SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP05_T7_P22
         (773 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC040074-1|AAH40074.1|  570|Homo sapiens FAM20C protein protein.       32   2.0  
AF533706-1|AAQ09019.1|  584|Homo sapiens unknown protein protein.      32   2.0  
BC000178-1|AAH00178.1|  381|Homo sapiens potassium channel modul...    31   4.6  
AL122115-1|CAB59274.1|  280|Homo sapiens hypothetical protein pr...    31   4.6  
AK023403-1|BAB14563.1|  381|Homo sapiens protein ( Homo sapiens ...    31   4.6  
AF155652-1|AAF67009.1|  381|Homo sapiens potassium channel modul...    31   4.6  
AC022210-2|AAY24192.1|  200|Homo sapiens unknown protein.              31   4.6  
AB083199-1|BAC43745.1|  381|Homo sapiens FIGC1 protein.                31   4.6  
BC127099-1|AAI27100.1|  649|Homo sapiens KIAA1683 protein protein.     30   8.0  
BC112932-1|AAI12933.1| 1367|Homo sapiens KIAA1683 protein protein.     30   8.0  
AB126076-1|BAD20203.1|  165|Homo sapiens keratin associated prot...    25   8.6  

>BC040074-1|AAH40074.1|  570|Homo sapiens FAM20C protein protein.
          Length = 570

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
 Frame = -1

Query: 269 RLDGXGGRPTGPPNDEITPPARTADIGAPA-LRLHLR*GAPPRRRLCCGRS---NQRRQR 102
           RL+  G RP+G P      PA  A++ AP   ++  R G PP      G +   N+   R
Sbjct: 18  RLERRGARPSGEPGCSCAQPA--AEVAAPGWAQVRGRPGEPPAASSAAGDAGWPNKHTLR 75

Query: 101 VFQSFS 84
           + Q FS
Sbjct: 76  ILQDFS 81


>AF533706-1|AAQ09019.1|  584|Homo sapiens unknown protein protein.
          Length = 584

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
 Frame = -1

Query: 269 RLDGXGGRPTGPPNDEITPPARTADIGAPA-LRLHLR*GAPPRRRLCCGRS---NQRRQR 102
           RL+  G RP+G P      PA  A++ AP   ++  R G PP      G +   N+   R
Sbjct: 32  RLERRGARPSGEPGCSCAQPA--AEVAAPGWAQVRGRPGEPPAASSAAGDAGWPNKHTLR 89

Query: 101 VFQSFS 84
           + Q FS
Sbjct: 90  ILQDFS 95


>BC000178-1|AAH00178.1|  381|Homo sapiens potassium channel
           modulatory factor 1 protein.
          Length = 381

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 16/38 (42%), Positives = 24/38 (63%)
 Frame = +2

Query: 209 LEA*SRRLADPSAGLRYRRGDLPGSRGLGGPQPRKSHL 322
           LE  + R  D S+G+R+ R      RGLGGP+ R+S++
Sbjct: 134 LEHRAPRDLDESSGVRHVRRMFHPGRGLGGPRARRSNM 171


>AL122115-1|CAB59274.1|  280|Homo sapiens hypothetical protein
           protein.
          Length = 280

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 16/38 (42%), Positives = 24/38 (63%)
 Frame = +2

Query: 209 LEA*SRRLADPSAGLRYRRGDLPGSRGLGGPQPRKSHL 322
           LE  + R  D S+G+R+ R      RGLGGP+ R+S++
Sbjct: 33  LEHRAPRDLDESSGVRHVRRMFHPGRGLGGPRARRSNM 70


>AK023403-1|BAB14563.1|  381|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13341 fis, clone OVARC1001943, highly similar to
           Mus musculus DEBT-91 mRNA. ).
          Length = 381

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 16/38 (42%), Positives = 24/38 (63%)
 Frame = +2

Query: 209 LEA*SRRLADPSAGLRYRRGDLPGSRGLGGPQPRKSHL 322
           LE  + R  D S+G+R+ R      RGLGGP+ R+S++
Sbjct: 134 LEHRAPRDLDESSGVRHVRRMFHPGRGLGGPRARRSNM 171


>AF155652-1|AAF67009.1|  381|Homo sapiens potassium channel
           modulatory factor protein.
          Length = 381

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 16/38 (42%), Positives = 24/38 (63%)
 Frame = +2

Query: 209 LEA*SRRLADPSAGLRYRRGDLPGSRGLGGPQPRKSHL 322
           LE  + R  D S+G+R+ R      RGLGGP+ R+S++
Sbjct: 134 LEHRAPRDLDESSGVRHVRRMFHPGRGLGGPRARRSNM 171


>AC022210-2|AAY24192.1|  200|Homo sapiens unknown protein.
          Length = 200

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 16/38 (42%), Positives = 24/38 (63%)
 Frame = +2

Query: 209 LEA*SRRLADPSAGLRYRRGDLPGSRGLGGPQPRKSHL 322
           LE  + R  D S+G+R+ R      RGLGGP+ R+S++
Sbjct: 134 LEHRAPRDLDESSGVRHVRRMFHPGRGLGGPRARRSNM 171


>AB083199-1|BAC43745.1|  381|Homo sapiens FIGC1 protein.
          Length = 381

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 16/38 (42%), Positives = 24/38 (63%)
 Frame = +2

Query: 209 LEA*SRRLADPSAGLRYRRGDLPGSRGLGGPQPRKSHL 322
           LE  + R  D S+G+R+ R      RGLGGP+ R+S++
Sbjct: 134 LEHRAPRDLDESSGVRHVRRMFHPGRGLGGPRARRSNM 171


>BC127099-1|AAI27100.1|  649|Homo sapiens KIAA1683 protein protein.
          Length = 649

 Score = 30.3 bits (65), Expect = 8.0
 Identities = 17/68 (25%), Positives = 32/68 (47%)
 Frame = +2

Query: 416 RVPPLLHDVTPTLRNPTANTCQARTSTHFTGKTCIRLRNPNTAASPDTNAPDVLSYRSRR 595
           + PP +H VT   +NP      A  S   + ++ + +  P    SP T  P +++    +
Sbjct: 452 KTPPQMHPVTTPAKNPLQTCLSATMSKTSSQRSPVGVTKP----SPQTRLPAMITKTPAQ 507

Query: 596 LQNVSIFL 619
           L++V+  L
Sbjct: 508 LRSVATIL 515


>BC112932-1|AAI12933.1| 1367|Homo sapiens KIAA1683 protein protein.
          Length = 1367

 Score = 30.3 bits (65), Expect = 8.0
 Identities = 17/68 (25%), Positives = 32/68 (47%)
 Frame = +2

Query: 416 RVPPLLHDVTPTLRNPTANTCQARTSTHFTGKTCIRLRNPNTAASPDTNAPDVLSYRSRR 595
           + PP +H VT   +NP      A  S   + ++ + +  P    SP T  P +++    +
Sbjct: 452 KTPPQMHPVTTPAKNPLQTCLSATMSKTSSQRSPVGVTKP----SPQTRLPAMITKTPAQ 507

Query: 596 LQNVSIFL 619
           L++V+  L
Sbjct: 508 LRSVATIL 515


>AB126076-1|BAD20203.1|  165|Homo sapiens keratin associated protein
           protein.
          Length = 165

 Score = 24.6 bits (51), Expect(2) = 8.6
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -1

Query: 569 PVRSCLAMRRCSGSAGGC 516
           P  SC +   C GS GGC
Sbjct: 50  PACSCSSCGSCGGSKGGC 67



 Score = 24.2 bits (50), Expect(2) = 8.6
 Identities = 11/27 (40%), Positives = 11/27 (40%)
 Frame = -1

Query: 539 CSGSAGGCRFFR*SACLCVLDKCSRLG 459
           C GS GGC     S C C    C   G
Sbjct: 80  CGGSKGGCGSCGCSQCSCYKPCCCSSG 106


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,204,406
Number of Sequences: 237096
Number of extensions: 2757184
Number of successful extensions: 8849
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 8092
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8841
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9367263024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -