Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_FL5_A23
(905 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 68 1e-13
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 65 7e-13
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 64 2e-12
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 62 7e-12
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 62 7e-12
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 62 9e-12
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 62 9e-12
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 61 1e-11
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 61 2e-11
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 61 2e-11
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 60 2e-11
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 60 4e-11
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 60 4e-11
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 59 5e-11
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 59 5e-11
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 58 8e-11
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 58 8e-11
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 57 2e-10
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 56 3e-10
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 54 1e-09
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 54 2e-09
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 50 3e-08
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 47 2e-07
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 47 3e-07
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 46 6e-07
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 41 1e-05
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 37 3e-04
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 36 4e-04
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 36 4e-04
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 36 4e-04
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 34 0.002
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 33 0.003
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 32 0.006
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 29 0.058
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 5.1
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 68.1 bits (159), Expect = 1e-13
Identities = 51/168 (30%), Positives = 75/168 (44%), Gaps = 9/168 (5%)
Frame = +2
Query: 68 ITSAAECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA---NIRESEST 226
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 227 VRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTXGDYAL-RAR 400
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 401 VSNNGSVSWIKRLDISTPIXMQLDNWPNDMQTCTFKFGSRMHXSDEMD 544
+ G V W + + + +P D QTC KFGS + ++D
Sbjct: 127 LHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDGIQID 174
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 65.3 bits (152), Expect = 7e-13
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 7/149 (4%)
Frame = +2
Query: 92 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 259
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 260 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TXGDYALRARVSNNGSVSWI 430
+D+RL++ G+ + + R+W+PD N + T R+ +G V +
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 431 KRLDISTPIXMQLDNWPNDMQTCTFKFGS 517
RL I M L+N+P D Q C +FGS
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 63.7 bits (148), Expect = 2e-12
Identities = 42/162 (25%), Positives = 73/162 (45%), Gaps = 9/162 (5%)
Frame = +2
Query: 86 CENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQAD 244
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 245 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTXGDYALRARVSNNGS 418
++ +W D +L W+ E+G L V S+ +WRPD+VL N A A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 419 VSWIKRLDISTPIXMQLDNWPNDMQTCTFKFGSRMHXSDEMD 544
V W + + ++ +P D QTC KFGS + ++D
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVD 178
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 62.1 bits (144), Expect = 7e-12
Identities = 32/116 (27%), Positives = 59/116 (50%), Gaps = 2/116 (1%)
Frame = +2
Query: 203 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTX- 376
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 377 GDYALRARVSNNGSVSWIKRLDISTPIXMQLDNWPNDMQTCTFKFGSRMHXSDEMD 544
G Y V++NGS ++ + + + +P D Q C KFGS + +++D
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 208
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 62.1 bits (144), Expect = 7e-12
Identities = 32/116 (27%), Positives = 59/116 (50%), Gaps = 2/116 (1%)
Frame = +2
Query: 203 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTX- 376
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 377 GDYALRARVSNNGSVSWIKRLDISTPIXMQLDNWPNDMQTCTFKFGSRMHXSDEMD 544
G Y V++NGS ++ + + + +P D Q C KFGS + +++D
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 208
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 61.7 bits (143), Expect = 9e-12
Identities = 31/116 (26%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
Frame = +2
Query: 203 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTX 376
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 377 GDYALRARVSNNGSVSWIKRLDISTPIXMQLDNWPNDMQTCTFKFGSRMHXSDEMD 544
G Y V++NGS ++ + + + +P D Q C KFGS + +++D
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 140
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 61.7 bits (143), Expect = 9e-12
Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 6/132 (4%)
Frame = +2
Query: 164 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 337
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 338 PDVVLLNAAATTXGDYALRAR----VSNNGSVSWIKRLDISTPIXMQLDNWPNDMQTCTF 505
PD+VL N A G+Y +R + + NG V W+ + + + +P D QTC
Sbjct: 111 PDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 506 KFGSRMHXSDEM 541
KFGS D++
Sbjct: 168 KFGSWTFNGDQV 179
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 61.3 bits (142), Expect = 1e-11
Identities = 45/156 (28%), Positives = 71/156 (45%), Gaps = 12/156 (7%)
Frame = +2
Query: 113 MIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQADLQMNWIDKR 271
+ D LL+ Y+R P LT+ L N++ T + ++ W D +
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVW--VEQRWNDYK 94
Query: 272 LSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTXGDYAL----RARVSNNGSVSWIKR 436
L WN E+G L V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 95 LKWNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSWKPP 151
Query: 437 LDISTPIXMQLDNWPNDMQTCTFKFGSRMHXSDEMD 544
+ + ++ +P D Q+C KFGS + ++D
Sbjct: 152 AIYKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 60.9 bits (141), Expect = 2e-11
Identities = 31/116 (26%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
Frame = +2
Query: 203 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTX 376
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 377 GDYALRARVSNNGSVSWIKRLDISTPIXMQLDNWPNDMQTCTFKFGSRMHXSDEMD 544
G Y V+++GS ++ + M + +P D Q C KFGS + +++D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVD 140
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 60.9 bits (141), Expect = 2e-11
Identities = 40/151 (26%), Positives = 73/151 (48%), Gaps = 7/151 (4%)
Frame = +2
Query: 113 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 277
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 278 WNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTXGDYALRARVSNNGSVSWIKRLDIST 451
W E+G L V S+ +WRPD+VL N A A +A + + G V W +
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKS 151
Query: 452 PIXMQLDNWPNDMQTCTFKFGSRMHXSDEMD 544
+ ++ +P D QTC KFGS + ++D
Sbjct: 152 SCEIDVEYFPFDEQTCVLKFGSWTYDGFKVD 182
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 60.5 bits (140), Expect = 2e-11
Identities = 31/116 (26%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
Frame = +2
Query: 203 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTX 376
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 377 GDYALRARVSNNGSVSWIKRLDISTPIXMQLDNWPNDMQTCTFKFGSRMHXSDEMD 544
G Y V+++GS ++ + M + +P D Q C KFGS + +++D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 59.7 bits (138), Expect = 4e-11
Identities = 30/116 (25%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
Frame = +2
Query: 203 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTX 376
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 377 GDYALRARVSNNGSVSWIKRLDISTPIXMQLDNWPNDMQTCTFKFGSRMHXSDEMD 544
G Y V+++GS ++ + + + +P D Q C KFGS + +++D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 140
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 59.7 bits (138), Expect = 4e-11
Identities = 43/162 (26%), Positives = 76/162 (46%), Gaps = 10/162 (6%)
Frame = +2
Query: 86 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 250
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 251 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL--LNAAATTXGDYALRARVSNNGSV 421
+ W L+W + E+ ++ V S +W PD+V+ + + ++ V N+G++
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTI 147
Query: 422 SWIKRLDISTPIXMQLDN--WPNDMQTCTFKFGSRMHXSDEM 541
+ TP+ + D+ WP D+ CT S H S+E+
Sbjct: 148 LCVP-FTTYTPV-CEYDHTWWPYDILNCTIHIASWSHGSNEI 187
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 59.3 bits (137), Expect = 5e-11
Identities = 30/116 (25%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
Frame = +2
Query: 203 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTX 376
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 377 GDYALRARVSNNGSVSWIKRLDISTPIXMQLDNWPNDMQTCTFKFGSRMHXSDEMD 544
G Y V+++GS ++ + + + +P D Q C KFGS + +++D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 59.3 bits (137), Expect = 5e-11
Identities = 30/116 (25%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
Frame = +2
Query: 203 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTX 376
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 377 GDYALRARVSNNGSVSWIKRLDISTPIXMQLDNWPNDMQTCTFKFGSRMHXSDEMD 544
G Y V+++GS ++ + + + +P D Q C KFGS + +++D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVD 140
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 58.4 bits (135), Expect = 8e-11
Identities = 41/165 (24%), Positives = 74/165 (44%), Gaps = 8/165 (4%)
Frame = +2
Query: 89 ENATSLSLMIDSLLATYDRDSPPDS--KIVVNLTLHL--RHANIRESESTVRIQADLQMN 256
++ T+L + L YD + P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 257 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATTXGDYAL---RARVSNNGSVS 424
W D LSW ++ G + V S+ +W PD+ + N+ T + V ++GSVS
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
Query: 425 WIKRLDISTPIXMQLDNWPNDMQTCTFKFGSRMHXSDEMDS*LTK 559
+ + +WP D C FGS +H +E++ L K
Sbjct: 159 CVPSVKHVAKCATDFSSWPYDTHRCRINFGSWVHSGEEVNIFLDK 203
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 58.4 bits (135), Expect = 8e-11
Identities = 43/147 (29%), Positives = 69/147 (46%), Gaps = 12/147 (8%)
Frame = +2
Query: 113 MIDSLLATYDRDSPP----DSKIVVNLTLHLRH---ANIRESESTVRIQADLQMNWIDKR 271
+ D LL+ Y+R P ++ V + L L N++ T + ++ W D +
Sbjct: 24 LYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYK 81
Query: 272 LSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTXGDYAL----RARVSNNGSVSWIKR 436
L WN ++G T V SE +W PD+VL N A G+Y + +A + + G V W
Sbjct: 82 LKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPP 138
Query: 437 LDISTPIXMQLDNWPNDMQTCTFKFGS 517
+ + ++ +P D QTC KFGS
Sbjct: 139 AIYKSFCEIDVEYFPFDEQTCFMKFGS 165
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 57.2 bits (132), Expect = 2e-10
Identities = 41/154 (26%), Positives = 76/154 (49%), Gaps = 10/154 (6%)
Frame = +2
Query: 113 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 277
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 278 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTXGDYAL----RARVSNNGSVSWIKRLD 442
W E+G L V S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAV 148
Query: 443 ISTPIXMQLDNWPNDMQTCTFKFGSRMHXSDEMD 544
+ + ++ +P D+QTC K GS + ++D
Sbjct: 149 YKSSCSIDVEFFPYDVQTCVLKLGSWTYDGFKVD 182
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 56.4 bits (130), Expect = 3e-10
Identities = 39/151 (25%), Positives = 69/151 (45%), Gaps = 7/151 (4%)
Frame = +2
Query: 113 MIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 277
+++ LL TY+ P +V++ L L ++ E + L++ W D +
Sbjct: 27 LLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLLITNLWLKLEWNDVNMR 86
Query: 278 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTX-GDYALRARVSNNGSVSWIKRLDIST 451
WN ++G L + RLW+PDV++ N+A G Y V NNG+ ++ +
Sbjct: 87 WNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYVPPGIFKS 146
Query: 452 PIXMQLDNWPNDMQTCTFKFGSRMHXSDEMD 544
+ + +P D Q C KFGS + ++D
Sbjct: 147 TCKIDITWFPFDDQRCEMKFGSWTYDGFQLD 177
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 54.4 bits (125), Expect = 1e-09
Identities = 33/120 (27%), Positives = 51/120 (42%), Gaps = 3/120 (2%)
Frame = +2
Query: 167 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 343
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 344 VVLLNAAATTXGDYALRARV--SNNGSVSWIKRLDISTPIXMQLDNWPNDMQTCTFKFGS 517
+L N A + V S+ G V W+ + + ++ +P D Q C K+ S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 54.0 bits (124), Expect = 2e-09
Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 8/147 (5%)
Frame = +2
Query: 101 SLSLMIDSLLATYDRDSPPD----SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNWID 265
++++++++LL Y+ + P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 266 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTXGDYALR---ARVSNNGSVSWIKR 436
RLS+ S + ER+WRPD N + + R+S +G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 437 LDISTPIXMQLDNWPNDMQTCTFKFGS 517
L I M+L N+P D Q+C GS
Sbjct: 156 LTIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 50.0 bits (114), Expect = 3e-08
Identities = 39/155 (25%), Positives = 69/155 (44%), Gaps = 12/155 (7%)
Frame = +2
Query: 113 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 271
++D++L YD P D +V + L +R A I + + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 272 LSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTXGDYALR---ARVSNNGSVSWIKR 436
L +N G T L + R+W PD+ N + + R+ NGSV + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 437 LDISTPIXMQLDNWPNDMQTCTFKFGSRMHXSDEM 541
+ ++ M L +P D Q C+ + S +D++
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDL 188
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 47.2 bits (107), Expect = 2e-07
Identities = 38/155 (24%), Positives = 68/155 (43%), Gaps = 12/155 (7%)
Frame = +2
Query: 113 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 271
++D++L YD P D VV + + +R + I + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 272 LSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTXGDYALR---ARVSNNGSVSWIKR 436
L +N G T L + R+W PD+ N + + R+ NGSV + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 437 LDISTPIXMQLDNWPNDMQTCTFKFGSRMHXSDEM 541
+ ++ M L +P D Q C+ + S +D++
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDL 188
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 46.8 bits (106), Expect = 3e-07
Identities = 41/162 (25%), Positives = 72/162 (44%), Gaps = 13/162 (8%)
Frame = +2
Query: 71 TSAAECENATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLH-LRHANIRESESTVRIQ 238
T N ++S ++DS +YD+ P+ + V +T++ L +++ E + +
Sbjct: 1 TGGGSMLNDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLD 60
Query: 239 ADLQMNWIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTXGDYAL 391
+ W D RL++ G T V SE +W PD +N ATT ++
Sbjct: 61 FYFRQFWTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI- 118
Query: 392 RARVSNNGSVSWIKRLDISTPIXMQLDNWPNDMQTCTFKFGS 517
R+ ++GS++ RL I+ M L +P D Q C + S
Sbjct: 119 --RIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 45.6 bits (103), Expect = 6e-07
Identities = 41/162 (25%), Positives = 71/162 (43%), Gaps = 13/162 (8%)
Frame = +2
Query: 71 TSAAECENATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLH-LRHANIRESESTVRIQ 238
T N ++S ++DS +YD+ P+ + V +T++ L +++ E +
Sbjct: 1 TGGGSMLNDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLD 60
Query: 239 ADLQMNWIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTXGDYAL 391
+ W D RL++ G T V SE +W PD +N ATT ++
Sbjct: 61 FYFRQFWTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI- 118
Query: 392 RARVSNNGSVSWIKRLDISTPIXMQLDNWPNDMQTCTFKFGS 517
R+ ++GS++ RL I+ M L +P D Q C + S
Sbjct: 119 --RIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 41.1 bits (92), Expect = 1e-05
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 3/107 (2%)
Frame = +2
Query: 206 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTXGDY 385
I E I L W D+RL+++ E + +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 386 ALR---ARVSNNGSVSWIKRLDISTPIXMQLDNWPNDMQTCTFKFGS 517
R R+S +GSV++ R + M L +P D Q CT + S
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIES 181
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 36.7 bits (81), Expect = 3e-04
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 9/96 (9%)
Frame = +2
Query: 257 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTXGDYALRARVSN 409
W D RL++ G T V SE +W PD +N ATT ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 410 NGSVSWIKRLDISTPIXMQLDNWPNDMQTCTFKFGS 517
+GS++ RL I+ M L +P D Q C + S
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 97
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 36.3 bits (80), Expect = 4e-04
Identities = 36/151 (23%), Positives = 66/151 (43%), Gaps = 8/151 (5%)
Frame = +2
Query: 89 ENATSLSLMIDSLLAT--YDRD--SPPDSKIVVNLT-LHLRHANIRESESTVRIQADLQM 253
E+ S ++D+LL + YD+ P + VN++ L L A+ ES ++ LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 254 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTXGDYALRARVSNNGSVS 424
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 425 WIKRLDISTPIXMQLDNWPNDMQTCTFKFGS 517
++ R + +L+ +P D C+F S
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 36.3 bits (80), Expect = 4e-04
Identities = 36/151 (23%), Positives = 66/151 (43%), Gaps = 8/151 (5%)
Frame = +2
Query: 89 ENATSLSLMIDSLLAT--YDRD--SPPDSKIVVNLT-LHLRHANIRESESTVRIQADLQM 253
E+ S ++D+LL + YD+ P + VN++ L L A+ ES ++ LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 254 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTXGDYALRARVSNNGSVS 424
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 425 WIKRLDISTPIXMQLDNWPNDMQTCTFKFGS 517
++ R + +L+ +P D C+F S
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 36.3 bits (80), Expect = 4e-04
Identities = 36/151 (23%), Positives = 66/151 (43%), Gaps = 8/151 (5%)
Frame = +2
Query: 89 ENATSLSLMIDSLLAT--YDRD--SPPDSKIVVNLT-LHLRHANIRESESTVRIQADLQM 253
E+ S ++D+LL + YD+ P + VN++ L L A+ ES ++ LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 254 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTXGDYALRARVSNNGSVS 424
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 425 WIKRLDISTPIXMQLDNWPNDMQTCTFKFGS 517
++ R + +L+ +P D C+F S
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 34.3 bits (75), Expect = 0.002
Identities = 25/118 (21%), Positives = 50/118 (42%), Gaps = 5/118 (4%)
Frame = +2
Query: 203 NIRESESTVRIQADLQMNWIDKRLSW--NAGEWGCSTWLVSSERLWRPDVVLLNAAATTX 376
+I E T L +W D RL N E + +WRPD NA T
Sbjct: 43 SINEESMTYVADIFLAQSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTF 102
Query: 377 GDYALRAR---VSNNGSVSWIKRLDISTPIXMQLDNWPNDMQTCTFKFGSRMHXSDEM 541
+ ++ + ++ ++ ++ +L + M+ +++P+D Q C+ S H + ++
Sbjct: 103 HEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDL 160
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 33.5 bits (73), Expect = 0.003
Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = +2
Query: 323 ERLWRPDVVLLNAAATTXGDYALRAR---VSNNGSVSWIKRLDISTPIXMQLDNWPNDMQ 493
+ +WRPD NA + T + + + ++ ++ +L + M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 494 TCTFKFGSRMHXSDEM 541
C + S H +DEM
Sbjct: 176 ECKLQMESLSHTTDEM 191
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 32.3 bits (70), Expect = 0.006
Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 4/121 (3%)
Frame = +2
Query: 167 IVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRP 340
+ VN++ L L A+ ES ++ LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 341 DV--VLLNAAATTXGDYALRARVSNNGSVSWIKRLDISTPIXMQLDNWPNDMQTCTFKFG 514
D ++ R+ NG+V+++ R + +L+ +P D C+F
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIE 256
Query: 515 S 517
S
Sbjct: 257 S 257
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 29.1 bits (62), Expect = 0.058
Identities = 27/122 (22%), Positives = 52/122 (42%), Gaps = 11/122 (9%)
Frame = +2
Query: 167 IVVNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 328
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 329 LWRPDVVLLNAAATTXGDYALRARVSN-----NGSVSWIKRLDISTPIXMQLDNWPNDMQ 493
LW+PD LNA + AL + S+ N +V + R+ M+ +P D+Q
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 494 TC 499
C
Sbjct: 129 IC 130
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 5.1
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 310 PSAAAPLPCVPTQS 269
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 223,526
Number of Sequences: 438
Number of extensions: 4661
Number of successful extensions: 92
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29388177
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -