Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP05_T7_P24
         (807 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46791-5|CAA86755.2|  948|Caenorhabditis elegans Hypothetical pr...    30   1.7  
Z81586-13|CAN86915.1|  563|Caenorhabditis elegans Hypothetical p...    28   6.8  
Z81586-12|CAB04692.1|  557|Caenorhabditis elegans Hypothetical p...    28   6.8  
AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical...    28   9.0  
AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical...    28   9.0  

>Z46791-5|CAA86755.2|  948|Caenorhabditis elegans Hypothetical
           protein C09G5.6 protein.
          Length = 948

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 13/43 (30%), Positives = 16/43 (37%)
 Frame = -3

Query: 730 RPYASTTLPCDXRXHQPXSSNPRFHTPTTPDLTSISINPRTPY 602
           RPY     P     H   ++    + P  P  T    NPR PY
Sbjct: 172 RPYPPQQPPSTSAPHSSPNNRTSLYNPQPPPKTGYPTNPRVPY 214


>Z81586-13|CAN86915.1|  563|Caenorhabditis elegans Hypothetical
           protein T05F1.1b protein.
          Length = 563

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +1

Query: 667 DLMIXVDVXXNRRGGWLMHKGETP 738
           DL I ++    + GG+ MH G+TP
Sbjct: 308 DLAICIEAIGRKTGGFFMHAGKTP 331


>Z81586-12|CAB04692.1|  557|Caenorhabditis elegans Hypothetical
           protein T05F1.1a protein.
          Length = 557

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +1

Query: 667 DLMIXVDVXXNRRGGWLMHKGETP 738
           DL I ++    + GG+ MH G+TP
Sbjct: 305 DLAICIEAIGRKTGGFFMHAGKTP 328


>AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical
            protein Y57A10A.18b protein.
          Length = 1459

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -3

Query: 571  PLSSEAPSAYLTPSSLGMXKGVSPP 497
            P+++EAP+A   PS   + +G SPP
Sbjct: 1203 PVAAEAPAAAAAPSRARVPRGPSPP 1227


>AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical
            protein Y57A10A.18a protein.
          Length = 1456

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -3

Query: 571  PLSSEAPSAYLTPSSLGMXKGVSPP 497
            P+++EAP+A   PS   + +G SPP
Sbjct: 1203 PVAAEAPAAAAAPSRARVPRGPSPP 1227


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,161,206
Number of Sequences: 27780
Number of extensions: 348631
Number of successful extensions: 986
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 942
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 984
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)