Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP05_T7_P06
(795 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 29 0.58
SPAC2F3.15 |lsk1||latrunculin sensitive kinase Lsk1 |Schizosacch... 28 1.3
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 28 1.3
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 28 1.8
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 27 2.3
SPAC22G7.02 |kap111||karyopherin Kap111|Schizosaccharomyces pomb... 27 2.3
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 3.1
SPAC15A10.01 |atm1|SPAC8C9.18|ABC family iron transporter Atm1|S... 27 3.1
SPCC550.07 |||acetamidase |Schizosaccharomyces pombe|chr 3|||Manual 27 3.1
SPAC2E1P3.05c |||fungal cellulose binding domain protein|Schizos... 27 4.1
SPAC16E8.09 |scd1|ral1|RhoGEF Scd1|Schizosaccharomyces pombe|chr... 27 4.1
SPAC4A8.11c |fas2|lsd1|fatty acid synthase alpha subunit Lsd1 |S... 26 5.4
SPBC3B8.11 |rrn6||RNA polymerase I transcription factor subunit ... 26 5.4
SPCC550.03c |||RNA helicase involved in mRNA catabolism|Schizosa... 26 5.4
SPBP35G2.10 |mit1||SHREC complex subunit Mit1|Schizosaccharomyce... 26 5.4
SPAC5D6.07c |||PXA domain protein|Schizosaccharomyces pombe|chr ... 26 5.4
SPBC651.06 |mug166||sequence orphan|Schizosaccharomyces pombe|ch... 26 7.1
SPAC1F7.05 |cdc22||ribonucleoside reductase large subunit Cdc22|... 26 7.1
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 25 9.4
SPAPB1A10.04c |cwp1||geranylgeranyltransferase I alpha subunit C... 25 9.4
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 29.5 bits (63), Expect = 0.58
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +2
Query: 389 SGMPLNLSNSTSAS*DTVSNALAKSSTAT*HSRSFFLLSPSTASST--AEFSSVPSAQIN 562
S PL+ +NST+A+ + + + +ST T + S L S S+A+ST SS P + +N
Sbjct: 288 SSTPLSSANSTTATSASSTPLTSVNSTTTTSASSTPLSSVSSANSTTATSTSSTPLSSVN 347
Score = 27.1 bits (57), Expect = 3.1
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +2
Query: 389 SGMPLNLSNSTSAS*DTVSNALAKSSTAT*HSRSFFLLSPSTASSTAEFSSVPSAQIN 562
S PL+ +NST+A+ S L+ ++ T S S LS +++ SS P +N
Sbjct: 421 SSTPLSSANSTTAT-SASSTPLSSVNSTTATSASSTPLSSVNSTTATSASSTPLTSVN 477
Score = 26.6 bits (56), Expect = 4.1
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +2
Query: 410 SNSTSAS*DTVSNALAKSSTAT*HSRSFFLLSPSTASSTAEFSSVPSAQINPRCRAS 580
++S+ S S++LA SST + S + S S ASS+ SS+ S+ AS
Sbjct: 105 TSSSLTSSSATSSSLASSSTTSSSLASSSITSSSLASSSITSSSLASSSTTSSSLAS 161
>SPAC2F3.15 |lsk1||latrunculin sensitive kinase Lsk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 593
Score = 28.3 bits (60), Expect = 1.3
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = +2
Query: 20 SCGGHPVS*TEPRFSCNSG-VGPSAYRHSPQQRWTPASLPSTPQAGLGRQH-RPERTRVP 193
S GGH +S F NS + PS+ P+++ + + RQH RP R+R
Sbjct: 37 SLGGHTLS--SNAFKNNSSSISPSSSAKDPREQRKRTFPLNDTHSSRARQHERPFRSRKS 94
Query: 194 SPTYTRPSPAGKPGWGPSP 250
+ + + +PG PSP
Sbjct: 95 RRRKGKKAFSPRPGSPPSP 113
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 28.3 bits (60), Expect = 1.3
Identities = 18/67 (26%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +2
Query: 410 SNSTSAS*DTVSNALAKSSTAT*HSRSFFLLSPSTASSTAEFSSVP-SAQINPRCRASGG 586
S+S+S+S + S++ + S+++ S S SPS++ S+++FSS P +S G
Sbjct: 180 SSSSSSSKSSSSSSSSSKSSSSSSSSSKSSASPSSSKSSSKFSSSSFITSTTPASSSSSG 239
Query: 587 QLANSLR 607
+ ++ +
Sbjct: 240 AIVSNAK 246
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 27.9 bits (59), Expect = 1.8
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +2
Query: 389 SGMPLNLSNSTSAS*DTVSNALAKSSTAT*HSRSFFLLSPSTASST-AEFSSVPSA 553
S P + S++ S+S + S+ + S+++ S S F SP+++SST + SS PS+
Sbjct: 297 SSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSSSFSSSPTSSSSTISSSSSSPSS 352
Score = 25.8 bits (54), Expect = 7.1
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +2
Query: 377 PQNCSGMPLNLSNSTSAS*DTVSNALAKSSTAT*HSRSFFLLSPSTASSTAEFSSVPSA 553
P + P + +S+ +VS+A+ SST+ S S LS S +++ FSS+ S+
Sbjct: 123 PTSSEYTPSSTESSSLLDPSSVSSAILPSSTSVEVSISSSSLSSSDPLTSSTFSSLSSS 181
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 27.5 bits (58), Expect = 2.3
Identities = 7/14 (50%), Positives = 13/14 (92%)
Frame = -2
Query: 554 APTVRWRIPQYWTR 513
AP+V+WR+P++W +
Sbjct: 191 APSVKWRMPRFWLK 204
>SPAC22G7.02 |kap111||karyopherin Kap111|Schizosaccharomyces pombe|chr
1|||Manual
Length = 990
Score = 27.5 bits (58), Expect = 2.3
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = -2
Query: 563 DLSAPTVRWRIPQYWTRCLGIAGRSCGNVTW 471
DL ++ ++ Q+W C G+ GN +W
Sbjct: 958 DLLKARIKDKVKQFWILCKGLESTPYGNSSW 988
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 27.1 bits (57), Expect = 3.1
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +2
Query: 125 ASLPSTPQAGLGRQHRPERTRVPSPTYTRPSPAGKP 232
A P TPQ+ L RP + P P+ PSPA P
Sbjct: 127 APAPPTPQSEL----RPPTSAPPRPSIPPPSPASAP 158
>SPAC15A10.01 |atm1|SPAC8C9.18|ABC family iron transporter
Atm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 693
Score = 27.1 bits (57), Expect = 3.1
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 450 PWRSLAPPRDIPAASSCYPQAPRPVLRNS 536
PW+ ++ PR+IPA S + VLR S
Sbjct: 6 PWKLISSPRNIPARSFLNSRGTYLVLRKS 34
>SPCC550.07 |||acetamidase |Schizosaccharomyces pombe|chr 3|||Manual
Length = 533
Score = 27.1 bits (57), Expect = 3.1
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +3
Query: 435 TLCQMPWRSLAPPRDI 482
+L MPWRS+APP+ +
Sbjct: 298 SLLPMPWRSVAPPKTL 313
>SPAC2E1P3.05c |||fungal cellulose binding domain
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 197
Score = 26.6 bits (56), Expect = 4.1
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +2
Query: 395 MPLNLSNSTSAS*DTVSNALAKSSTAT*HSRSFFLLSPSTASSTAEFSSVPS 550
+P+++ S+S+S S SS++ S + SPS SST S+ S
Sbjct: 104 IPVDIDPSSSSSSAASSTTSTTSSSSLVSSTTLTSSSPSAVSSTTSIPSISS 155
>SPAC16E8.09 |scd1|ral1|RhoGEF Scd1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 872
Score = 26.6 bits (56), Expect = 4.1
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = +1
Query: 475 VTFPQLLPAIPKHRVQYCGILQRTV 549
+TF +LL + +H+++ CGIL++ V
Sbjct: 794 ITFDELLAKV-EHKIKLCGILKQAV 817
>SPAC4A8.11c |fas2|lsd1|fatty acid synthase alpha subunit Lsd1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1842
Score = 26.2 bits (55), Expect = 5.4
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = +2
Query: 122 PASLPSTPQAGLGRQHRPERTRVPSPTYTRPSPAGKPGWGP 244
PAS STP+ P T P+P T A P P
Sbjct: 105 PASTSSTPKVETAAAAAPAATPAPAPAQTSAPAAALPDEPP 145
>SPBC3B8.11 |rrn6||RNA polymerase I transcription factor subunit
Rrn6 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 868
Score = 26.2 bits (55), Expect = 5.4
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = -1
Query: 468 VLDFAKAFDTVSHEALVELLRL 403
V DF +AFD+++H+ ++ L L
Sbjct: 615 VPDFVEAFDSINHDVIITLSEL 636
>SPCC550.03c |||RNA helicase involved in mRNA
catabolism|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1213
Score = 26.2 bits (55), Expect = 5.4
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -3
Query: 652 SITSIPPETLSLHLGPE 602
SI S+PP TL+LH P+
Sbjct: 236 SIVSLPPSTLNLHKQPD 252
>SPBP35G2.10 |mit1||SHREC complex subunit Mit1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1418
Score = 26.2 bits (55), Expect = 5.4
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -1
Query: 660 DRSRSRRFPLRHFHSILARRLLASCPPD 577
D S S++ HF SILA+ LLA+ P +
Sbjct: 1209 DESDSQKSADVHFDSILAKSLLATTPKE 1236
>SPAC5D6.07c |||PXA domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 495
Score = 26.2 bits (55), Expect = 5.4
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -3
Query: 682 QVDPGEYRPISITSIPPETLSLHLGPEAV 596
++ P +++ I ITS PP L+L G +V
Sbjct: 330 ELSPSKFKSIPITSNPPPMLNLSKGSTSV 358
>SPBC651.06 |mug166||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 234
Score = 25.8 bits (54), Expect = 7.1
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = +2
Query: 401 LNLSNSTSAS*DTVSNALAKSSTAT*HSRSFFLLSPSTASSTAEFSSVPSA 553
LNL S SN+ +T R FF P T+S+T SS S+
Sbjct: 86 LNLERSLLNYKSLKSNSTTTVATVPSEKRYFFRRKPKTSSTTNSLSSSSSS 136
>SPAC1F7.05 |cdc22||ribonucleoside reductase large subunit
Cdc22|Schizosaccharomyces pombe|chr 1|||Manual
Length = 811
Score = 25.8 bits (54), Expect = 7.1
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -3
Query: 493 EAAGMSRGGARLRQGI*HSVSRGTCRIAEVEG 398
E+AG + ++ + I H+ +C IA+VEG
Sbjct: 519 ESAGAKKLNIQIFETIYHAALEASCEIAQVEG 550
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 25.4 bits (53), Expect = 9.4
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +2
Query: 173 PERTRVPSPTYTRPSPAGKPGWGPSPR*RVSATEGP 280
P VP P P PAG P P P SA P
Sbjct: 1709 PPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
>SPAPB1A10.04c |cwp1||geranylgeranyltransferase I alpha subunit
Cwp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 294
Score = 25.4 bits (53), Expect = 9.4
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -1
Query: 585 PPDARQRGFICADGTLENS--AVLDAVLGDSRKKLRECHVAVLDFAKAFDTVSHEALVEL 412
P + ++C G L+ S + LD ++ + RK L H +L+F ++ S E + +
Sbjct: 215 PDNQSAWNYLC--GVLDKSGPSKLDNLIANLRKNLPALHKPLLEFLAMYEPSSSEEIYQK 272
Query: 411 L 409
L
Sbjct: 273 L 273
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,494,670
Number of Sequences: 5004
Number of extensions: 78033
Number of successful extensions: 242
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 242
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 387388442
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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