Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP05_T7_P24
(807 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,322... 32 0.62
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 30 1.9
02_05_0733 + 31309835-31310434,31314138-31314254,31314364-313148... 30 1.9
02_05_0640 - 30558523-30559027,30559123-30559252,30559388-305598... 30 1.9
09_04_0737 - 19822822-19822973,19823069-19823135,19823666-198238... 30 2.5
12_01_0302 - 2286171-2286341,2286747-2286968 29 4.4
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 29 4.4
05_03_0458 + 14280953-14281866,14281964-14282912 28 7.6
>08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,
3220080-3223195,3223303-3223561,3223665-3223951,
3224029-3224364,3224463-3224604,3224690-3224910,
3224990-3225151,3225242-3225400,3225488-3225787,
3226306-3226569,3227370-3227453
Length = 1855
Score = 31.9 bits (69), Expect = 0.62
Identities = 36/122 (29%), Positives = 52/122 (42%), Gaps = 8/122 (6%)
Frame = -3
Query: 727 PYASTTLPCDXRXHQPXSSNPRFHTPTTPDL--TSISINPRTPY*KEFAPGLKPPLSSEA 554
P S T P S ++PT+P TS S +P +P +P P S +
Sbjct: 1653 PAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1712
Query: 553 P-SAYLTPSSLGMXKGVSPPYFQVNDE**ITS--FAPY*SSF---HAYSAPLLQLTPSSK 392
P S +P+S G SP Y + TS + P + + HAYS +L+P S+
Sbjct: 1713 PTSPAYSPTSPGYSP-TSPSYSPTSPNYSPTSPSYNPSSAKYSPSHAYSPSSPRLSPYSQ 1771
Query: 391 TS 386
TS
Sbjct: 1772 TS 1773
Score = 28.7 bits (61), Expect = 5.8
Identities = 31/113 (27%), Positives = 46/113 (40%), Gaps = 2/113 (1%)
Frame = -3
Query: 727 PYASTTLPCDXRXHQPXSSNPRFHTPTTPDL--TSISINPRTPY*KEFAPGLKPPLSSEA 554
P S T P S ++PT+P TS S +P +P +P P + +
Sbjct: 1695 PSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPNYSPTSPSYNPSSAKYS 1754
Query: 553 PSAYLTPSSLGMXKGVSPPYFQVNDE**ITSFAPY*SSFHAYSAPLLQLTPSS 395
PS +PSS + PY Q + TS Y + +YS P +P+S
Sbjct: 1755 PSHAYSPSSPRL-----SPYSQTSPNYSPTS-PTYSPTSPSYSQPSPSYSPTS 1801
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 30.3 bits (65), Expect = 1.9
Identities = 28/101 (27%), Positives = 35/101 (34%), Gaps = 2/101 (1%)
Frame = -3
Query: 787 HSEESMXCHPLSFXIIXGSRPYASTTLPCDXRXHQ--PXSSNPRFHTPTTPDLTSISINP 614
HS +S PL + P P R H P P TP P SIS P
Sbjct: 52 HSPDSPPPPPLPTPTVTTPTPPPPPPAPRPPRRHHRIPPPPPPLLPTPPPPP-ASISPTP 110
Query: 613 RTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVSPPYF 491
P AP P + + PS+ PS + P+F
Sbjct: 111 APPLPPPPAPAPPPTPTPKFPSSSANPSPPDAYPFTNYPFF 151
>02_05_0733 +
31309835-31310434,31314138-31314254,31314364-31314806,
31316831-31317137
Length = 488
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -1
Query: 723 MHQPPSPAIXGYINPDHQIPDSIHQPPQT*HPFPSIPG 610
+HQ PS Y NP +SIHQ P + P++PG
Sbjct: 436 LHQGPSYVTAAYENPGPAYSESIHQMPVS-STRPNVPG 472
>02_05_0640 - 30558523-30559027,30559123-30559252,30559388-30559868,
30560292-30560346,30560537-30560613,30561228-30561315,
30561490-30561593,30562050-30562231,30562347-30563109,
30563195-30563438,30564513-30564658,30565158-30565283,
30565404-30565517,30565595-30565762,30566283-30566528,
30566605-30566767,30566970-30567064,30567274-30567357,
30567769-30568055,30568359-30568572,30568923-30569140,
30569386-30569623,30570312-30571118,30571202-30571301,
30571694-30571737,30571824-30571973
Length = 1942
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/65 (32%), Positives = 31/65 (47%)
Frame = -2
Query: 239 PPFDTVLYDNIRTVLKDNKTALLSASIQASLPSSEIYRQLVDPRHASSDSFGVYVKS*SL 60
P F T+LY ++KD S+ L S+ Y L+DP AS D+ + +
Sbjct: 1349 PEFHTLLYAEAARIIKDCWWLADSSRPVKELDSAVGYA-LLDPTWASQDNTSTAIGNIVA 1407
Query: 59 ILHSF 45
+LHSF
Sbjct: 1408 LLHSF 1412
>09_04_0737 -
19822822-19822973,19823069-19823135,19823666-19823822,
19824003-19824177,19824364-19824481,19824676-19824874,
19824983-19825062,19825141-19825257,19825791-19825961,
19826121-19826597
Length = 570
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = +3
Query: 72 FYVDSKGVGRSMARIYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVVV 218
F+VD G G S ++++LAV+ G R CR VV DVVV
Sbjct: 93 FHVDPTGDGSSFLQLHRLAVE-GTRRLLAACCRSGVRTVVYTGSADVVV 140
>12_01_0302 - 2286171-2286341,2286747-2286968
Length = 130
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 80 RLQRSRKKHGEDLPTGGRSRRKGEKLE*MQREEQ 181
RL+R RK + D+ G + +GEKLE + +E+
Sbjct: 57 RLERLRKGYARDVRAAGAMKVRGEKLENWREKEK 90
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 29.1 bits (62), Expect = 4.4
Identities = 22/80 (27%), Positives = 29/80 (36%), Gaps = 2/80 (2%)
Frame = -3
Query: 727 PYASTTLPCDXRXHQPXSSNPRFHTPTTPDL--TSISINPRTPY*KEFAPGLKPPLSSEA 554
P S T P S ++PT+P TS +P +P +P P
Sbjct: 1757 PSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYT 1816
Query: 553 PSAYLTPSSLGMXKGVSPPY 494
PS +PSS SP Y
Sbjct: 1817 PSHAYSPSSPNYYSSTSPTY 1836
>05_03_0458 + 14280953-14281866,14281964-14282912
Length = 620
Score = 28.3 bits (60), Expect = 7.6
Identities = 23/81 (28%), Positives = 31/81 (38%), Gaps = 2/81 (2%)
Frame = -3
Query: 733 SRPYASTTLP--CDXRXHQPXSSNPRFHTPTTPDLTSISINPRTPY*KEFAPGLKPPLSS 560
S Y T+ P C P SSN + TTP + +P +P PPL
Sbjct: 14 SSSYGPTSPPSSCRNAAPSPPSSNSTPTSSTTPTVPPSLTTTSSPSSSPSSPPPLPPLQP 73
Query: 559 EAPSAYLTPSSLGMXKGVSPP 497
P L P++L +PP
Sbjct: 74 TPPP--LPPTTLSCSSHPTPP 92
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,515,307
Number of Sequences: 37544
Number of extensions: 462512
Number of successful extensions: 1201
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1195
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2197677108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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