Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP05_T7_P10
(791 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_06_0281 + 26912419-26913099 33 0.20
11_07_0002 - 27171791-27172222 32 0.60
09_02_0279 + 6702517-6702948 32 0.60
07_03_1573 + 27829967-27830338,27830821-27831510,27831594-278317... 31 1.4
02_01_0302 - 2021221-2023305 30 1.8
11_01_0763 + 6402901-6403971,6404581-6404826 30 2.4
07_03_0274 - 16155728-16156180,16156542-16156958,16157044-16157520 30 2.4
04_03_0849 + 20265511-20265984,20266452-20266617,20266694-202669... 29 3.2
09_01_0043 + 790859-790873,791410-791603,792521-792605,792719-79... 29 4.2
07_03_1389 + 26212117-26212119,26212721-26212875,26213402-262134... 29 4.2
07_03_0111 + 13535912-13535972,13536081-13536142,13536418-135365... 29 4.2
01_06_0752 + 31704071-31704787 29 4.2
11_08_0092 - 28307180-28307380,28307471-28307936,28308008-283081... 29 5.6
07_03_0603 - 19890664-19890823,19891104-19891329,19891498-198916... 28 7.4
01_01_0386 - 2985563-2985986,2986301-2986390,2986529-2986668,298... 28 7.4
11_06_0610 - 25449085-25453284 28 9.8
08_02_1035 - 23840606-23841109,23841194-23841199 28 9.8
03_06_0199 + 32310272-32311432 28 9.8
03_03_0164 - 14979364-14979479,14979613-14980102 28 9.8
>05_06_0281 + 26912419-26913099
Length = 226
Score = 33.5 bits (73), Expect = 0.20
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +1
Query: 238 QPDGAAHPKDAQPTEPSRRIEGSETSAVSVRQPVGPPRRCRWCPGIPRWTRTSLPGRD 411
+P G P + P P+ ++ +R+P GP W PG+P T+T L G D
Sbjct: 82 RPVGPTPPPPSHPVVPTPTQLAADDDGGLLRRPGGPTPPSPWHPGVP--TQTQLAGGD 137
>11_07_0002 - 27171791-27172222
Length = 143
Score = 31.9 bits (69), Expect = 0.60
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = -3
Query: 429 RSTVYRVPTRQAGSGPAGYSGTPAAPSGRPDG----LPYRDGRRF 307
RS+ + +AGS PAG G+PA G P G P GR F
Sbjct: 55 RSSAASTSSARAGSTPAGVRGSPAGAGGSPGGGSGSTPVGGGRSF 99
>09_02_0279 + 6702517-6702948
Length = 143
Score = 31.9 bits (69), Expect = 0.60
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = -3
Query: 429 RSTVYRVPTRQAGSGPAGYSGTPAAPSGRPDG----LPYRDGRRF 307
RS+ + +AGS PAG G+PA G P G P GR F
Sbjct: 55 RSSAASTSSARAGSTPAGVRGSPAGAGGSPGGGSGSTPVGGGRSF 99
>07_03_1573 +
27829967-27830338,27830821-27831510,27831594-27831781,
27832286-27832318,27832364-27832605,27833178-27833320,
27833649-27833825,27834104-27834256,27834639-27834694,
27834998-27835157,27835301-27835348
Length = 753
Score = 30.7 bits (66), Expect = 1.4
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Frame = +3
Query: 120 PKDFRTHPLNDSPXTLTPDVRSPPRSEPG*GRG---ATAVNTTTRRRGSPQGRPA 275
PK T N +P P R+PP PG G G + ++ RRRG P G A
Sbjct: 24 PKPKPTPIRNPTPPPPPPRRRTPPPPPPGSGPGPQRPSYLSVALRRRGPPAGSAA 78
>02_01_0302 - 2021221-2023305
Length = 694
Score = 30.3 bits (65), Expect = 1.8
Identities = 33/123 (26%), Positives = 45/123 (36%), Gaps = 3/123 (2%)
Frame = +3
Query: 138 HPLNDSPXTLTPDVRSP-PRSEPG*G-RGATA-VNTTTRRRGSPQGRPADGAFEANRRL* 308
HP + S +P P PG G +G A V++ RRRG P+ +
Sbjct: 371 HPFDCSKAQCQAASYTPTPGGSPGRGGQGPPAPVSSPPRRRGPYPQPPSSSPTPSYPSPS 430
Query: 309 NVGRLGTAARRAAQTVPLVSRNTPLDQNQPAGSGRDTPSTGRSNHSTAAR*SAGSAPHGL 488
+ + + P S TP + P GS TPS N + S S P
Sbjct: 431 SSYPAPPGSNTPSYPSPPSSATTPSSHSPPGGSSSTTPSYPSPNGGKPSTPSHPSPPGST 490
Query: 489 TPS 497
TPS
Sbjct: 491 TPS 493
>11_01_0763 + 6402901-6403971,6404581-6404826
Length = 438
Score = 29.9 bits (64), Expect = 2.4
Identities = 26/83 (31%), Positives = 31/83 (37%), Gaps = 2/83 (2%)
Frame = +3
Query: 108 ADRGPKDFRTHPLNDSPXTLTP--DVRSPPRSEPG*GRGATAVNTTTRRRGSPQGRPADG 281
A+ P + P + SP P D G GRGA R RG G DG
Sbjct: 21 AEADPSEETLDPASPSPDLAIPWPDPAGVDAGGGG-GRGAATHQGRRRWRGVGSGGGGDG 79
Query: 282 AFEANRRL*NVGRLGTAARRAAQ 350
A + RRL AA R A+
Sbjct: 80 AATSRRRLARQPAAAVAAARCAR 102
>07_03_0274 - 16155728-16156180,16156542-16156958,16157044-16157520
Length = 448
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -2
Query: 763 PXPFSVXERPLAAARRGYDARQRGVLEGDARLL 665
P P S P AAARR A R V+E +AR +
Sbjct: 46 PPPTSAPLAPAAAARRELSAASRAVVEDEARYI 78
>04_03_0849 +
20265511-20265984,20266452-20266617,20266694-20266905,
20267154-20267647,20267732-20267780,20267922-20268251
Length = 574
Score = 29.5 bits (63), Expect = 3.2
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +1
Query: 319 VSVRQPVGPPRRCRWCPGIPRWTR 390
+ + + V PP R WCP RW R
Sbjct: 1 MEIARVVAPPLRLAWCPASRRWGR 24
>09_01_0043 +
790859-790873,791410-791603,792521-792605,792719-793075
Length = 216
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -3
Query: 399 QAGSGPAGYSGTPAAPSGRPDGLPYRDG 316
++GSG AG G+ A GR DG RDG
Sbjct: 118 RSGSGKAGCVGSRADQDGRLDGREVRDG 145
>07_03_1389 +
26212117-26212119,26212721-26212875,26213402-26213479,
26214211-26214375,26214453-26214554,26214661-26214786,
26215454-26215490
Length = 221
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 176 RPIPSEVRTRMR*GGYRGQHYNQTARLTPR 265
R PSE+R+R R G RG+ Y+Q +PR
Sbjct: 121 RKKPSEMRSRDRISGSRGRSYDQRYSRSPR 150
>07_03_0111 +
13535912-13535972,13536081-13536142,13536418-13536510,
13537577-13537649,13537876-13538265,13538337-13538404,
13539334-13539375,13540211-13540735,13540817-13540974,
13541078-13541636,13542438-13542500,13542579-13542680,
13542779-13543096,13543175-13543267,13543489-13543590,
13543678-13543782,13544190-13544323,13545097-13545280,
13545701-13545832,13546215-13546327,13546468-13546558,
13547138-13549339
Length = 1889
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +3
Query: 156 PXTLTPDVRSPPRSEPG*GRGATAVNTTTRRRGSPQGRPADGAFEA 293
P D + P EP + +A T RR GSP PA A +A
Sbjct: 129 PPPSPKDAAADPAKEPSGSKAGSAAATGGRRTGSPPPSPAPVAKDA 174
>01_06_0752 + 31704071-31704787
Length = 238
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = +1
Query: 550 RTGVFPPPAPGSTATDRC 603
R GV PPP P STA RC
Sbjct: 159 RAGVEPPPPPPSTAAARC 176
>11_08_0092 -
28307180-28307380,28307471-28307936,28308008-28308117,
28308206-28308493,28309024-28309059
Length = 366
Score = 28.7 bits (61), Expect = 5.6
Identities = 25/85 (29%), Positives = 32/85 (37%), Gaps = 1/85 (1%)
Frame = +1
Query: 181 DPLRGQNPDEVGGLPRSTLQPDGAAHPKDAQPTEPSRRIEGSETSAVSVRQPVGPPRRCR 360
D + G+ PD QP A P+D QP PS + TS R+ G
Sbjct: 188 DAVHGEQPDGERDADEHRGQPHQRAAPRDVQPPSPSS--SPATTSPAHPRRAHGQVLLGS 245
Query: 361 WCPGIPRW-TRTSLPGRDAIHRRPV 432
P P W + LP R R P+
Sbjct: 246 H-PRGPHWRVQGHLPQRQGPRRVPI 269
>07_03_0603 -
19890664-19890823,19891104-19891329,19891498-19891636,
19891849-19891942,19892291-19892311,19892506-19892941,
19893133-19893280,19893369-19893476,19893543-19893659,
19893960-19894016,19894488-19894553,19895140-19895328,
19895410-19895523,19895684-19895766,19895857-19896322,
19896832-19897476
Length = 1022
Score = 28.3 bits (60), Expect = 7.4
Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = +3
Query: 141 PLNDSPXTLTPDVRSPP--RSEPG*GRGATAVNTTTRRRGSPQGRPADGAFEA 293
P D TP+ R+PP +S + TTRRR P P GA A
Sbjct: 11 PFRDLSNLRTPNPRAPPNPKSSASKEEPLPSATPTTRRRRGPPPPPRPGAATA 63
>01_01_0386 -
2985563-2985986,2986301-2986390,2986529-2986668,
2986798-2986893,2987003-2987042,2987760-2987887
Length = 305
Score = 28.3 bits (60), Expect = 7.4
Identities = 25/99 (25%), Positives = 37/99 (37%)
Frame = +3
Query: 189 PRSEPG*GRGATAVNTTTRRRGSPQGRPADGAFEANRRL*NVGRLGTAARRAAQTVPLVS 368
P G RG + + +R Q D E R R + R +++
Sbjct: 144 PSPRRGRSRGRSYSRSRSRSYSRSQSPRRDSRNERRSRSPRDSRSPRGSPRDSRS----P 199
Query: 369 RNTPLDQNQPAGSGRDTPSTGRSNHSTAAR*SAGSAPHG 485
R +P D P GS RDT S S + + + S P+G
Sbjct: 200 RGSPRDSRSPKGSPRDTQSPRGSPRDSRSPRRSASPPNG 238
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 27.9 bits (59), Expect = 9.8
Identities = 21/78 (26%), Positives = 31/78 (39%), Gaps = 1/78 (1%)
Frame = +1
Query: 184 PLRGQNPDEVGGLPRSTLQ-PDGAAHPKDAQPTEPSRRIEGSETSAVSVRQPVGPPRRCR 360
P + P+E P S + P AHP P+E S E+S + + PP
Sbjct: 770 PPKSSPPEEKSPPPHSPEKSPPSEAHPTSPPPSEKSPPTPAEESSPPTPEKSPSPPSGHE 829
Query: 361 WCPGIPRWTRTSLPGRDA 414
P P ++S P +A
Sbjct: 830 GTPPSP--VKSSSPPPEA 845
>08_02_1035 - 23840606-23841109,23841194-23841199
Length = 169
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2
Query: 205 PGSDLGGDRTSGVRVXGESFSGWVLKSLG 119
PG+ GG+RT G V E++ V +LG
Sbjct: 35 PGAGAGGERTGGSAVGAEAWGDGVAAALG 63
>03_06_0199 + 32310272-32311432
Length = 386
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -2
Query: 82 SHIPRAPLLRGDLVGGSALYPKKKKK 5
S PR PLLRG + GGSA + + +K
Sbjct: 203 SREPRVPLLRGGIRGGSAAHLQDGQK 228
>03_03_0164 - 14979364-14979479,14979613-14980102
Length = 201
Score = 27.9 bits (59), Expect = 9.8
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +1
Query: 190 RGQNPDEVGGLPRSTLQPDGAAHPKDAQPTEPSRRIE-GSETSAVSVRQPVGPPRRCR 360
RG+ G +T+ DG+ H + P P R + G E V+ P G RR R
Sbjct: 83 RGRRRQRRGPGTATTMLEDGSIHTQRGSPPLPPRSGQRGGEEGEVAAAAPGGGGRRWR 140
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,238,613
Number of Sequences: 37544
Number of extensions: 494211
Number of successful extensions: 1845
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1840
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2138915688
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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