BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_FL5_A07
(1040 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF010404-1|AAC51735.1| 4957|Homo sapiens ALR protein. 32 3.0
AF010403-1|AAC51734.1| 5262|Homo sapiens ALR protein. 32 3.0
>AF010404-1|AAC51735.1| 4957|Homo sapiens ALR protein.
Length = 4957
Score = 32.3 bits (70), Expect = 3.0
Identities = 14/45 (31%), Positives = 18/45 (40%)
Frame = +2
Query: 185 GKKPQNSPXAPXLNXXPPPXPKVXKTGEFXPPRXPKXFFXTPXPP 319
G +PQ P A L PP P + + G + P P PP
Sbjct: 1766 GLRPQEPPPAQALAPSPPSHPDIFRPGSYTDPYAQPPLTPRPQPP 1810
>AF010403-1|AAC51734.1| 5262|Homo sapiens ALR protein.
Length = 5262
Score = 32.3 bits (70), Expect = 3.0
Identities = 14/45 (31%), Positives = 18/45 (40%)
Frame = +2
Query: 185 GKKPQNSPXAPXLNXXPPPXPKVXKTGEFXPPRXPKXFFXTPXPP 319
G +PQ P A L PP P + + G + P P PP
Sbjct: 2071 GLRPQEPPPAQALAPSPPSHPDIFRPGSYTDPYAQPPLTPRPQPP 2115
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,211,075
Number of Sequences: 237096
Number of extensions: 1258824
Number of successful extensions: 5881
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5408
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 14097248130
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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