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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP05_T7_P13
         (798 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024780-6|AAF60569.1|  259|Caenorhabditis elegans Ribosomal pro...   160   9e-40
AL132948-1|CAC51077.1|  735|Caenorhabditis elegans Hypothetical ...    39   0.004
AF125964-1|AAD14753.1|  471|Caenorhabditis elegans Hypothetical ...    33   0.18 
U97189-1|AAC48164.1|  623|Caenorhabditis elegans Hypothetical pr...    30   2.2  
Z81579-4|CAE17915.1|  212|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z66499-4|CAA91301.1|  164|Caenorhabditis elegans Hypothetical pr...    29   2.9  
U55854-7|AAK68158.1|  166|Caenorhabditis elegans Hypothetical pr...    29   2.9  
U55854-6|AAK68161.1|  197|Caenorhabditis elegans Hypothetical pr...    29   2.9  
AL110490-13|CAB54454.1|  377|Caenorhabditis elegans Hypothetical...    29   3.9  
AL110490-12|CAB54447.1|  326|Caenorhabditis elegans Hypothetical...    29   3.9  
Z74028-3|CAA98425.1| 1908|Caenorhabditis elegans Hypothetical pr...    29   5.1  
Z81573-1|CAB04625.3|  909|Caenorhabditis elegans Hypothetical pr...    28   6.7  
Z69302-8|CAA93261.3|  420|Caenorhabditis elegans Hypothetical pr...    28   6.7  
U58760-7|AAK31463.1|  188|Caenorhabditis elegans Hypothetical pr...    28   6.7  
AC084154-12|AAK29876.1| 1137|Caenorhabditis elegans Hypothetical...    28   6.7  
AC024792-1|AAK84610.1|  938|Caenorhabditis elegans Importin beta...    28   6.7  

>AC024780-6|AAF60569.1|  259|Caenorhabditis elegans Ribosomal
           protein, small subunitprotein 4 protein.
          Length = 259

 Score =  160 bits (389), Expect = 9e-40
 Identities = 84/170 (49%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
 Frame = -1

Query: 765 GGMHPXTVNRSPQVAXVLAP-GIFLRXRLKYALTGNEVLKXCEQRLIKVDGKXXXXXXXX 589
           GG+     N  P       P  +FLR RLKYAL   E  K   QR+++VDGK        
Sbjct: 23  GGVFAVRPNPGPHKLRESLPLSLFLRNRLKYALNYTEAKKILTQRVVRVDGKVRTCHKFP 82

Query: 588 XXLWDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHD 409
               DVV+IE+TNE FR++YD KGR+ +HRI   EA +KLCKVK V T  K VP L T D
Sbjct: 83  TGFMDVVAIERTNEYFRMLYDTKGRYVVHRIQAAEADFKLCKVKSVRTVNKGVPVLTTTD 142

Query: 408 GRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFEFGELVYDHGRP*LGACG 259
           GRTIRYPDP +KVND+I  +I+T KI D +KFE G L Y  G   +G  G
Sbjct: 143 GRTIRYPDPHVKVNDTIVFNISTQKITDSVKFEPGNLAYVTGGRNVGRVG 192



 Score =  127 bits (307), Expect = 8e-30
 Identities = 58/82 (70%), Positives = 69/82 (84%)
 Frame = -2

Query: 305 GNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYIS 126
           GNL  +TGGRN+GRVG I  RER PG+ DI+HIKDS GH+FATR++NVF+IGKG KA +S
Sbjct: 177 GNLAYVTGGRNVGRVGIIGHRERLPGASDIIHIKDSAGHSFATRISNVFVIGKGNKALVS 236

Query: 125 LPRGKGIRLTIAEERDKRIAAK 60
           LP G GIRL+IAEERDKR+A K
Sbjct: 237 LPTGAGIRLSIAEERDKRMAQK 258


>AL132948-1|CAC51077.1|  735|Caenorhabditis elegans Hypothetical
           protein Y39B6A.1 protein.
          Length = 735

 Score = 39.1 bits (87), Expect = 0.004
 Identities = 22/65 (33%), Positives = 26/65 (40%)
 Frame = -1

Query: 258 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAG 79
           HHR   E        AH G HGTH  H  E   H+   H G H +     H P H    G
Sbjct: 402 HHRHHGEHHGTHHSPAHHGEHGTHHGHHGEH--HHAPAHHGHHESHGHGHHSPAHHGHHG 459

Query: 78  QAHRS 64
           + H +
Sbjct: 460 EHHHA 464



 Score = 38.7 bits (86), Expect = 0.005
 Identities = 21/56 (37%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
 Frame = -1

Query: 258 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGV-HLAAARQGHPPHH 94
           HH    E      H  H G HGTH  H          GH G  H A A  GH  HH
Sbjct: 525 HHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHAPAHHGHHGHH 580



 Score = 37.9 bits (84), Expect = 0.008
 Identities = 24/74 (32%), Positives = 25/74 (33%), Gaps = 1/74 (1%)
 Frame = -1

Query: 267 ACGHHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGV-HLAAARQGHPPHHR 91
           A  HH    E      H  H G HGTH  H          GH G  H A A  GH  H  
Sbjct: 464 APAHHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHAPAHHGH--HGE 521

Query: 90  RGAGQAHRSQGRRA 49
            G    H  +   A
Sbjct: 522 HGTHHGHHGEHHHA 535



 Score = 35.1 bits (77), Expect = 0.059
 Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
 Frame = -1

Query: 219 HCAHQGLHGTHLRHEVEQR-VHNRQGHEGVHLAAARQGHPPHHRRGAGQAH 70
           H AH   HG H RH  E    H+   H G H       H  HH   A   H
Sbjct: 392 HAAHHDEHGVHHRHHGEHHGTHHSPAHHGEH-GTHHGHHGEHHHAPAHHGH 441



 Score = 35.1 bits (77), Expect = 0.059
 Identities = 26/79 (32%), Positives = 28/79 (35%), Gaps = 6/79 (7%)
 Frame = -1

Query: 288 HGRP*LGACGHHRVPRETSRLLRHCAHQGLHGTH--LRHEVEQRVHNRQGHE-GVHLAAA 118
           HG    G+ G H     T   L H  H G HGTH    H      H+   HE G H  A 
Sbjct: 643 HGDHHHGSHGVHHGHHGTHHSLAHHGHHGGHGTHHGAHHSPAHHGHHGAHHEHGAHHGAH 702

Query: 117 RQGHPP---HHRRGAGQAH 70
              H     HH  G    H
Sbjct: 703 HGHHDDKENHHHHGHHSKH 721



 Score = 33.5 bits (73), Expect = 0.18
 Identities = 20/67 (29%), Positives = 20/67 (29%)
 Frame = -1

Query: 258 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAG 79
           HH  P           H G HG H  H          GH G H       H P H  G  
Sbjct: 631 HHHAPHHEHHEHHGDHHHGSHGVHHGHHGTHHSLAHHGHHGGHGTHHGAHHSPAH-HGHH 689

Query: 78  QAHRSQG 58
            AH   G
Sbjct: 690 GAHHEHG 696



 Score = 32.7 bits (71), Expect = 0.31
 Identities = 18/65 (27%), Positives = 20/65 (30%)
 Frame = -1

Query: 258 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAG 79
           HH  P        H  H   HG H  H      H   G  G H       H P H    G
Sbjct: 509 HHHAPAHHGH---HGEHGTHHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHG 565

Query: 78  QAHRS 64
           + H +
Sbjct: 566 EHHHA 570



 Score = 32.7 bits (71), Expect = 0.31
 Identities = 22/69 (31%), Positives = 23/69 (33%), Gaps = 1/69 (1%)
 Frame = -1

Query: 261 GHHRVPRETSRLLRHCAHQGLHGTHL-RHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRG 85
           GHH           H  H G HG H   H      H+  GH G H   A   H  HH   
Sbjct: 588 GHHESHGHGHHAPAHHGHHGEHGVHHGHHGAGYGAHH--GHHGAHHHHA--PHHEHHEHH 643

Query: 84  AGQAHRSQG 58
               H S G
Sbjct: 644 GDHHHGSHG 652



 Score = 32.3 bits (70), Expect = 0.41
 Identities = 22/71 (30%), Positives = 24/71 (33%), Gaps = 4/71 (5%)
 Frame = -1

Query: 258 HHRVPRETSRLLRHCAHQGLHGT----HLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHR 91
           HH    E      H  H G HG+    H  HE     H+   H G H       H  HH 
Sbjct: 560 HHGHHGEHHHAPAHHGHHGHHGSHGVHHGHHESHGHGHHAPAHHGHH--GEHGVHHGHHG 617

Query: 90  RGAGQAHRSQG 58
            G G  H   G
Sbjct: 618 AGYGAHHGHHG 628



 Score = 30.3 bits (65), Expect = 1.7
 Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 2/50 (4%)
 Frame = -1

Query: 213 AHQGLHGTHLRHEVEQRVHNRQG--HEGVHLAAARQGHPPHHRRGAGQAH 70
           AH G HG H  H      H   G  H G H      GH   H   A   H
Sbjct: 622 AHHGHHGAHHHHAPHHEHHEHHGDHHHGSH--GVHHGHHGTHHSLAHHGH 669



 Score = 29.5 bits (63), Expect = 2.9
 Identities = 19/67 (28%), Positives = 21/67 (31%), Gaps = 1/67 (1%)
 Frame = -1

Query: 258 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQG-HPPHHRRGA 82
           HH  P        H      HG H  H          GH G H + A  G H  HH   A
Sbjct: 461 HHHAPAHHGHHGEHHHAPAHHGHHGEH------GTHHGHHGSHHSPAHHGHHGEHHHAPA 514

Query: 81  GQAHRSQ 61
              H  +
Sbjct: 515 HHGHHGE 521



 Score = 29.1 bits (62), Expect = 3.9
 Identities = 15/51 (29%), Positives = 17/51 (33%)
 Frame = -1

Query: 213 AHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQ 61
           AH G HG H         H   G  GVH     + H   H   A   H  +
Sbjct: 559 AHHGHHGEHHHAPAHHGHHGHHGSHGVH-HGHHESHGHGHHAPAHHGHHGE 608



 Score = 29.1 bits (62), Expect = 3.9
 Identities = 16/51 (31%), Positives = 18/51 (35%), Gaps = 1/51 (1%)
 Frame = -1

Query: 219 HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHH-RRGAGQAH 70
           H  H G H +H         H   G  GVH      G+  HH   GA   H
Sbjct: 583 HGVHHGHHESHGHGHHAPAHHGHHGEHGVHHGHHGAGYGAHHGHHGAHHHH 633



 Score = 27.9 bits (59), Expect = 8.9
 Identities = 19/70 (27%), Positives = 22/70 (31%), Gaps = 4/70 (5%)
 Frame = -1

Query: 261 GHHRVPRETSRLLRHCAHQGLH----GTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHH 94
           G H  P        H  H G H      H  HE     H+   H G H       H P H
Sbjct: 411 GTHHSPAHHGEHGTHHGHHGEHHHAPAHHGHHESHGHGHHSPAHHGHH---GEHHHAPAH 467

Query: 93  RRGAGQAHRS 64
               G+ H +
Sbjct: 468 HGHHGEHHHA 477



 Score = 27.9 bits (59), Expect = 8.9
 Identities = 17/68 (25%), Positives = 20/68 (29%), Gaps = 3/68 (4%)
 Frame = -1

Query: 258 HHRVPRETSRLLRHCAHQGLHG---THLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRR 88
           HH  P        H  H G HG   +   H      H+   H G H      G    H  
Sbjct: 532 HHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHAPAHHGHHGHHGSHGVHHGHHE 591

Query: 87  GAGQAHRS 64
             G  H +
Sbjct: 592 SHGHGHHA 599


>AF125964-1|AAD14753.1|  471|Caenorhabditis elegans Hypothetical
           protein W03G1.5 protein.
          Length = 471

 Score = 33.5 bits (73), Expect = 0.18
 Identities = 19/56 (33%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
 Frame = -1

Query: 219 HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGH--PPHHRRGAGQAHRSQG 58
           HC   G HG H       R H   G  G      R GH  PPHH    G++    G
Sbjct: 361 HCP--GRHGRHGSRSHSPRGHGHGGRHGPPHCPGRHGHHGPPHHHHHDGRSPSRHG 414



 Score = 29.5 bits (63), Expect(2) = 0.43
 Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
 Frame = -1

Query: 219 HC-AHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHH 94
           HC    G HG    H  + R  +R GH   H    R   PPHH
Sbjct: 389 HCPGRHGHHGPPHHHHHDGRSPSRHGHHHHHHHGCRP-FPPHH 430



 Score = 28.3 bits (60), Expect = 6.7
 Identities = 17/51 (33%), Positives = 18/51 (35%), Gaps = 1/51 (1%)
 Frame = -1

Query: 204 GLHGTHLRH-EVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQGR 55
           G HG H RH         R GH G     +R G P       G  H   GR
Sbjct: 283 GRHGGHGRHGSCSGSPRGRHGHGGHGGHGSRSGSPGGRHGHGGSGHHRGGR 333



 Score = 21.4 bits (43), Expect(2) = 0.43
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = -1

Query: 105 PPHHRRGAGQAHRSQGRRA 49
           PPH R G    H   G R+
Sbjct: 450 PPHRRGGHCHHHHHNGHRS 468


>U97189-1|AAC48164.1|  623|Caenorhabditis elegans Hypothetical
           protein C48B6.4 protein.
          Length = 623

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 6/50 (12%)
 Frame = -1

Query: 519 GRFTIHRITPEEAKYKLCKVKRVATGPKNVP-----YLVTHDGRTIR-YP 388
           G+  + R+T  E  Y+ CK+++ A   K VP     Y+V H  R I+ YP
Sbjct: 302 GQIIVRRLTDPEYPYRHCKIQKFAVRCKLVPENYGWYVVWHCQRDIQEYP 351


>Z81579-4|CAE17915.1|  212|Caenorhabditis elegans Hypothetical
           protein R13H4.8 protein.
          Length = 212

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 16/40 (40%), Positives = 17/40 (42%)
 Frame = +2

Query: 71  CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRC 190
           C C  PR     C CR    C  +C C   TRC T  R C
Sbjct: 86  CCCCRPRCC---CCCRRCCTCCRTCCC---TRCCTCCRPC 119


>Z66499-4|CAA91301.1|  164|Caenorhabditis elegans Hypothetical
           protein T01B7.8 protein.
          Length = 164

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 16/40 (40%), Positives = 17/40 (42%)
 Frame = +2

Query: 71  CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRC 190
           C C  PR     C CR    C  +C C   TRC T  R C
Sbjct: 84  CCCCRPRCC---CCCRRCCTCCRTCCC---TRCCTCCRPC 117


>U55854-7|AAK68158.1|  166|Caenorhabditis elegans Hypothetical
           protein C04G6.10 protein.
          Length = 166

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 16/40 (40%), Positives = 17/40 (42%)
 Frame = +2

Query: 71  CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRC 190
           C C  PR     C CR    C  +C C   TRC T  R C
Sbjct: 85  CCCCRPRCC---CCCRRCCTCCRTCCC---TRCCTCCRPC 118


>U55854-6|AAK68161.1|  197|Caenorhabditis elegans Hypothetical
           protein C04G6.7 protein.
          Length = 197

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 16/40 (40%), Positives = 17/40 (42%)
 Frame = +2

Query: 71  CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRC 190
           C C  PR     C CR    C  +C C   TRC T  R C
Sbjct: 86  CCCCRPRCC---CCCRRCCTCCRTCCC---TRCCTCCRPC 119


>AL110490-13|CAB54454.1|  377|Caenorhabditis elegans Hypothetical
           protein Y48B6A.13b protein.
          Length = 377

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = -1

Query: 300 LVYDHGRP*LGACGHHRVPRETSRLLRH 217
           LV+D GR  +G+    R  RETS+LL+H
Sbjct: 207 LVFDDGRKKVGSSEGMRRSRETSQLLKH 234


>AL110490-12|CAB54447.1|  326|Caenorhabditis elegans Hypothetical
           protein Y48B6A.13a protein.
          Length = 326

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = -1

Query: 300 LVYDHGRP*LGACGHHRVPRETSRLLRH 217
           LV+D GR  +G+    R  RETS+LL+H
Sbjct: 156 LVFDDGRKKVGSSEGMRRSRETSQLLKH 183


>Z74028-3|CAA98425.1| 1908|Caenorhabditis elegans Hypothetical
           protein C14C10.5 protein.
          Length = 1908

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 20/94 (21%), Positives = 42/94 (44%)
 Frame = +1

Query: 253 MVPTRPKLRPPVIIHKFPELKLDEVHNLRSCNV*LDGIVDFDKWVWIADGAAIMRYQVRN 432
           M+    K  P +   KF +L + ++    +     D  V+F    WI+  + +++   + 
Sbjct: 680 MMQVACKFHPEIAFQKFFKLIISKLQGCITPEFYTDEKVEFGTLWWISIASRMIKVHPK- 738

Query: 433 ILRSGRHTLDFTQLVLSLLRGDTVDCESALNIID 534
           +L    H ++    ++  L+  T   E ALN++D
Sbjct: 739 LLLDNWHLVETLMDLVMPLKKCTTATEKALNVLD 772


>Z81573-1|CAB04625.3|  909|Caenorhabditis elegans Hypothetical
           protein M02G9.1 protein.
          Length = 909

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
 Frame = +2

Query: 107 CPCRAAARCTPSCP-CRL*TRCS-TSWRRCVP 196
           C C+ A  C P CP   + + CS T  R C+P
Sbjct: 54  CSCQQAPICQPQCPRAEINSDCSATCVRACIP 85


>Z69302-8|CAA93261.3|  420|Caenorhabditis elegans Hypothetical
           protein F40F8.5 protein.
          Length = 420

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 1/64 (1%)
 Frame = -1

Query: 234 SRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQG-HPPHHRRGAGQAHRSQG 58
           +R  RH  H+G HG  ++H           H   H    R G H P+        H  + 
Sbjct: 84  ARRRRHHNHEGHHGNDMKHRENMDRKKHGTHVDHHGRVRRNGDHDPNDPNVDHTGHNHRV 143

Query: 57  RRAV 46
           +R++
Sbjct: 144 KRSI 147


>U58760-7|AAK31463.1|  188|Caenorhabditis elegans Hypothetical
           protein C27A2.5 protein.
          Length = 188

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 15/40 (37%), Positives = 17/40 (42%)
 Frame = +2

Query: 71  CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRC 190
           C C  P+     C CR    C  +C C   TRC T  R C
Sbjct: 85  CCCCRPKCC---CCCRRCCTCCRTCCC---TRCCTCCRPC 118


>AC084154-12|AAK29876.1| 1137|Caenorhabditis elegans Hypothetical
            protein Y22D7AR.12 protein.
          Length = 1137

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 18/73 (24%), Positives = 31/73 (42%)
 Frame = -1

Query: 510  TIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKI 331
            T+ R    + +Y  C V      P NV   +  +G T++  D   + ND +++ +   K 
Sbjct: 888  TLPRSNTSDDEYDACSVYV----PDNVGEELKFEGVTMKCTDCKKEFNDEVEIRVVVVKF 943

Query: 330  MDFIKFEFGELVY 292
             D  +F F    Y
Sbjct: 944  DDLKEFTFNHYWY 956


>AC024792-1|AAK84610.1|  938|Caenorhabditis elegans Importin beta
            family protein 5 protein.
          Length = 938

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 16/55 (29%), Positives = 23/55 (41%)
 Frame = +2

Query: 362  ESLTLISGSG*RMVRPSCVTKYGTFLGPVATRLTLHNLYLASSGVIRWIVNLPLT 526
            E  ++ +  G   V P C   Y     PVA  +  H  Y A + ++R   N P T
Sbjct: 868  EQASMYNAEG-EFVNPFCRLSYAPKQPPVAANIANHKAYFAQAVLVRGPGNCPET 921


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,014,374
Number of Sequences: 27780
Number of extensions: 397022
Number of successful extensions: 1161
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1129
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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