Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP05_T7_P19
(789 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_06_0281 + 26912419-26913099 33 0.20
02_02_0063 + 6481568-6481570,6481922-6482470 33 0.34
11_07_0002 - 27171791-27172222 32 0.60
09_02_0279 + 6702517-6702948 32 0.60
07_03_1389 + 26212117-26212119,26212721-26212875,26213402-262134... 29 3.2
07_03_0315 - 16674660-16674712,16674966-16675158 29 3.2
04_04_1019 + 30166514-30166585,30167207-30167841,30168505-301686... 29 3.2
04_03_0849 + 20265511-20265984,20266452-20266617,20266694-202669... 29 3.2
09_01_0043 + 790859-790873,791410-791603,792521-792605,792719-79... 29 4.2
07_03_0111 + 13535912-13535972,13536081-13536142,13536418-135365... 29 4.2
01_06_0752 + 31704071-31704787 29 4.2
11_08_0092 - 28307180-28307380,28307471-28307936,28308008-283081... 29 5.6
05_02_0027 + 5731546-5731820,5731917-5733039,5733124-5733354 28 7.4
11_06_0610 - 25449085-25453284 28 9.7
09_01_0112 + 1737438-1737777,1738441-1738511,1738974-1739052,174... 28 9.7
08_02_1035 - 23840606-23841109,23841194-23841199 28 9.7
05_06_0282 + 26915249-26915881 28 9.7
05_01_0184 - 1298640-1298751,1298936-1299027,1299695-1299910,130... 28 9.7
05_01_0182 + 1284900-1285469,1285604-1286612,1286698-1287107 28 9.7
03_06_0199 + 32310272-32311432 28 9.7
03_03_0164 - 14979364-14979479,14979613-14980102 28 9.7
>05_06_0281 + 26912419-26913099
Length = 226
Score = 33.5 bits (73), Expect = 0.20
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +2
Query: 239 QPDGAAHPKDAQPTEPSRRIEGSETSAVSVRQPVGPPRRCRWCPGIPRWTRTSLPGRD 412
+P G P + P P+ ++ +R+P GP W PG+P T+T L G D
Sbjct: 82 RPVGPTPPPPSHPVVPTPTQLAADDDGGLLRRPGGPTPPSPWHPGVP--TQTQLAGGD 137
>02_02_0063 + 6481568-6481570,6481922-6482470
Length = 183
Score = 32.7 bits (71), Expect = 0.34
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = -1
Query: 435 ATGRRCIASRPGRLVLVQRGIPGHQRHRLGGPTG 334
ATGRR A+RPGRLV + + G +R GP G
Sbjct: 130 ATGRRDAATRPGRLVAMAATV-GSRREERRGPAG 162
>11_07_0002 - 27171791-27172222
Length = 143
Score = 31.9 bits (69), Expect = 0.60
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = -3
Query: 430 RSTVYRVPTRQAGSGPAGYSGTPAAPSGRPDG----LPYRDGRRF 308
RS+ + +AGS PAG G+PA G P G P GR F
Sbjct: 55 RSSAASTSSARAGSTPAGVRGSPAGAGGSPGGGSGSTPVGGGRSF 99
>09_02_0279 + 6702517-6702948
Length = 143
Score = 31.9 bits (69), Expect = 0.60
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = -3
Query: 430 RSTVYRVPTRQAGSGPAGYSGTPAAPSGRPDG----LPYRDGRRF 308
RS+ + +AGS PAG G+PA G P G P GR F
Sbjct: 55 RSSAASTSSARAGSTPAGVRGSPAGAGGSPGGGSGSTPVGGGRSF 99
>07_03_1389 +
26212117-26212119,26212721-26212875,26213402-26213479,
26214211-26214375,26214453-26214554,26214661-26214786,
26215454-26215490
Length = 221
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 177 RPIPSEVRTRMR*GGYRGQHYNQTVRLTPR 266
R PSE+R+R R G RG+ Y+Q +PR
Sbjct: 121 RKKPSEMRSRDRISGSRGRSYDQRYSRSPR 150
>07_03_0315 - 16674660-16674712,16674966-16675158
Length = 81
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = -1
Query: 432 TGRRCIASRPGRLVLVQRGIPGHQRHRLGGPTGCRTETADVSEPSIRLEGSVG 274
TG + + S GR +L I +R R+G P GC+ + S I L VG
Sbjct: 11 TGEKGVRSGVGRDILRDEKIK--ERKRMGQPAGCQADLLICSPVKINLFSQVG 61
>04_04_1019 +
30166514-30166585,30167207-30167841,30168505-30168645,
30169604-30170300
Length = 514
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 540 QGPGRTGVFPPPAPGSTATDRCGKGXA 620
Q P +FPPP S+ TD CG G A
Sbjct: 62 QLPAEPMLFPPPPSLSSTTDGCGAGGA 88
>04_03_0849 +
20265511-20265984,20266452-20266617,20266694-20266905,
20267154-20267647,20267732-20267780,20267922-20268251
Length = 574
Score = 29.5 bits (63), Expect = 3.2
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +2
Query: 320 VSVRQPVGPPRRCRWCPGIPRWTR 391
+ + + V PP R WCP RW R
Sbjct: 1 MEIARVVAPPLRLAWCPASRRWGR 24
>09_01_0043 +
790859-790873,791410-791603,792521-792605,792719-793075
Length = 216
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -3
Query: 400 QAGSGPAGYSGTPAAPSGRPDGLPYRDG 317
++GSG AG G+ A GR DG RDG
Sbjct: 118 RSGSGKAGCVGSRADQDGRLDGREVRDG 145
>07_03_0111 +
13535912-13535972,13536081-13536142,13536418-13536510,
13537577-13537649,13537876-13538265,13538337-13538404,
13539334-13539375,13540211-13540735,13540817-13540974,
13541078-13541636,13542438-13542500,13542579-13542680,
13542779-13543096,13543175-13543267,13543489-13543590,
13543678-13543782,13544190-13544323,13545097-13545280,
13545701-13545832,13546215-13546327,13546468-13546558,
13547138-13549339
Length = 1889
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +1
Query: 157 PXTLTPDVRSPPRSEPG*GRGATAVNTTTRRCGSPQGRPADGAFEA 294
P D + P EP + +A T RR GSP PA A +A
Sbjct: 129 PPPSPKDAAADPAKEPSGSKAGSAAATGGRRTGSPPPSPAPVAKDA 174
>01_06_0752 + 31704071-31704787
Length = 238
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = +3
Query: 552 RTGVFPPPAPGSTATDRC 605
R GV PPP P STA RC
Sbjct: 159 RAGVEPPPPPPSTAAARC 176
>11_08_0092 -
28307180-28307380,28307471-28307936,28308008-28308117,
28308206-28308493,28309024-28309059
Length = 366
Score = 28.7 bits (61), Expect = 5.6
Identities = 25/85 (29%), Positives = 32/85 (37%), Gaps = 1/85 (1%)
Frame = +2
Query: 182 DPLRGQNPDEVGGLPRSTLQPDGAAHPKDAQPTEPSRRIEGSETSAVSVRQPVGPPRRCR 361
D + G+ PD QP A P+D QP PS + TS R+ G
Sbjct: 188 DAVHGEQPDGERDADEHRGQPHQRAAPRDVQPPSPSS--SPATTSPAHPRRAHGQVLLGS 245
Query: 362 WCPGIPRW-TRTSLPGRDAIHRRPV 433
P P W + LP R R P+
Sbjct: 246 H-PRGPHWRVQGHLPQRQGPRRVPI 269
>05_02_0027 + 5731546-5731820,5731917-5733039,5733124-5733354
Length = 542
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 216 GGYRGQHYNQTVRLTPRTPSRRSLRG 293
GGYRG + TV LTPR+ + RG
Sbjct: 173 GGYRGFYARNTVELTPRSVNGIHKRG 198
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 27.9 bits (59), Expect = 9.7
Identities = 21/78 (26%), Positives = 31/78 (39%), Gaps = 1/78 (1%)
Frame = +2
Query: 185 PLRGQNPDEVGGLPRSTLQ-PDGAAHPKDAQPTEPSRRIEGSETSAVSVRQPVGPPRRCR 361
P + P+E P S + P AHP P+E S E+S + + PP
Sbjct: 770 PPKSSPPEEKSPPPHSPEKSPPSEAHPTSPPPSEKSPPTPAEESSPPTPEKSPSPPSGHE 829
Query: 362 WCPGIPRWTRTSLPGRDA 415
P P ++S P +A
Sbjct: 830 GTPPSP--VKSSSPPPEA 845
>09_01_0112 +
1737438-1737777,1738441-1738511,1738974-1739052,
1741559-1741641,1741733-1741784,1742038-1742105,
1742279-1742345,1742426-1742505,1742576-1742640,
1742785-1742847,1743271-1743427,1743511-1743588,
1743677-1744219,1744321-1744497,1744534-1744788,
1745270-1745329,1745874-1745888,1746123-1746135,
1746819-1746934
Length = 793
Score = 27.9 bits (59), Expect = 9.7
Identities = 17/44 (38%), Positives = 20/44 (45%)
Frame = +3
Query: 483 RPHPLRSPLDLHRGGGRHLQGPGRTGVFPPPAPGSTATDRCGKG 614
R HP R P D H GGG + G G G + P G G+G
Sbjct: 70 RFHPYRGPSD-HSGGGGYRSGGG--GEYGEPGSGPRHRYGSGRG 110
>08_02_1035 - 23840606-23841109,23841194-23841199
Length = 169
Score = 27.9 bits (59), Expect = 9.7
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2
Query: 206 PGSDLGGDRTSGVRVXGESFSGWVLKSLG 120
PG+ GG+RT G V E++ V +LG
Sbjct: 35 PGAGAGGERTGGSAVGAEAWGDGVAAALG 63
>05_06_0282 + 26915249-26915881
Length = 210
Score = 27.9 bits (59), Expect = 9.7
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +3
Query: 483 RPHPLRSPLDLHRGGGRHLQGPGRTGVFPPPAPG 584
RPH +PL GGG + PGR PPP PG
Sbjct: 65 RPHGRVTPLADGGGGGVLRRPPGRGP--PPPGPG 96
>05_01_0184 -
1298640-1298751,1298936-1299027,1299695-1299910,
1300045-1300614
Length = 329
Score = 27.9 bits (59), Expect = 9.7
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 522 GGGRHLQGPGRTGVFPPPAPGS 587
G HLQ P R + P PAPG+
Sbjct: 102 GAATHLQQPSRMKLSPSPAPGA 123
>05_01_0182 + 1284900-1285469,1285604-1286612,1286698-1287107
Length = 662
Score = 27.9 bits (59), Expect = 9.7
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 522 GGGRHLQGPGRTGVFPPPAPGS 587
G HLQ P R + P PAPG+
Sbjct: 102 GAATHLQQPSRMKLSPSPAPGA 123
>03_06_0199 + 32310272-32311432
Length = 386
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -2
Query: 83 SHIPRAPLLRGDLVGGSALYPKKKKK 6
S PR PLLRG + GGSA + + +K
Sbjct: 203 SREPRVPLLRGGIRGGSAAHLQDGQK 228
>03_03_0164 - 14979364-14979479,14979613-14980102
Length = 201
Score = 27.9 bits (59), Expect = 9.7
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +2
Query: 191 RGQNPDEVGGLPRSTLQPDGAAHPKDAQPTEPSRRIE-GSETSAVSVRQPVGPPRRCR 361
RG+ G +T+ DG+ H + P P R + G E V+ P G RR R
Sbjct: 83 RGRRRQRRGPGTATTMLEDGSIHTQRGSPPLPPRSGQRGGEEGEVAAAAPGGGGRRWR 140
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,863,150
Number of Sequences: 37544
Number of extensions: 479919
Number of successful extensions: 1882
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1879
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2127163404
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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