Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP05_T7_P13
(798 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 25 0.81
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 24 1.4
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 24 1.4
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 24 1.9
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 24 1.9
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 23 2.5
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 2.5
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 22 5.7
AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein. 22 5.7
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 22 7.6
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 22 7.6
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 25.0 bits (52), Expect = 0.81
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -3
Query: 241 RDIPAPSTLCTSRTPRDTPSP 179
RD+P ST T+ RDT +P
Sbjct: 137 RDLPGKSTTTTAEVKRDTINP 157
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 24.2 bits (50), Expect = 1.4
Identities = 11/44 (25%), Positives = 16/44 (36%)
Frame = -1
Query: 210 HQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAG 79
H G G + H H+R G + + R P G+G
Sbjct: 1755 HSGTMGPPVGHPTNASAHSRSGSQSMPRQNGRYSRVPSQGGGSG 1798
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 24.2 bits (50), Expect = 1.4
Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 4/43 (9%)
Frame = -1
Query: 210 HQGLHGT-HLRHEVEQRVHNRQGHEGVHL---AAARQGHPPHH 94
H +H T H H H++ H AA + GH PHH
Sbjct: 423 HSHIHATPHHHHSHAATPHHQHSTPLAHSSYPAAIQIGHTPHH 465
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.8 bits (49), Expect = 1.9
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -3
Query: 241 RDIPAPSTLCTSRTPRDTPSP 179
RD+P ST T RDT +P
Sbjct: 137 RDLPGKSTTTTVEVKRDTINP 157
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 23.8 bits (49), Expect = 1.9
Identities = 10/32 (31%), Positives = 21/32 (65%)
Frame = +1
Query: 481 SLLRGDTVDCESALNIID*TKQFISLLN*DNI 576
SLL+ +TV C+ A++++ + +++ DNI
Sbjct: 381 SLLKENTVTCQEAMHMLKNADSQLLVISDDNI 412
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 23.4 bits (48), Expect = 2.5
Identities = 17/63 (26%), Positives = 30/63 (47%)
Frame = +1
Query: 370 DFDKWVWIADGAAIMRYQVRNILRSGRHTLDFTQLVLSLLRGDTVDCESALNIID*TKQF 549
D +WI G +M + + R G+ + T L+ ++L + CE +NI K +
Sbjct: 57 DVHVMIWIGFGF-LMTF----LRRYGQSAVGLTFLLGAILVQVAIICEGVMNIQKDNKSY 111
Query: 550 ISL 558
+SL
Sbjct: 112 LSL 114
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 23.4 bits (48), Expect = 2.5
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = -1
Query: 186 LRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQGRR 52
++ E QR H+ Q H + A Q H +++ Q R Q R+
Sbjct: 133 IKQETLQRHHHLQNHHHHLQSTAVQDHHRPYQQQQQQQQRQQQRQ 177
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 22.2 bits (45), Expect = 5.7
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +3
Query: 207 DVHNVEGAGMSLAGHD 254
DVH V GAG + HD
Sbjct: 110 DVHGVIGAGHWIGDHD 125
>AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein.
Length = 615
Score = 22.2 bits (45), Expect = 5.7
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 5/50 (10%)
Frame = -1
Query: 429 PYLVTHDGRTIRYPDP-----LIKVNDSIQLDIATTKIMDFIKFEFGELV 295
P L H R +R D +I N +++ + DFIK ++GEL+
Sbjct: 563 PRLKVHGIRGLRVADASVQPQVISGNPVASVNMVGERAADFIKEDWGELL 612
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 21.8 bits (44), Expect = 7.6
Identities = 11/38 (28%), Positives = 16/38 (42%)
Frame = -2
Query: 230 GSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPR 117
G F VH+ T F T + + + + YI L R
Sbjct: 271 GDFQPVHVHKQTAIAFRTPTYRMQQVEQPVQVYIQLKR 308
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 21.8 bits (44), Expect = 7.6
Identities = 11/38 (28%), Positives = 16/38 (42%)
Frame = -2
Query: 230 GSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPR 117
G F VH+ T F T + + + + YI L R
Sbjct: 271 GDFQPVHVHKQTAIAFRTPTYRMQQVEQPVQVYIQLKR 308
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,201
Number of Sequences: 438
Number of extensions: 4827
Number of successful extensions: 17
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25246416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -