Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP05_T7_P13
(798 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0058 + 17548945-17548947,17549234-17549281,17549618-175496... 163 1e-40
01_03_0277 + 14496298-14496300,14496875-14496952,14497061-144972... 157 1e-38
02_01_0047 - 316960-317397,317647-317744,317837-318017,318122-31... 156 2e-38
04_04_0040 + 22322839-22324173 33 0.26
08_02_0509 - 17988458-17988892,17988986-17989147,17989542-17990378 31 1.1
05_02_0043 + 5964749-5966406,5966725-5966791,5967174-5967329,596... 30 1.9
07_03_1757 + 29250163-29250349,29250612-29250813,29250898-292510... 30 2.5
12_02_0735 - 22636835-22639502,22639755-22640734 29 3.2
12_02_0759 - 22882435-22882731 29 4.3
06_01_0083 - 659510-661267,661577-662384,662700-663646 29 4.3
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 29 5.7
04_01_0492 + 6476586-6476873,6477414-6477686,6477769-6477948,647... 28 7.5
02_01_0285 - 1913425-1914065,1914094-1914177,1914249-1915140,191... 28 7.5
07_01_0172 - 1201595-1201912,1202637-1202723,1202836-1202895,120... 28 9.9
06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,805... 28 9.9
04_04_1303 - 32487174-32487871,32488583-32489123 28 9.9
01_01_0703 - 5425713-5425862,5426302-5426451,5426853-5426964,542... 28 9.9
>05_04_0058 +
17548945-17548947,17549234-17549281,17549618-17549695,
17549952-17550132,17550223-17550320,17550827-17551258
Length = 279
Score = 163 bits (396), Expect = 1e-40
Identities = 86/170 (50%), Positives = 104/170 (61%), Gaps = 1/170 (0%)
Frame = -1
Query: 765 GGMHPXTVNRSPQVAXVLAPGIF-LRXRLKYALTGNEVLKXCEQRLIKVDGKXXXXXXXX 589
GG + P A P I LR RLKYALT EV+ QR + VDGK
Sbjct: 40 GGAFAPKPSSGPHKARECLPLILILRNRLKYALTYREVISILMQRHVMVDGKVRTDKTYP 99
Query: 588 XXLWDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHD 409
DVVSI KT E FRL+YD KGRF +H I E+AK+KLCKV+ V G K +P+L T+D
Sbjct: 100 AGFMDVVSIAKTGENFRLLYDTKGRFRLHSIKDEDAKFKLCKVRSVQFGQKGIPFLNTND 159
Query: 408 GRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFEFGELVYDHGRP*LGACG 259
GRTIRYPDPLIK ND+I++D+ T KI+DFIKF+ G +V G G G
Sbjct: 160 GRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNIVMVTGGRNTGRVG 209
Score = 112 bits (269), Expect = 4e-25
Identities = 49/80 (61%), Positives = 63/80 (78%)
Frame = -2
Query: 305 GNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYIS 126
GN+ M+TGGRN GRVG I SRE+H GSF+ +H++D+ GH FATR+ NVF IGK K ++S
Sbjct: 194 GNIVMVTGGRNTGRVGVIKSREKHKGSFETIHVEDALGHQFATRMGNVFTIGKERKPWVS 253
Query: 125 LPRGKGIRLTIAEERDKRIA 66
LP+GKGI+L+I EE KR A
Sbjct: 254 LPKGKGIKLSIIEEARKRNA 273
>01_03_0277 +
14496298-14496300,14496875-14496952,14497061-14497241,
14497348-14497445,14497542-14497979
Length = 265
Score = 157 bits (381), Expect = 1e-38
Identities = 76/148 (51%), Positives = 97/148 (65%)
Frame = -1
Query: 702 IFLRXRLKYALTGNEVLKXCEQRLIKVDGKXXXXXXXXXXLWDVVSIEKTNELFRLIYDV 523
+ +R RLKYALT EV+ QR + VDGK DV+SI KT E +RL+YD
Sbjct: 46 LIIRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDT 105
Query: 522 KGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIA 343
KGRF + + E+AK+KLCKV+ V G K +PYL T+DGRTIRYPDPLIK ND+I++D+
Sbjct: 106 KGRFRLQSVKDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLE 165
Query: 342 TTKIMDFIKFEFGELVYDHGRP*LGACG 259
T KI+DFIKF+ G +V G G G
Sbjct: 166 TNKIVDFIKFDVGNVVMVTGGRNTGRVG 193
Score = 118 bits (283), Expect = 7e-27
Identities = 51/81 (62%), Positives = 66/81 (81%)
Frame = -2
Query: 305 GNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYIS 126
GN+ M+TGGRN GRVG I +RE+H GSF+ +H++D+ GH FATRL NVF IGKG K ++S
Sbjct: 178 GNVVMVTGGRNTGRVGVIKNREKHKGSFETIHVEDALGHAFATRLGNVFTIGKGNKPWVS 237
Query: 125 LPRGKGIRLTIAEERDKRIAA 63
LP+GKGI+L+I EE+ KR AA
Sbjct: 238 LPKGKGIKLSIIEEQRKRDAA 258
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -2
Query: 794 PKHXXGXTWXVVCTRXPSTGPXKXRECLPL 705
PKH PS+GP K RECLPL
Sbjct: 15 PKHWMLDKLGGAFAPKPSSGPHKSRECLPL 44
>02_01_0047 -
316960-317397,317647-317744,317837-318017,318122-318199,
319023-319025
Length = 265
Score = 156 bits (379), Expect = 2e-38
Identities = 75/148 (50%), Positives = 97/148 (65%)
Frame = -1
Query: 702 IFLRXRLKYALTGNEVLKXCEQRLIKVDGKXXXXXXXXXXLWDVVSIEKTNELFRLIYDV 523
+ +R RLKYALT EV+ QR + VDGK DV+SI KT E +RL+YD
Sbjct: 46 LIIRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDT 105
Query: 522 KGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIA 343
KGRF + + E+AK+KLCKV+ V G K +PYL T+DGRTIRYPDP+IK ND+I++D+
Sbjct: 106 KGRFRLQSVKDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPIIKANDTIKIDLE 165
Query: 342 TTKIMDFIKFEFGELVYDHGRP*LGACG 259
T KI+DFIKF+ G +V G G G
Sbjct: 166 TNKIVDFIKFDVGNVVMVTGGRNTGRVG 193
Score = 117 bits (282), Expect = 9e-27
Identities = 51/81 (62%), Positives = 66/81 (81%)
Frame = -2
Query: 305 GNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYIS 126
GN+ M+TGGRN GRVG I +RE+H GSF+ +H++D+ GH FATRL NVF IGKG K ++S
Sbjct: 178 GNVVMVTGGRNTGRVGVIKNREKHKGSFETIHVEDALGHQFATRLGNVFTIGKGNKPWVS 237
Query: 125 LPRGKGIRLTIAEERDKRIAA 63
LP+GKGI+L+I EE+ KR AA
Sbjct: 238 LPKGKGIKLSIIEEQRKRDAA 258
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -2
Query: 794 PKHXXGXTWXVVCTRXPSTGPXKXRECLPL 705
PKH PS+GP K RECLPL
Sbjct: 15 PKHWMLDKLGGAFAPKPSSGPHKSRECLPL 44
>04_04_0040 + 22322839-22324173
Length = 444
Score = 33.1 bits (72), Expect = 0.26
Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = -1
Query: 237 TSRL--LR-HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAG 79
TSRL LR H H HG + RH++ +R R H L A G P + AG
Sbjct: 25 TSRLKGLRVHLTHVDAHGNYSRHQLLRRAARRSHHRMSRLVARATGVPMTSSKAAG 80
>08_02_0509 - 17988458-17988892,17988986-17989147,17989542-17990378
Length = 477
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/60 (36%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Frame = -1
Query: 246 PRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQG--HPPHHRRGAGQA 73
P +RL RH G HG R + E + GH H G P HH RG GQA
Sbjct: 15 PEAHARLPRHAPPAGGHGRGGRGQ-EGPIAIAAGHGRGHRGGGHGGPASPRHHLRGRGQA 73
>05_02_0043 +
5964749-5966406,5966725-5966791,5967174-5967329,
5967782-5967865,5968020-5968073
Length = 672
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/64 (26%), Positives = 25/64 (39%)
Frame = -1
Query: 255 HRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQ 76
H R + H H G H H +H E +L +++ GH P+ R A Q
Sbjct: 313 HMYVRPSPNQDEHHGHTGHHIRHFLQLGWDYLHLTYKQEAANLGSSQNGHFPYRWRRASQ 372
Query: 75 AHRS 64
H +
Sbjct: 373 YHEA 376
>07_03_1757 +
29250163-29250349,29250612-29250813,29250898-29251008,
29251112-29251160,29251247-29251353,29251439-29251942,
29252486-29252614,29252865-29253161,29253274-29253720,
29253828-29253893,29254109-29254169,29254314-29254463,
29254555-29254689,29254791-29254818,29255430-29255479
Length = 840
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 157 MNTLFNLVAKVCPVESLMCTMSKEPGCLSRDTMVPTRPKLR 279
+N +F L V L+CT+ GC + +VP P++R
Sbjct: 213 LNAIFELFVWVNDSTVLVCTIPSSRGCPPKKPLVPFGPRIR 253
>12_02_0735 - 22636835-22639502,22639755-22640734
Length = 1215
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 145 PLPIMNTLFNLVAKVCPVESLMCTMSKEPGCL 240
PL NT+ +++A PVE L C +S + G L
Sbjct: 425 PLVTANTILSILAADYPVEKLACYLSDDGGAL 456
>12_02_0759 - 22882435-22882731
Length = 98
Score = 29.1 bits (62), Expect = 4.3
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = -1
Query: 192 THLRHEVEQRVHNRQGHEGVH-LAAARQGHPPHHRRGAGQAHRSQG 58
TH RH + +R R+G G L A R P H G G+ R +G
Sbjct: 42 THERHHLVERGQRRRGDRGAGVLGADRVEEGPQH--GGGERRRGRG 85
>06_01_0083 - 659510-661267,661577-662384,662700-663646
Length = 1170
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 145 PLPIMNTLFNLVAKVCPVESLMCTMSKEPGCL 240
PL NT+ +++A PVE L C +S + G L
Sbjct: 414 PLVTANTILSILAADYPVEKLSCYVSDDGGAL 445
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = -3
Query: 259 APSCPARDI--PAPSTLCTSRTPRDTPSP 179
AP P+ D PAP T T +P TPSP
Sbjct: 70 APDAPSGDFFPPAPPTTTTPTSPGTTPSP 98
>04_01_0492 +
6476586-6476873,6477414-6477686,6477769-6477948,
6478436-6478696,6479171-6479303,6479404-6479494,
6479921-6480023,6480557-6480660,6480809-6480902,
6480985-6481140,6481224-6481286,6481388-6481453,
6481670-6481870,6481999-6482076,6482165-6482284,
6482382-6482462,6482548-6482633,6482920-6483031,
6483093-6483170,6483306-6483482
Length = 914
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -1
Query: 123 AARQGHPPHHRRGAG 79
AAR+GHPP H G G
Sbjct: 4 AARRGHPPPHENGVG 18
>02_01_0285 -
1913425-1914065,1914094-1914177,1914249-1915140,
1915205-1915249,1915335-1915870,1915987-1916041
Length = 750
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = -1
Query: 543 FRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 439
+ LIYD++G + + P++A L ++ V T P
Sbjct: 147 YALIYDIQGSLALPILDPDDASSPLAVLELVTTAP 181
>07_01_0172 -
1201595-1201912,1202637-1202723,1202836-1202895,
1203007-1203106,1203227-1203633,1204728-1204883,
1204981-1205106,1205503-1205572,1205679-1205767
Length = 470
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +2
Query: 182 RRCVPWSP*CA--QCRRSRDVSRGTRWCPHAPSY 277
+RC+P S A +CR+SR S+ W P+ S+
Sbjct: 423 QRCLPESLRAAVQRCRQSRPASKVVEWAPYRHSF 456
>06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,
8057595-8058314,8058404-8058603,8058988-8059172,
8059287-8059354,8059432-8060246,8060502-8060599,
8060702-8060887,8061358-8061538,8061651-8061812,
8061894-8061937,8062059-8062115,8062409-8062505,
8062614-8062786,8062868-8063081,8063270-8063395,
8064072-8064188,8064459-8064566,8064729-8064898,
8065049-8065127,8065211-8065285,8065845-8065942,
8066030-8066137,8066238-8066295,8066527-8066631,
8067461-8069516,8069804-8070697,8070896-8071852,
8072022-8072075,8072157-8072222,8072294-8073472,
8073868-8075598,8075764-8075829,8076763-8077788,
8077893-8078041
Length = 4264
Score = 27.9 bits (59), Expect = 9.9
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = +1
Query: 184 KVCPVESLMCTMSKEPGCLSRDTMVPTRPKLRPPVIIHKFPE 309
K+C V+S S +PG +SRD VP KL P K PE
Sbjct: 1554 KLCQVDS---PDSPQPGGISRDADVPKVVKLEVPPESSKEPE 1592
>04_04_1303 - 32487174-32487871,32488583-32489123
Length = 412
Score = 27.9 bits (59), Expect = 9.9
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +3
Query: 174 PRGEGVSRGVLDVHNVEGAGMSLAGHDGAHTPQVTASRDHTQVPR 308
P GE ++R VL V AG++ G H P + R T+ P+
Sbjct: 170 PGGEEIARSVLRVR----AGLACRGTQAFHPPDIHRGRAATRTPK 210
>01_01_0703 -
5425713-5425862,5426302-5426451,5426853-5426964,
5427120-5427481,5427578-5427712,5427812-5427889,
5427989-5428174,5428266-5428452,5428552-5428658,
5428732-5428806,5428885-5429040,5429165-5429437,
5429548-5429643,5429724-5429814,5429883-5430385
Length = 886
Score = 27.9 bits (59), Expect = 9.9
Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 3/78 (3%)
Frame = -1
Query: 327 DFIKFEFGELVYDHGRP*LGACG-HHRVPRETSRLLRHCAHQGLHGTHLRHE--VEQRVH 157
D ++ + +LVYDHGR + A G RVP + HQ T E V H
Sbjct: 89 DRLQKQVSQLVYDHGRHGVAAAGMMRRVPAFPPQAAAAAGHQLATATDTSCESVVTSGHH 148
Query: 156 NRQGHEGVHLAAARQGHP 103
++Q V R P
Sbjct: 149 HQQQQHNVVQPPPRDASP 166
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,672,833
Number of Sequences: 37544
Number of extensions: 521217
Number of successful extensions: 1693
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1686
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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