Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP05_T7_P06
(795 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein ( Dros... 97 2e-20
AY071124-1|AAL48746.1| 420|Drosophila melanogaster RE17165p pro... 33 0.45
AE014296-850|AAF47902.2| 420|Drosophila melanogaster CG15021-PA... 33 0.45
AY069683-1|AAL39828.1| 993|Drosophila melanogaster LD45449p pro... 33 0.59
AE014298-2035|AAF48374.1| 993|Drosophila melanogaster CG9411-PA... 33 0.59
L08845-1|AAB08527.1| 2412|Drosophila melanogaster disabled protein. 32 0.79
AY122256-1|AAM52768.1| 1153|Drosophila melanogaster SD07343p pro... 32 0.79
AF475087-1|AAL78679.1| 1985|Drosophila melanogaster transcriptio... 32 0.79
AF217844-1|AAF34752.1| 1966|Drosophila melanogaster GRUNGE protein. 32 0.79
AE014297-4154|AAF56730.2| 445|Drosophila melanogaster CG31058-P... 32 0.79
AE014296-2787|AAF49424.2| 2224|Drosophila melanogaster CG9695-PA... 32 0.79
AE014296-1461|AAN12008.1| 1966|Drosophila melanogaster CG6964-PA... 32 0.79
AE014296-1460|AAS65054.1| 1985|Drosophila melanogaster CG6964-PD... 32 0.79
AE014296-1459|AAF50413.2| 1985|Drosophila melanogaster CG6964-PB... 32 0.79
AE014296-1458|AAO41268.1| 1988|Drosophila melanogaster CG6964-PC... 32 0.79
AY061358-1|AAL28906.1| 319|Drosophila melanogaster LD28544p pro... 31 1.4
AE013599-3837|AAF47180.1| 319|Drosophila melanogaster CG3362-PA... 31 1.4
BT016143-1|AAV37028.1| 1240|Drosophila melanogaster AT25839p pro... 31 1.8
AY118822-1|AAM50682.1| 734|Drosophila melanogaster GH25986p pro... 31 1.8
AY051540-1|AAK92964.1| 777|Drosophila melanogaster GH19061p pro... 31 1.8
AE013599-727|AAF59033.1| 1240|Drosophila melanogaster CG8266-PA,... 31 1.8
AE013599-726|AAM71085.1| 1241|Drosophila melanogaster CG8266-PB,... 31 1.8
U42403-1|AAB02355.1| 1180|Drosophila melanogaster stripe a prote... 31 2.4
U42402-1|AAB02354.1| 906|Drosophila melanogaster stripe b prote... 31 2.4
BT015207-1|AAT94436.1| 542|Drosophila melanogaster RE58041p pro... 31 2.4
AE014297-2438|AAN13756.1| 906|Drosophila melanogaster CG7847-PB... 31 2.4
AE014297-2437|AAF55492.1| 1186|Drosophila melanogaster CG7847-PA... 31 2.4
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 30 3.2
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 30 3.2
X62420-1|CAA44286.1| 2515|Drosophila melanogaster tudor protein ... 30 4.2
BT023682-1|AAY85082.1| 142|Drosophila melanogaster IP04259p pro... 30 4.2
AE014297-3654|AAF56354.1| 142|Drosophila melanogaster CG13641-P... 30 4.2
AE013599-3155|AAF46693.1| 2515|Drosophila melanogaster CG9450-PA... 30 4.2
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 29 5.5
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 29 5.5
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 29 5.5
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 29 5.5
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 29 5.5
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 29 5.5
AE014298-2794|AAF48911.1| 668|Drosophila melanogaster CG14190-P... 29 5.5
BT029081-1|ABJ17014.1| 339|Drosophila melanogaster IP10546p pro... 29 7.3
AY166752-1|AAN85714.1| 1400|Drosophila melanogaster loechrig iso... 29 7.3
AY070541-1|AAL48012.1| 1400|Drosophila melanogaster LD22662p pro... 29 7.3
AE014297-2948|AAF55864.2| 1400|Drosophila melanogaster CG17299-P... 29 7.3
AE014296-2627|AAF49545.1| 339|Drosophila melanogaster CG13075-P... 29 7.3
M27431-1|AAA28868.1| 1896|Drosophila melanogaster protein ( D.me... 29 9.7
M19537-1|AAA28827.1| 408|Drosophila melanogaster RNA polymerase... 29 9.7
AY122247-1|AAM52759.1| 896|Drosophila melanogaster SD04548p pro... 29 9.7
AY089555-1|AAL90293.1| 1429|Drosophila melanogaster LD43558p pro... 29 9.7
AY089425-1|AAL90163.1| 313|Drosophila melanogaster AT24801p pro... 29 9.7
AE014298-2404|AAF48609.1| 511|Drosophila melanogaster CG9968-PB... 29 9.7
AE014298-1637|AAF48057.1| 1887|Drosophila melanogaster CG1554-PA... 29 9.7
AE014298-905|AAF46171.2| 3166|Drosophila melanogaster CG3950-PA ... 29 9.7
AE014297-2941|AAF55858.2| 896|Drosophila melanogaster CG5798-PA... 29 9.7
AE014296-3341|AAF51581.1| 900|Drosophila melanogaster CG5528-PA... 29 9.7
>X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type II retrotransposable
element R2Dm. ).
Length = 1057
Score = 97.5 bits (232), Expect = 2e-20
Identities = 57/153 (37%), Positives = 83/153 (54%), Gaps = 1/153 (0%)
Frame = -1
Query: 792 VPVHLKAEMFNAWMARGEYPEIXRQCRTVFVPKVERXRWTRGNIDRSRSRRFPL-RHFHS 616
VP + + N + G P R RTVF+PK + R R S L R ++
Sbjct: 373 VPSGIMLRIMNLILWCGNLPHSIRLARTVFIPKTVTAK--RPQDFRPISVPSVLVRQLNA 430
Query: 615 ILARRLLASCPPDARQRGFICADGTLENSAVLDAVLGDSRKKLRECHVAVLDFAKAFDTV 436
ILA RL +S D RQRGF+ DG +N+ ++D VL S K R C++A LD +KAFD++
Sbjct: 431 ILATRLNSSINWDPRQRGFLPTDGCADNATIVDLVLRHSHKHFRSCYIANLDVSKAFDSL 490
Query: 435 SHEALVELLRLRGMPEQFCGYIAHLYDTASTTL 337
SH ++ + LR G P+ F Y+ + Y+ T+L
Sbjct: 491 SHASIYDTLRAYGAPKGFVDYVQNTYEGGGTSL 523
Score = 46.4 bits (105), Expect = 5e-05
Identities = 27/78 (34%), Positives = 40/78 (51%)
Frame = -2
Query: 293 GFVQGDPLSPILFNVVMDPILASLPERVGYRLEMEXXXXXXXXXXXXXXAGSKVGMQESI 114
G QGDPLSPILFN+VMD +L +LP +G ++ A +++G+Q +
Sbjct: 538 GVKQGDPLSPILFNLVMDRLLRTLPSEIGAKVGNAITNAAAFADDLVLFAETRMGLQVLL 597
Query: 113 SAVDCVGRQMGLRLNCRK 60
+GL+LN K
Sbjct: 598 DKTLDFLSIVGLKLNADK 615
>AY071124-1|AAL48746.1| 420|Drosophila melanogaster RE17165p
protein.
Length = 420
Score = 33.1 bits (72), Expect = 0.45
Identities = 22/70 (31%), Positives = 27/70 (38%), Gaps = 1/70 (1%)
Frame = +2
Query: 98 HSPQQRWTPASLP-STPQAGLGRQHRPERTRVPSPTYTRPSPAGKPGWGPSPR*RVSATE 274
+ P Q PA P S P G ++ P P PT +RP P P P P
Sbjct: 167 YGPPQPQPPAPQPPSPPSPQPGPEYLPPDQPKPRPTPSRPQPPPPPPPRPQPTPGYGPPP 226
Query: 275 GPLXRTPRPT 304
P P+PT
Sbjct: 227 PPPPPKPQPT 236
Score = 31.9 bits (69), Expect = 1.0
Identities = 27/88 (30%), Positives = 34/88 (38%), Gaps = 3/88 (3%)
Frame = +2
Query: 53 PRFSCNSGVGPSAYRHSPQQRWTPASLPSTPQAGLGRQH---RPERTRVPSPTYTRPSPA 223
PR G GP P+ + TP P TP G G +P R + P P RP P
Sbjct: 214 PRPQPTPGYGPPPPPPPPKPQPTPGYGPPTPPPGPGPAQPAPQPPRPQPPRPQPPRPQP- 272
Query: 224 GKPGWGPSPR*RVSATEGPLXRTPRPTF 307
G P V+ T+ P P P +
Sbjct: 273 GSEYLPPPGENEVTPTQ-PQPTAPVPEY 299
Score = 29.9 bits (64), Expect = 4.2
Identities = 21/68 (30%), Positives = 25/68 (36%), Gaps = 2/68 (2%)
Frame = +2
Query: 104 PQQRWTPASLPSTPQAGLGRQHRPERT--RVPSPTYTRPSPAGKPGWGPSPR*RVSATEG 277
P + P PS PQ RP+ T P P P P PG+GP
Sbjct: 193 PPDQPKPRPTPSRPQPPPPPPPRPQPTPGYGPPPPPPPPKPQPTPGYGPPTPPPGPGPAQ 252
Query: 278 PLXRTPRP 301
P + PRP
Sbjct: 253 PAPQPPRP 260
>AE014296-850|AAF47902.2| 420|Drosophila melanogaster CG15021-PA
protein.
Length = 420
Score = 33.1 bits (72), Expect = 0.45
Identities = 22/70 (31%), Positives = 27/70 (38%), Gaps = 1/70 (1%)
Frame = +2
Query: 98 HSPQQRWTPASLP-STPQAGLGRQHRPERTRVPSPTYTRPSPAGKPGWGPSPR*RVSATE 274
+ P Q PA P S P G ++ P P PT +RP P P P P
Sbjct: 167 YGPPQPQPPAPQPPSPPSPQPGPEYLPPDQPKPRPTPSRPQPPPPPPPRPQPTPGYGPPP 226
Query: 275 GPLXRTPRPT 304
P P+PT
Sbjct: 227 PPPPPKPQPT 236
Score = 31.9 bits (69), Expect = 1.0
Identities = 27/88 (30%), Positives = 34/88 (38%), Gaps = 3/88 (3%)
Frame = +2
Query: 53 PRFSCNSGVGPSAYRHSPQQRWTPASLPSTPQAGLGRQH---RPERTRVPSPTYTRPSPA 223
PR G GP P+ + TP P TP G G +P R + P P RP P
Sbjct: 214 PRPQPTPGYGPPPPPPPPKPQPTPGYGPPTPPPGPGPAQPAPQPPRPQPPRPQPPRPQP- 272
Query: 224 GKPGWGPSPR*RVSATEGPLXRTPRPTF 307
G P V+ T+ P P P +
Sbjct: 273 GSEYLPPPGENEVTPTQ-PQPTAPVPEY 299
Score = 29.9 bits (64), Expect = 4.2
Identities = 21/68 (30%), Positives = 25/68 (36%), Gaps = 2/68 (2%)
Frame = +2
Query: 104 PQQRWTPASLPSTPQAGLGRQHRPERT--RVPSPTYTRPSPAGKPGWGPSPR*RVSATEG 277
P + P PS PQ RP+ T P P P P PG+GP
Sbjct: 193 PPDQPKPRPTPSRPQPPPPPPPRPQPTPGYGPPPPPPPPKPQPTPGYGPPTPPPGPGPAQ 252
Query: 278 PLXRTPRP 301
P + PRP
Sbjct: 253 PAPQPPRP 260
>AY069683-1|AAL39828.1| 993|Drosophila melanogaster LD45449p
protein.
Length = 993
Score = 32.7 bits (71), Expect = 0.59
Identities = 19/57 (33%), Positives = 24/57 (42%)
Frame = +2
Query: 80 GPSAYRHSPQQRWTPASLPSTPQAGLGRQHRPERTRVPSPTYTRPSPAGKPGWGPSP 250
GP +H P Q++ P PQ G Q P+P Y P P P +GP P
Sbjct: 115 GPPHIQHKPAQQYGPPPPKPAPQYGPPPQ--------PAPQYGPPPPKPAPQYGPPP 163
>AE014298-2035|AAF48374.1| 993|Drosophila melanogaster CG9411-PA
protein.
Length = 993
Score = 32.7 bits (71), Expect = 0.59
Identities = 19/57 (33%), Positives = 24/57 (42%)
Frame = +2
Query: 80 GPSAYRHSPQQRWTPASLPSTPQAGLGRQHRPERTRVPSPTYTRPSPAGKPGWGPSP 250
GP +H P Q++ P PQ G Q P+P Y P P P +GP P
Sbjct: 115 GPPHIQHKPAQQYGPPPPKPAPQYGPPPQ--------PAPQYGPPPPKPAPQYGPPP 163
>L08845-1|AAB08527.1| 2412|Drosophila melanogaster disabled protein.
Length = 2412
Score = 32.3 bits (70), Expect = 0.79
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +2
Query: 107 QQRWTPASLPSTPQAGLGRQHRPERTRVPSPTYTRPSPAGKPGWGPSP 250
+ R +PA+ + P G H P + S T P P KPG GPSP
Sbjct: 1400 RDRVSPATSSAAPSRGAPGLHTPSQFNDVS---TSPIPLQKPGMGPSP 1444
>AY122256-1|AAM52768.1| 1153|Drosophila melanogaster SD07343p
protein.
Length = 1153
Score = 32.3 bits (70), Expect = 0.79
Identities = 22/57 (38%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Frame = +2
Query: 83 PSAYRHSPQQ-RWTPASLPSTPQAGLGRQHRPERTRVPSPTYTRPSPAGKPGWGPSP 250
P H PQ R P S PST AG P + P T P P G G GP P
Sbjct: 318 PPRSMHDPQSSREPPTSQPSTTMAGSSGPGGPPPQQSPHAHRTSPLP-GLAGSGPPP 373
>AF475087-1|AAL78679.1| 1985|Drosophila melanogaster transcriptional
corepressor Atro protein.
Length = 1985
Score = 32.3 bits (70), Expect = 0.79
Identities = 22/57 (38%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Frame = +2
Query: 83 PSAYRHSPQQ-RWTPASLPSTPQAGLGRQHRPERTRVPSPTYTRPSPAGKPGWGPSP 250
P H PQ R P S PST AG P + P T P P G G GP P
Sbjct: 1150 PPRSMHDPQSSREPPTSQPSTTMAGSSGPGGPPPQQSPHAHRTSPLP-GLAGSGPPP 1205
>AF217844-1|AAF34752.1| 1966|Drosophila melanogaster GRUNGE protein.
Length = 1966
Score = 32.3 bits (70), Expect = 0.79
Identities = 22/57 (38%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Frame = +2
Query: 83 PSAYRHSPQQ-RWTPASLPSTPQAGLGRQHRPERTRVPSPTYTRPSPAGKPGWGPSP 250
P H PQ R P S PST AG P + P T P P G G GP P
Sbjct: 1150 PPRSMHDPQSSREPPTSQPSTTMAGSSGPGGPPPQQSPHAHRTSPLP-GLAGSGPPP 1205
>AE014297-4154|AAF56730.2| 445|Drosophila melanogaster CG31058-PA
protein.
Length = 445
Score = 32.3 bits (70), Expect = 0.79
Identities = 18/46 (39%), Positives = 21/46 (45%)
Frame = +2
Query: 116 WTPASLPSTPQAGLGRQHRPERTRVPSPTYTRPSPAGKPGWGPSPR 253
W PA P P G + TR P PT+ RP P G+P P R
Sbjct: 294 WNPAGAPGMPP---GARPPQNMTRPPPPTFARP-PPGQPLQAPFNR 335
>AE014296-2787|AAF49424.2| 2224|Drosophila melanogaster CG9695-PA
protein.
Length = 2224
Score = 32.3 bits (70), Expect = 0.79
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +2
Query: 107 QQRWTPASLPSTPQAGLGRQHRPERTRVPSPTYTRPSPAGKPGWGPSP 250
+ R +PA+ + P G H P + S T P P KPG GPSP
Sbjct: 1340 RDRVSPATSSAAPSRGAPGLHTPSQFNDVS---TSPIPLQKPGMGPSP 1384
>AE014296-1461|AAN12008.1| 1966|Drosophila melanogaster CG6964-PA,
isoform A protein.
Length = 1966
Score = 32.3 bits (70), Expect = 0.79
Identities = 22/57 (38%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Frame = +2
Query: 83 PSAYRHSPQQ-RWTPASLPSTPQAGLGRQHRPERTRVPSPTYTRPSPAGKPGWGPSP 250
P H PQ R P S PST AG P + P T P P G G GP P
Sbjct: 1150 PPRSMHDPQSSREPPTSQPSTTMAGSSGPGGPPPQQSPHAHRTSPLP-GLAGSGPPP 1205
>AE014296-1460|AAS65054.1| 1985|Drosophila melanogaster CG6964-PD,
isoform D protein.
Length = 1985
Score = 32.3 bits (70), Expect = 0.79
Identities = 22/57 (38%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Frame = +2
Query: 83 PSAYRHSPQQ-RWTPASLPSTPQAGLGRQHRPERTRVPSPTYTRPSPAGKPGWGPSP 250
P H PQ R P S PST AG P + P T P P G G GP P
Sbjct: 1150 PPRSMHDPQSSREPPTSQPSTTMAGSSGPGGPPPQQSPHAHRTSPLP-GLAGSGPPP 1205
>AE014296-1459|AAF50413.2| 1985|Drosophila melanogaster CG6964-PB,
isoform B protein.
Length = 1985
Score = 32.3 bits (70), Expect = 0.79
Identities = 22/57 (38%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Frame = +2
Query: 83 PSAYRHSPQQ-RWTPASLPSTPQAGLGRQHRPERTRVPSPTYTRPSPAGKPGWGPSP 250
P H PQ R P S PST AG P + P T P P G G GP P
Sbjct: 1150 PPRSMHDPQSSREPPTSQPSTTMAGSSGPGGPPPQQSPHAHRTSPLP-GLAGSGPPP 1205
>AE014296-1458|AAO41268.1| 1988|Drosophila melanogaster CG6964-PC,
isoform C protein.
Length = 1988
Score = 32.3 bits (70), Expect = 0.79
Identities = 22/57 (38%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Frame = +2
Query: 83 PSAYRHSPQQ-RWTPASLPSTPQAGLGRQHRPERTRVPSPTYTRPSPAGKPGWGPSP 250
P H PQ R P S PST AG P + P T P P G G GP P
Sbjct: 1150 PPRSMHDPQSSREPPTSQPSTTMAGSSGPGGPPPQQSPHAHRTSPLP-GLAGSGPPP 1205
>AY061358-1|AAL28906.1| 319|Drosophila melanogaster LD28544p
protein.
Length = 319
Score = 31.5 bits (68), Expect = 1.4
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +1
Query: 697 RYKDGSALPXNFGVFASCHPCIEHFRLQVHR 789
R +DG A+P +FG+F +C E+F+ + +
Sbjct: 64 RTEDGGAVPSSFGIFNACQSLPENFKAETDK 94
>AE013599-3837|AAF47180.1| 319|Drosophila melanogaster CG3362-PA
protein.
Length = 319
Score = 31.5 bits (68), Expect = 1.4
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +1
Query: 697 RYKDGSALPXNFGVFASCHPCIEHFRLQVHR 789
R +DG A+P +FG+F +C E+F+ + +
Sbjct: 64 RTEDGGAVPSSFGIFNACQSLPENFKAETDK 94
>BT016143-1|AAV37028.1| 1240|Drosophila melanogaster AT25839p protein.
Length = 1240
Score = 31.1 bits (67), Expect = 1.8
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 6/72 (8%)
Frame = +2
Query: 32 HPVS*TEPRFSCNSGVGPSAYRHS------PQQRWTPASLPSTPQAGLGRQHRPERTRVP 193
HP+ +P + N V PS Y+H+ P + PA+ + PQ Q + + P
Sbjct: 1030 HPLFPVDPNQNQNGYVDPSQYQHAAPPGGVPNTYYNPAAFNNNPQQQQQHQQSYLQPQQP 1089
Query: 194 SPTYTRPSPAGK 229
+P +P+ G+
Sbjct: 1090 APGIQQPNWQGQ 1101
>AY118822-1|AAM50682.1| 734|Drosophila melanogaster GH25986p
protein.
Length = 734
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +2
Query: 83 PSAYRHSPQQRWTPASLPSTPQAGLGRQHRPERTRVPSPTY--TRPSPAGKPGWGPSPR 253
P+ + H+P+++ P L A L + PE + P+P +PS GKP +P+
Sbjct: 175 PTFWPHTPEEQM-PGPLDPEAAAALHHEEEPEPPKKPAPEKLPDKPSGEGKPPAAAAPK 232
>AY051540-1|AAK92964.1| 777|Drosophila melanogaster GH19061p
protein.
Length = 777
Score = 31.1 bits (67), Expect = 1.8
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 6/72 (8%)
Frame = +2
Query: 32 HPVS*TEPRFSCNSGVGPSAYRHS------PQQRWTPASLPSTPQAGLGRQHRPERTRVP 193
HP+ +P + N V PS Y+H+ P + PA+ + PQ Q + + P
Sbjct: 567 HPLFPVDPNQNQNGYVDPSQYQHAAPLGGVPNTYYNPAAFNNNPQQQQQHQQSYLQPQQP 626
Query: 194 SPTYTRPSPAGK 229
+P +P+ G+
Sbjct: 627 APGIQQPNWQGQ 638
>AE013599-727|AAF59033.1| 1240|Drosophila melanogaster CG8266-PA,
isoform A protein.
Length = 1240
Score = 31.1 bits (67), Expect = 1.8
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 6/72 (8%)
Frame = +2
Query: 32 HPVS*TEPRFSCNSGVGPSAYRHS------PQQRWTPASLPSTPQAGLGRQHRPERTRVP 193
HP+ +P + N V PS Y+H+ P + PA+ + PQ Q + + P
Sbjct: 1030 HPLFPVDPNQNQNGYVDPSQYQHAAPLGGVPNTYYNPAAFNNNPQQQQQHQQSYLQPQQP 1089
Query: 194 SPTYTRPSPAGK 229
+P +P+ G+
Sbjct: 1090 APGIQQPNWQGQ 1101
>AE013599-726|AAM71085.1| 1241|Drosophila melanogaster CG8266-PB,
isoform B protein.
Length = 1241
Score = 31.1 bits (67), Expect = 1.8
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 6/72 (8%)
Frame = +2
Query: 32 HPVS*TEPRFSCNSGVGPSAYRHS------PQQRWTPASLPSTPQAGLGRQHRPERTRVP 193
HP+ +P + N V PS Y+H+ P + PA+ + PQ Q + + P
Sbjct: 1031 HPLFPVDPNQNQNGYVDPSQYQHAAPLGGVPNTYYNPAAFNNNPQQQQQHQQSYLQPQQP 1090
Query: 194 SPTYTRPSPAGK 229
+P +P+ G+
Sbjct: 1091 APGIQQPNWQGQ 1102
>U42403-1|AAB02355.1| 1180|Drosophila melanogaster stripe a protein
protein.
Length = 1180
Score = 30.7 bits (66), Expect = 2.4
Identities = 20/55 (36%), Positives = 27/55 (49%)
Frame = +2
Query: 398 PLNLSNSTSAS*DTVSNALAKSSTAT*HSRSFFLLSPSTASSTAEFSSVPSAQIN 562
P S T SN+L SSTA+ S S LL +TAS+ A ++ +A N
Sbjct: 332 PAQFGGSHHGGASTSSNSLNSSSTASSSSTSSSLLHYTTASAAAAAAAAAAASAN 386
>U42402-1|AAB02354.1| 906|Drosophila melanogaster stripe b protein
protein.
Length = 906
Score = 30.7 bits (66), Expect = 2.4
Identities = 20/55 (36%), Positives = 27/55 (49%)
Frame = +2
Query: 398 PLNLSNSTSAS*DTVSNALAKSSTAT*HSRSFFLLSPSTASSTAEFSSVPSAQIN 562
P S T SN+L SSTA+ S S LL +TAS+ A ++ +A N
Sbjct: 58 PAQFGGSHHGGASTSSNSLNSSSTASSSSTSSSLLHYTTASAAAAAAAAAAASAN 112
>BT015207-1|AAT94436.1| 542|Drosophila melanogaster RE58041p
protein.
Length = 542
Score = 30.7 bits (66), Expect = 2.4
Identities = 20/55 (36%), Positives = 27/55 (49%)
Frame = +2
Query: 398 PLNLSNSTSAS*DTVSNALAKSSTAT*HSRSFFLLSPSTASSTAEFSSVPSAQIN 562
P S T SN+L SSTA+ S S LL +TAS+ A ++ +A N
Sbjct: 58 PAQFGGSHHGGASTSSNSLNSSSTASSSSTSSSLLHYTTASAAAAAAAAAAASAN 112
>AE014297-2438|AAN13756.1| 906|Drosophila melanogaster CG7847-PB,
isoform B protein.
Length = 906
Score = 30.7 bits (66), Expect = 2.4
Identities = 20/55 (36%), Positives = 27/55 (49%)
Frame = +2
Query: 398 PLNLSNSTSAS*DTVSNALAKSSTAT*HSRSFFLLSPSTASSTAEFSSVPSAQIN 562
P S T SN+L SSTA+ S S LL +TAS+ A ++ +A N
Sbjct: 58 PAQFGGSHHGGASTSSNSLNSSSTASSSSTSSSLLHYTTASAAAAAAAAAAASAN 112
>AE014297-2437|AAF55492.1| 1186|Drosophila melanogaster CG7847-PA,
isoform A protein.
Length = 1186
Score = 30.7 bits (66), Expect = 2.4
Identities = 20/55 (36%), Positives = 27/55 (49%)
Frame = +2
Query: 398 PLNLSNSTSAS*DTVSNALAKSSTAT*HSRSFFLLSPSTASSTAEFSSVPSAQIN 562
P S T SN+L SSTA+ S S LL +TAS+ A ++ +A N
Sbjct: 338 PAQFGGSHHGGASTSSNSLNSSSTASSSSTSSSLLHYTTASAAAAAAAAAAASAN 392
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 30.3 bits (65), Expect = 3.2
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = -1
Query: 570 QRGFICADGTLENSAVLDAVLGDSRKKLRECHVAVLDFAKAFDTVSHEALVELLRLRGMP 391
Q GF T+ + L + +S + + + LD AFDTV H+ L+ L++ G P
Sbjct: 573 QYGFRNGLNTILPTLKLRNYIKESIQSKQSVGLVTLDIEAAFDTVWHDGLLHKLKMIGTP 632
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 30.3 bits (65), Expect = 3.2
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = -1
Query: 570 QRGFICADGTLENSAVLDAVLGDSRKKLRECHVAVLDFAKAFDTVSHEALVELLRLRGMP 391
Q GF T+ + L + +S + + + LD AFDTV H+ L+ L++ G P
Sbjct: 521 QYGFRNGLNTILPTLKLRNYIKESIQSKQSVGLVTLDIEAAFDTVWHDGLLHKLKMIGTP 580
>X62420-1|CAA44286.1| 2515|Drosophila melanogaster tudor protein
protein.
Length = 2515
Score = 29.9 bits (64), Expect = 4.2
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = +2
Query: 62 SCNSGVGPSAYRHSPQQRWTPASLPSTPQAGLGRQHRPERTRVPSPTYTRPSPAGKP 232
S ++ P +H+ + R S P+ P + Q P + PSP P+P KP
Sbjct: 1527 SGSANASPKKKQHNDKDREPKKSKPAEPARTVAPQ--PVALKTPSPVPAEPAPVPKP 1581
>BT023682-1|AAY85082.1| 142|Drosophila melanogaster IP04259p
protein.
Length = 142
Score = 29.9 bits (64), Expect = 4.2
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +3
Query: 468 PPRDIPAASSCYPQAPRPVLRNSPAYXXXXXXXAVVH 578
PPR +PAA+ YP P +R SP Y A VH
Sbjct: 88 PPRPVPAANDYYP--PPWSVRPSPGYYSQPSHPASVH 122
>AE014297-3654|AAF56354.1| 142|Drosophila melanogaster CG13641-PA
protein.
Length = 142
Score = 29.9 bits (64), Expect = 4.2
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +3
Query: 468 PPRDIPAASSCYPQAPRPVLRNSPAYXXXXXXXAVVH 578
PPR +PAA+ YP P +R SP Y A VH
Sbjct: 88 PPRPVPAANDYYP--PPWSVRPSPGYYSQPSHPASVH 122
>AE013599-3155|AAF46693.1| 2515|Drosophila melanogaster CG9450-PA
protein.
Length = 2515
Score = 29.9 bits (64), Expect = 4.2
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = +2
Query: 62 SCNSGVGPSAYRHSPQQRWTPASLPSTPQAGLGRQHRPERTRVPSPTYTRPSPAGKP 232
S ++ P +H+ + R S P+ P + Q P + PSP P+P KP
Sbjct: 1527 SGSANASPKKKQHNDKDREPKKSKPAEPARTVAPQ--PVALKTPSPVPAEPAPVPKP 1581
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 29.5 bits (63), Expect = 5.5
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = -1
Query: 570 QRGFICADGTLENSAVLDAVLGDSRKKLRECHVAVLDFAKAFDTVSHEALV 418
Q GF GT + A + + ++ ++ C LD ++AFD V HE L+
Sbjct: 477 QFGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRVWHEGLL 527
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 29.5 bits (63), Expect = 5.5
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = -1
Query: 570 QRGFICADGTLENSAVLDAVLGDSRKKLRECHVAVLDFAKAFDTVSHEALV 418
Q GF GT + A + + ++ ++ C LD ++AFD V HE L+
Sbjct: 605 QFGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRVWHEGLL 655
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 29.5 bits (63), Expect = 5.5
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = -1
Query: 570 QRGFICADGTLENSAVLDAVLGDSRKKLRECHVAVLDFAKAFDTVSHEALV 418
Q GF GT + A + + ++ ++ C LD ++AFD V HE L+
Sbjct: 593 QFGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRVWHEGLL 643
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 29.5 bits (63), Expect = 5.5
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = -1
Query: 570 QRGFICADGTLENSAVLDAVLGDSRKKLRECHVAVLDFAKAFDTVSHEALV 418
Q GF GT + A + + ++ ++ C LD ++AFD V HE L+
Sbjct: 593 QFGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRVWHEGLL 643
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 29.5 bits (63), Expect = 5.5
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = -1
Query: 570 QRGFICADGTLENSAVLDAVLGDSRKKLRECHVAVLDFAKAFDTVSHEALV 418
Q GF GT + A + + ++ ++ C LD ++AFD V HE L+
Sbjct: 555 QFGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRVWHEGLL 605
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 29.5 bits (63), Expect = 5.5
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = -1
Query: 570 QRGFICADGTLENSAVLDAVLGDSRKKLRECHVAVLDFAKAFDTVSHEALV 418
Q GF GT + A + + ++ ++ C LD ++AFD V HE L+
Sbjct: 593 QFGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRVWHEGLL 643
>AE014298-2794|AAF48911.1| 668|Drosophila melanogaster CG14190-PA
protein.
Length = 668
Score = 29.5 bits (63), Expect = 5.5
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +2
Query: 122 PASLPSTPQAGLGRQHRPERTRVPSPTYTRPSPAGKPGWGPSPR*RVSATEGP 280
P P++ AG PE T P+P + P PA P P+P V+ T P
Sbjct: 549 PGDAPTSHPAG---DPAPESTPTPAPE-SNPDPAQTPTLAPTPAPPVAPTPAP 597
>BT029081-1|ABJ17014.1| 339|Drosophila melanogaster IP10546p
protein.
Length = 339
Score = 29.1 bits (62), Expect = 7.3
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +2
Query: 377 PQNCSGMPLNL-SNSTSAS*DTVSNALAKSSTAT*HSRSFFLLSPSTASSTAEFSSVPSA 553
P +CS S+S+S + T S++ + S+TA+ + S +P+TASS+A S+ S
Sbjct: 248 PTSCSDTTTQSPSDSSSTASSTESSSESSSTTASSTASSSTESTPTTASSSASSSTESST 307
Query: 554 Q 556
+
Sbjct: 308 E 308
>AY166752-1|AAN85714.1| 1400|Drosophila melanogaster loechrig
isoform I protein.
Length = 1400
Score = 29.1 bits (62), Expect = 7.3
Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +2
Query: 122 PASLPST--PQAGLGRQHRPERTRVPSPTYTRPSPAGKPGWGPSPR*RVSATEGPLXRTP 295
P +P+T P+A H E PS RPSP G P P+ + A E P+ TP
Sbjct: 285 PPPIPATILPKALKALLHTQEPVAPPS----RPSPVGPPSPAPTSS-VIVAKETPVPVTP 339
Query: 296 RP 301
P
Sbjct: 340 EP 341
>AY070541-1|AAL48012.1| 1400|Drosophila melanogaster LD22662p
protein.
Length = 1400
Score = 29.1 bits (62), Expect = 7.3
Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +2
Query: 122 PASLPST--PQAGLGRQHRPERTRVPSPTYTRPSPAGKPGWGPSPR*RVSATEGPLXRTP 295
P +P+T P+A H E PS RPSP G P P+ + A E P+ TP
Sbjct: 285 PPPIPATILPKALKALLHTQEPVAPPS----RPSPVGPPSPAPTSS-VIVAKETPVPVTP 339
Query: 296 RP 301
P
Sbjct: 340 EP 341
>AE014297-2948|AAF55864.2| 1400|Drosophila melanogaster CG17299-PF,
isoform F protein.
Length = 1400
Score = 29.1 bits (62), Expect = 7.3
Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +2
Query: 122 PASLPST--PQAGLGRQHRPERTRVPSPTYTRPSPAGKPGWGPSPR*RVSATEGPLXRTP 295
P +P+T P+A H E PS RPSP G P P+ + A E P+ TP
Sbjct: 285 PPPIPATILPKALKALLHTQEPVAPPS----RPSPVGPPSPAPTSS-VIVAKETPVPVTP 339
Query: 296 RP 301
P
Sbjct: 340 EP 341
>AE014296-2627|AAF49545.1| 339|Drosophila melanogaster CG13075-PA
protein.
Length = 339
Score = 29.1 bits (62), Expect = 7.3
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +2
Query: 377 PQNCSGMPLNL-SNSTSAS*DTVSNALAKSSTAT*HSRSFFLLSPSTASSTAEFSSVPSA 553
P +CS S+S+S + T S++ + S+TA+ + S +P+TASS+A S+ S
Sbjct: 248 PTSCSDTTTQSPSDSSSTASSTESSSESSSTTASSTASSSTESTPTTASSSASSSTESST 307
Query: 554 Q 556
+
Sbjct: 308 E 308
>M27431-1|AAA28868.1| 1896|Drosophila melanogaster protein (
D.melanogaster RpII215gene encoding RNA polymerase II,
largest subunit, completecds. ).
Length = 1896
Score = 28.7 bits (61), Expect = 9.7
Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 12/73 (16%)
Frame = +2
Query: 53 PRFSCNSGVGPSAYRHSPQQR-WTPASLPSTPQAGLGRQHRP-----ERTRVP----SPT 202
P C S PS SP TP+ P++P Q+ P +T V SPT
Sbjct: 1703 PTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPQYSPASPAYSQTGVKYSPTSPT 1762
Query: 203 YTRPSPA--GKPG 235
Y+ PSP+ G PG
Sbjct: 1763 YSPPSPSYDGSPG 1775
>M19537-1|AAA28827.1| 408|Drosophila melanogaster RNA polymerase II
largest subunit protein.
Length = 408
Score = 28.7 bits (61), Expect = 9.7
Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 12/73 (16%)
Frame = +2
Query: 53 PRFSCNSGVGPSAYRHSPQQR-WTPASLPSTPQAGLGRQHRP-----ERTRVP----SPT 202
P C S PS SP TP+ P++P Q+ P +T V SPT
Sbjct: 222 PTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPQYSPASPAYSQTGVKYSPTSPT 281
Query: 203 YTRPSPA--GKPG 235
Y+ PSP+ G PG
Sbjct: 282 YSPPSPSYDGSPG 294
>AY122247-1|AAM52759.1| 896|Drosophila melanogaster SD04548p
protein.
Length = 896
Score = 28.7 bits (61), Expect = 9.7
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 143 PQAGLGRQHRPERTRVPSPTYTRPSPAGKP 232
P+ R ++P TRV +RPSP KP
Sbjct: 320 PRPDFNRANKPAATRVNEQGISRPSPPAKP 349
>AY089555-1|AAL90293.1| 1429|Drosophila melanogaster LD43558p protein.
Length = 1429
Score = 28.7 bits (61), Expect = 9.7
Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 12/73 (16%)
Frame = +2
Query: 53 PRFSCNSGVGPSAYRHSPQQR-WTPASLPSTPQAGLGRQHRP-----ERTRVP----SPT 202
P C S PS SP TP+ P++P Q+ P +T V SPT
Sbjct: 1243 PTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPQYSPASPAYSQTGVKYSPTSPT 1302
Query: 203 YTRPSPA--GKPG 235
Y+ PSP+ G PG
Sbjct: 1303 YSPPSPSYDGSPG 1315
>AY089425-1|AAL90163.1| 313|Drosophila melanogaster AT24801p
protein.
Length = 313
Score = 28.7 bits (61), Expect = 9.7
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3
Query: 274 LCRRYSSTW*WTPSWL 227
+CR S TW WT SW+
Sbjct: 260 ICRSLSRTWHWTSSWI 275
>AE014298-2404|AAF48609.1| 511|Drosophila melanogaster CG9968-PB,
isoform B protein.
Length = 511
Score = 28.7 bits (61), Expect = 9.7
Identities = 24/87 (27%), Positives = 33/87 (37%), Gaps = 7/87 (8%)
Frame = +2
Query: 11 FFSSCGGHPVS*TE----PRFSCNSGVGPSAYRHSPQ---QRWTPASLPSTPQAGLGRQH 169
F S HP + T PR +G P ++SP + P S PS+ Q
Sbjct: 4 FGSGMPSHPPTSTNHHEPPRAPFGAGWVPPMQQNSPYPPPSQPHPHSQPSSQMHPQQHQQ 63
Query: 170 RPERTRVPSPTYTRPSPAGKPGWGPSP 250
P P P + P P+ P + P P
Sbjct: 64 YPGGAPAPYPPMSAPYPSAAPSYPPYP 90
>AE014298-1637|AAF48057.1| 1887|Drosophila melanogaster CG1554-PA
protein.
Length = 1887
Score = 28.7 bits (61), Expect = 9.7
Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 12/73 (16%)
Frame = +2
Query: 53 PRFSCNSGVGPSAYRHSPQQR-WTPASLPSTPQAGLGRQHRP-----ERTRVP----SPT 202
P C S PS SP TP+ P++P Q+ P +T V SPT
Sbjct: 1701 PTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPQYSPASPAYSQTGVKYSPTSPT 1760
Query: 203 YTRPSPA--GKPG 235
Y+ PSP+ G PG
Sbjct: 1761 YSPPSPSYDGSPG 1773
>AE014298-905|AAF46171.2| 3166|Drosophila melanogaster CG3950-PA
protein.
Length = 3166
Score = 28.7 bits (61), Expect = 9.7
Identities = 19/71 (26%), Positives = 27/71 (38%)
Frame = +2
Query: 92 YRHSPQQRWTPASLPSTPQAGLGRQHRPERTRVPSPTYTRPSPAGKPGWGPSPR*RVSAT 271
Y P+ P P P+ + E T + SP+ P W PSP RV +
Sbjct: 1489 YPKEPETSQYPKESPRNPKEDAETININEETTIVITKEGSKSPS--PRWSPSPERRVPKS 1546
Query: 272 EGPLXRTPRPT 304
+ P T P+
Sbjct: 1547 QQPPSPTASPS 1557
>AE014297-2941|AAF55858.2| 896|Drosophila melanogaster CG5798-PA
protein.
Length = 896
Score = 28.7 bits (61), Expect = 9.7
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 143 PQAGLGRQHRPERTRVPSPTYTRPSPAGKP 232
P+ R ++P TRV +RPSP KP
Sbjct: 320 PRPDFNRANKPAATRVNEQGISRPSPPAKP 349
>AE014296-3341|AAF51581.1| 900|Drosophila melanogaster CG5528-PA
protein.
Length = 900
Score = 28.7 bits (61), Expect = 9.7
Identities = 22/66 (33%), Positives = 29/66 (43%)
Frame = -1
Query: 534 NSAVLDAVLGDSRKKLRECHVAVLDFAKAFDTVSHEALVELLRLRGMPEQFCGYIAHLYD 355
NSAV A LGD K L C+ A+ T+ ++E L L G P I +D
Sbjct: 370 NSAVAFAHLGDKLKFLSLCYTAI---PMVSSTIFKNTVLEGLDLSGNPYLSYNIIDDAFD 426
Query: 354 TASTTL 337
+ TL
Sbjct: 427 GIANTL 432
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,862,272
Number of Sequences: 53049
Number of extensions: 1090957
Number of successful extensions: 4165
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 3356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4097
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3695805360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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