPNDXQTCXF---XFGSTM 599
M L +P D Q C FG TM
Sbjct: 75 ASCPMNLQYFPMDRQLCHIEIESFGYTM 102
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 32.7 bits (71), Expect = 0.005
Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 3/78 (3%)
Frame = +3
Query: 399 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSXIXRLDISTPISMQLXNWPNDXQ 569
+ +WRPD NA + T + + + ++ + +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 570 TCXFXFGSTMHTXDQTGF 623
C S HT D+ F
Sbjct: 176 ECKLQMESLSHTTDEMIF 193
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 32.7 bits (71), Expect = 0.005
Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 3/82 (3%)
Frame = +3
Query: 387 LVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSXIXRLDISTPISMQLXNWP 557
L + R+W PD+ N + + R+ NGSV R+ ++ M L +P
Sbjct: 109 LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYP 168
Query: 558 NDXQTCXFXFGSTMHTXDQTGF 623
D Q C S T D F
Sbjct: 169 LDRQVCSLRMASYGWTTDDLVF 190
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 32.7 bits (71), Expect = 0.005
Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 3/82 (3%)
Frame = +3
Query: 387 LVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSXIXRLDISTPISMQLXNWP 557
L + R+W PD+ N + + R+ NGSV R+ ++ M L +P
Sbjct: 109 LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYP 168
Query: 558 NDXQTCXFXFGSTMHTXDQTGF 623
D Q C S T D F
Sbjct: 169 LDRQVCSLRMASYGWTTDDLVF 190
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 32.3 bits (70), Expect = 0.007
Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Frame = +3
Query: 396 SERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSXIXRLDISTPISMQLXNWPNDX 566
+E++W PD N + D R R+S +GSV+ R + M L +P D
Sbjct: 113 AEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDS 172
Query: 567 QTCXFXFGSTMHT 605
Q C S +T
Sbjct: 173 QNCTVEIESYGYT 185
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 31.5 bits (68), Expect = 0.011
Identities = 17/76 (22%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = +3
Query: 405 LWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSXIXRLDISTPISMQLXNWPNDXQTC 575
+WRPD NA T + ++ + ++ ++ + +L + +M+ ++P+D Q C
Sbjct: 87 IWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQIC 146
Query: 576 XFXFGSTMHTXDQTGF 623
S HT F
Sbjct: 147 SMMIESLSHTTQDLVF 162
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 29.5 bits (63), Expect = 0.046
Identities = 18/70 (25%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
Frame = +3
Query: 390 VSSERLWRPDVVLLNAAATTAGDYALRAR--VSNNGSVSXIXRLDISTPISMQLXNWPND 563
V R+WRPD +L N A + VS+ G V + + + + +P D
Sbjct: 82 VPYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFD 141
Query: 564 XQTCXFXFGS 593
Q C + S
Sbjct: 142 EQRCVLKWAS 151
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 25.0 bits (52), Expect = 0.99
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 5/64 (7%)
Frame = +3
Query: 399 ERLWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSXIXRLDISTPISMQLXNWPND 563
+ LW+PD LNA + AL + S+ N +V R+ M+ +P D
Sbjct: 69 DSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMD 126
Query: 564 XQTC 575
Q C
Sbjct: 127 IQIC 130
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.8 bits (44), Expect = 9.2
Identities = 11/40 (27%), Positives = 18/40 (45%)
Frame = +3
Query: 474 RVSNNGSVSXIXRLDISTPISMQLXNWPNDXQTCXFXFGS 593
R+ NG+V+ + R + +L +P D C F S
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.8 bits (44), Expect = 9.2
Identities = 11/40 (27%), Positives = 18/40 (45%)
Frame = +3
Query: 474 RVSNNGSVSXIXRLDISTPISMQLXNWPNDXQTCXFXFGS 593
R+ NG+V+ + R + +L +P D C F S
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.8 bits (44), Expect = 9.2
Identities = 11/40 (27%), Positives = 18/40 (45%)
Frame = +3
Query: 474 RVSNNGSVSXIXRLDISTPISMQLXNWPNDXQTCXFXFGS 593
R+ NG+V+ + R + +L +P D C F S
Sbjct: 218 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 257
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.8 bits (44), Expect = 9.2
Identities = 11/40 (27%), Positives = 18/40 (45%)
Frame = +3
Query: 474 RVSNNGSVSXIXRLDISTPISMQLXNWPNDXQTCXFXFGS 593
R+ NG+V+ + R + +L +P D C F S
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,601
Number of Sequences: 438
Number of extensions: 4838
Number of successful extensions: 59
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30718506
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -