Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP05_T7_P06
(795 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical pr... 38 0.011
AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse trans... 36 0.033
AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical ... 36 0.033
AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical ... 33 0.18
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 33 0.24
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 32 0.41
U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog (hedg... 32 0.41
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 32 0.41
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 31 0.95
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 31 0.95
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 31 0.95
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 31 0.95
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 31 0.95
AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical ... 31 1.3
AC024790-3|AAF60637.1| 446|Caenorhabditis elegans Hypothetical ... 31 1.3
Z74033-3|CAA98477.1| 407|Caenorhabditis elegans Hypothetical pr... 30 2.2
U23449-1|AAC24298.3| 488|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 29 2.9
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 29 2.9
U58739-2|AAB00608.1| 391|Caenorhabditis elegans Hypothetical pr... 29 3.8
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 29 3.8
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 3.8
AC024778-1|AAF60567.1| 393|Caenorhabditis elegans Collagen prot... 29 3.8
Z81486-11|CAB03994.1| 1150|Caenorhabditis elegans Hypothetical p... 29 5.1
Z78015-6|CAB01437.1| 1150|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z74028-3|CAA98425.1| 1908|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z73425-5|CAA97787.1| 427|Caenorhabditis elegans Hypothetical pr... 29 5.1
AF016426-1|AAB65347.2| 254|Caenorhabditis elegans Hypothetical ... 29 5.1
AC006712-6|AAO21405.1| 765|Caenorhabditis elegans Temporarily a... 29 5.1
AC006712-5|AAK39326.2| 851|Caenorhabditis elegans Temporarily a... 29 5.1
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 28 6.7
AF026213-9|AAB71302.2| 615|Caenorhabditis elegans Protein kinas... 28 6.7
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 28 6.7
Z93398-9|CAN99698.1| 1497|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z92788-9|CAN99699.1| 1497|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 28 8.9
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 28 8.9
>U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical
protein F20B4.7 protein.
Length = 891
Score = 37.5 bits (83), Expect = 0.011
Identities = 25/88 (28%), Positives = 40/88 (45%)
Frame = -1
Query: 606 RRLLASCPPDARQRGFICADGTLENSAVLDAVLGDSRKKLRECHVAVLDFAKAFDTVSHE 427
RR L P Q GF + T+++ L +L R+ + +DF KAFDTV H+
Sbjct: 474 RRSLDEAQP-VEQAGFRRSFSTIDHIHSLQRLLEVGREYQIPLTLVFIDFKKAFDTVEHQ 532
Query: 426 ALVELLRLRGMPEQFCGYIAHLYDTAST 343
A+ + L +G + + Y +T
Sbjct: 533 AIWKSLDEQGADGAYIDLLKECYKNCTT 560
>AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse
transcriptase protein.
Length = 1066
Score = 35.9 bits (79), Expect = 0.033
Identities = 24/88 (27%), Positives = 40/88 (45%)
Frame = -1
Query: 606 RRLLASCPPDARQRGFICADGTLENSAVLDAVLGDSRKKLRECHVAVLDFAKAFDTVSHE 427
RR L P Q GF + T+++ L +L R+ + +DF KAFD+V H+
Sbjct: 645 RRSLDEAQP-VEQAGFRRSFSTIDHIHSLQRLLEVGREYQIPLTLVFIDFKKAFDSVEHQ 703
Query: 426 ALVELLRLRGMPEQFCGYIAHLYDTAST 343
A+ + L +G + + Y +T
Sbjct: 704 AIWKSLDEQGADGAYIDLLKECYKNCTT 731
>AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical
protein K10F12.5 protein.
Length = 805
Score = 35.9 bits (79), Expect = 0.033
Identities = 24/88 (27%), Positives = 40/88 (45%)
Frame = -1
Query: 606 RRLLASCPPDARQRGFICADGTLENSAVLDAVLGDSRKKLRECHVAVLDFAKAFDTVSHE 427
RR L P Q GF + T+++ L +L R+ + +DF KAFD+V H+
Sbjct: 384 RRSLDEAQP-VEQAGFRRSFSTIDHIHSLQRLLEVGREYQIPLTLVFIDFKKAFDSVEHQ 442
Query: 426 ALVELLRLRGMPEQFCGYIAHLYDTAST 343
A+ + L +G + + Y +T
Sbjct: 443 AIWKSLDEQGADGAYIDLLKECYKNCTT 470
>AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical
protein Y32G9A.9 protein.
Length = 417
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = -1
Query: 486 RECHVAVLDFAKAFDTVSHEALVELLRLRGMPEQFCGYIAHLYDTAST 343
R + +DF KAFD+V H+A+ + L +G E + + Y +T
Sbjct: 35 RSLTLVFIDFKKAFDSVEHQAIWKSLDEQGADEAYIDLLKECYKNCTT 82
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
protein F12F6.6 protein.
Length = 1126
Score = 33.1 bits (72), Expect = 0.24
Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Frame = +2
Query: 83 PSAYRHSPQQ--RWTPASLPSTPQAGLGRQHRPERTRVPSPTYTRPSPAGKPGWGPSP 250
PSA P Q + PA P PQ G P+ ++ PT RP G P G SP
Sbjct: 127 PSATPAGPLQAMQQAPAPTPGIPQMNQGAHLPPQPHQIHQPTPLRPQIPGFPQAGGSP 184
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 32.3 bits (70), Expect = 0.41
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Frame = +2
Query: 47 TEPRFSCNS-GVGPSAYRHSPQQ-RWTPASLPSTPQAGLGRQHRPERTRVPSPTYTRPSP 220
T P +S +S PS+ +SP R++P S +P + P + SPTY+ SP
Sbjct: 1650 TSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPT-SPTYSPTSP 1708
Query: 221 AGKPGWGPSPR*RVSATEGPLXRTPRPTFT 310
+ + G G SP + P P+++
Sbjct: 1709 SYESGGGYSPSSPKYSPSSPTYSPTSPSYS 1738
>U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 6 protein.
Length = 559
Score = 32.3 bits (70), Expect = 0.41
Identities = 27/87 (31%), Positives = 34/87 (39%), Gaps = 1/87 (1%)
Frame = +2
Query: 47 TEPRFSCNSGVGPSAYRHSPQQRWTPASLPSTPQAGLGRQHRP-ERTRVPSPTYTRPSPA 223
T PR + P A P TP+ P+TP+A P TR P P P +
Sbjct: 289 TTPRLTTARATTPLATTSRPT---TPS--PTTPRATTPLATTPLATTRAPLPPSPPPRTS 343
Query: 224 GKPGWGPSPR*RVSATEGPLXRTPRPT 304
+P R + T P TPRPT
Sbjct: 344 KRPVTQAPTTPRATTTRRPTTTTPRPT 370
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.elegans
RNA polymeraseII largest subunit (ama-1 IV) gene,
complete cds. ).
Length = 1859
Score = 32.3 bits (70), Expect = 0.41
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Frame = +2
Query: 47 TEPRFSCNS-GVGPSAYRHSPQQ-RWTPASLPSTPQAGLGRQHRPERTRVPSPTYTRPSP 220
T P +S +S PS+ +SP R++P S +P + P + SPTY+ SP
Sbjct: 1657 TSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPT-SPTYSPTSP 1715
Query: 221 AGKPGWGPSPR*RVSATEGPLXRTPRPTFT 310
+ + G G SP + P P+++
Sbjct: 1716 SYESGGGYSPSSPKYSPSSPTYSPTSPSYS 1745
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 31.1 bits (67), Expect = 0.95
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 592 SQQPPGQDGVKVSQGEST*SRSVDIPPGPPGSLHLRYKDG 711
S PPGQDG G+ + + PGPPG L+ ++G
Sbjct: 587 SPGPPGQDGFPGLPGQKGEPTQLTLRPGPPGYPGLKGENG 626
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 31.1 bits (67), Expect = 0.95
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 592 SQQPPGQDGVKVSQGEST*SRSVDIPPGPPGSLHLRYKDG 711
S PPGQDG G+ + + PGPPG L+ ++G
Sbjct: 586 SPGPPGQDGFPGLPGQKGEPTQLTLRPGPPGYPGLKGENG 625
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 31.1 bits (67), Expect = 0.95
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 592 SQQPPGQDGVKVSQGEST*SRSVDIPPGPPGSLHLRYKDG 711
S PPGQDG G+ + + PGPPG L+ ++G
Sbjct: 586 SPGPPGQDGFPGLPGQKGEPTQLTLRPGPPGYPGLKGENG 625
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 31.1 bits (67), Expect = 0.95
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 592 SQQPPGQDGVKVSQGEST*SRSVDIPPGPPGSLHLRYKDG 711
S PPGQDG G+ + + PGPPG L+ ++G
Sbjct: 587 SPGPPGQDGFPGLPGQKGEPTQLTLRPGPPGYPGLKGENG 626
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV)
collagen protein.
Length = 1795
Score = 31.1 bits (67), Expect = 0.95
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 592 SQQPPGQDGVKVSQGEST*SRSVDIPPGPPGSLHLRYKDG 711
S PPGQDG G+ + + PGPPG L+ ++G
Sbjct: 623 SPGPPGQDGFPGLPGQKGEPTQLTLRPGPPGYPGLKGENG 662
>AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical
protein C44B12.7 protein.
Length = 389
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -1
Query: 453 KAFDTVSHEALVELLRLRGMPEQFCGYIAHLYDTASTTLAVNNEM 319
KAFD V+H L++ L G+ FC + + + ++ VNN +
Sbjct: 2 KAFDQVNHSLLLQKLHDFGINPLFCNWFHDFLSSRTFSVKVNNHI 46
>AC024790-3|AAF60637.1| 446|Caenorhabditis elegans Hypothetical
protein Y47D7A.6 protein.
Length = 446
Score = 30.7 bits (66), Expect = 1.3
Identities = 25/80 (31%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Frame = +2
Query: 47 TEPRFSCNSGVGPSAYRHSPQQRWTPASLPSTPQAGLGRQHRPERTRVPSPTYTRPSP-A 223
T P + S Y +P TP+S +TP + P++ V SP PS A
Sbjct: 312 TTPSYLVQSHAASKKYPIAPTYETTPSSYDTTPSYSVPSYTAPKKYPVASP----PSDYA 367
Query: 224 GKPGW-GPSPR*RVSATEGP 280
KP + PSP S E P
Sbjct: 368 QKPSYSAPSPSGYTSNFEAP 387
>Z74033-3|CAA98477.1| 407|Caenorhabditis elegans Hypothetical
protein F38B7.3 protein.
Length = 407
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
Frame = +2
Query: 134 PSTPQAGLGRQHRPERTR---VPSPTYTRPSPAGKPGWGPSPR*RVSATEGP 280
P+ PQ G G Q ++ VP Y P +PG+ P P S GP
Sbjct: 142 PNAPQQGPGAQPPQQQNNGGYVPPTVYPSAPPPVQPGYNPRPASGQSYPSGP 193
>U23449-1|AAC24298.3| 488|Caenorhabditis elegans Hypothetical
protein K06A1.3 protein.
Length = 488
Score = 29.9 bits (64), Expect = 2.2
Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Frame = +2
Query: 56 RFSCNSGVGP--SAYRHSPQQRWTPASLPSTPQAGLGRQ-HRPERTRVPSPTYTRPSPAG 226
R SC V P S H P+ + +S+ + +GR+ R E P PT + P+
Sbjct: 245 RISCKISVCPTLSGTCHQPKCDASASSIDDASEP-IGRELARDELITTPMPTSSTEIPST 303
Query: 227 KPGWGPSPR*RVSATEGPLXRTPRPTFT 310
+ +ATE P T RPT T
Sbjct: 304 TTTSTTTTTSTTTATETPTTTTERPTTT 331
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical
protein W01F3.3 protein.
Length = 2175
Score = 29.5 bits (63), Expect = 2.9
Identities = 31/104 (29%), Positives = 42/104 (40%), Gaps = 4/104 (3%)
Frame = +2
Query: 5 FFFFSSCGGHPVS*TEPRFSCNS--GVGPSAYRHSPQQRW-TPASLPSTPQAG-LGRQHR 172
+FF+ C G+ + E C S GV S + P T + TP G L +
Sbjct: 566 YFFWGGCEGNQNN-FERVEDCESACGVQKSGVTNRPNTEIRTTQGIRITPNGGKLSWEET 624
Query: 173 PERTRVPSPTYTRPSPAGKPGWGPSPR*RVSATEGPLXRTPRPT 304
E PT T +P+ +P RVS P+ TPRPT
Sbjct: 625 EEDEEHAVPTTTPLAPS-------APTVRVSTQRAPVPTTPRPT 661
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -2
Query: 293 GFVQGDPLSPILFNVVMDPILASLPERV 210
G QG LSP+LF + ++ I + LPE+V
Sbjct: 76 GVPQGAVLSPLLFGIYVNDISSILPEKV 103
>U58739-2|AAB00608.1| 391|Caenorhabditis elegans Hypothetical
protein F28C10.4 protein.
Length = 391
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = -1
Query: 741 EYPEIXRQCRTVFVPKVERXR-WTRGNIDRSRSRRFPLRHFHSILA 607
E P I + C+T+ + K E+ + + NID ++SR F H++ +LA
Sbjct: 189 EMPRIAK-CQTIGLVKSEKQKNLIQTNIDYAKSRNFKNDHYNLVLA 233
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/66 (25%), Positives = 23/66 (34%), Gaps = 2/66 (3%)
Frame = +2
Query: 53 PRFSCNSGVGPSAYRHSPQQRWTP--ASLPSTPQAGLGRQHRPERTRVPSPTYTRPSPAG 226
P + ++G YR P P P PQA Q + R + G
Sbjct: 134 PHYPSSNGPSQQGYRPGPVTNGPPPQGQYPPPPQAPQNYQQMYHQQRAQQQQAGQQQAQG 193
Query: 227 KPGWGP 244
PG+GP
Sbjct: 194 PPGYGP 199
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.1 bits (62), Expect = 3.8
Identities = 26/75 (34%), Positives = 30/75 (40%), Gaps = 9/75 (12%)
Frame = +2
Query: 53 PRFSCNSGVGPSAYRH-SPQQRWTPASLPSTPQAGL-GRQHRPERTR------VPSPTYT 208
P+ G+GPS Y H SPQ R P P G+ G + P R P P
Sbjct: 1531 PQRGGGPGMGPSQYYHDSPQNRGPPMGGLPPPHGGMNGWRGGPPPPRGGSHCQGPPPLMG 1590
Query: 209 RPSP-AGKPGWGPSP 250
P P G P GP P
Sbjct: 1591 GPPPRLGMPPPGPPP 1605
>AC024778-1|AAF60567.1| 393|Caenorhabditis elegans Collagen protein
115 protein.
Length = 393
Score = 29.1 bits (62), Expect = 3.8
Identities = 18/40 (45%), Positives = 20/40 (50%)
Frame = +1
Query: 595 QQPPGQDGVKVSQGEST*SRSVDIPPGPPGSLHLRYKDGS 714
Q PPG DG + GE S + PPGPPG L GS
Sbjct: 258 QGPPGLDGETID-GEDG-SPGLPGPPGPPGPPGLHGSPGS 295
>Z81486-11|CAB03994.1| 1150|Caenorhabditis elegans Hypothetical
protein C53A5.2 protein.
Length = 1150
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 434 DTVSNALAKSSTAT*HSRSFFLLSPSTASSTAEF 535
D++ A+++ RSF L SPST+SS A F
Sbjct: 58 DSIKGAMSRGLVLKIVQRSFSLNSPSTSSSNASF 91
>Z78015-6|CAB01437.1| 1150|Caenorhabditis elegans Hypothetical
protein C53A5.2 protein.
Length = 1150
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 434 DTVSNALAKSSTAT*HSRSFFLLSPSTASSTAEF 535
D++ A+++ RSF L SPST+SS A F
Sbjct: 58 DSIKGAMSRGLVLKIVQRSFSLNSPSTSSSNASF 91
>Z74028-3|CAA98425.1| 1908|Caenorhabditis elegans Hypothetical protein
C14C10.5 protein.
Length = 1908
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = -1
Query: 498 RKKLRECHVAVLDFAKAFDTVSHEALVELLR-LRGMPEQFCGYIAHLYDTASTTLAVNNE 322
R+ +C + ++D+ +++ E + LRG+P GY LY+T+ST+ V
Sbjct: 916 RQMALDCTIGLIDWLLEHSPDDVKSIQEAISILRGLPMNR-GYTKELYNTSSTSYRVTKT 974
Query: 321 M 319
M
Sbjct: 975 M 975
>Z73425-5|CAA97787.1| 427|Caenorhabditis elegans Hypothetical
protein F12F6.9 protein.
Length = 427
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/44 (40%), Positives = 21/44 (47%)
Frame = +1
Query: 604 PGQDGVKVSQGEST*SRSVDIPPGPPGSLHLRYKDGSALPXNFG 735
PGQDG+ QGE V P GPPG + DG + FG
Sbjct: 149 PGQDGLDGEQGEEG---PVG-PSGPPGRRGRKGADGKSAMGGFG 188
>AF016426-1|AAB65347.2| 254|Caenorhabditis elegans Hypothetical
protein W07B8.3 protein.
Length = 254
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/51 (33%), Positives = 20/51 (39%)
Frame = +2
Query: 83 PSAYRHSPQQRWTPASLPSTPQAGLGRQHRPERTRVPSPTYTRPSPAGKPG 235
P YRH PQQ T A P G H P ++ T S +G G
Sbjct: 131 PDTYRHHPQQ-MTRAMSPPPMSTTTGSTHSPPLRQIGETVKTTYSHSGSYG 180
>AC006712-6|AAO21405.1| 765|Caenorhabditis elegans Temporarily
assigned gene nameprotein 332, isoform b protein.
Length = 765
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +2
Query: 101 SPQQRWTPASLPSTPQAGLGRQHRPERTRVPSPTYTRPSPAGK 229
S + W +S P G+G Q P +RVP+ + T S GK
Sbjct: 687 STSREWNQSSAPPPRMGGMGGQ--PPMSRVPASSSTSVSAIGK 727
>AC006712-5|AAK39326.2| 851|Caenorhabditis elegans Temporarily
assigned gene nameprotein 332, isoform a protein.
Length = 851
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +2
Query: 101 SPQQRWTPASLPSTPQAGLGRQHRPERTRVPSPTYTRPSPAGK 229
S + W +S P G+G Q P +RVP+ + T S GK
Sbjct: 687 STSREWNQSSAPPPRMGGMGGQ--PPMSRVPASSSTSVSAIGK 727
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = +2
Query: 128 SLPSTPQA--GLGRQHRPERTRVPSPTYTRPSPAGKPGWGPSP 250
S PS P++ G G P +P+ PS G P GPSP
Sbjct: 1384 SNPSVPESSTGGGPSPGPSPNEPSNPSILGPSTGGDPSPGPSP 1426
Score = 28.3 bits (60), Expect = 6.7
Identities = 20/61 (32%), Positives = 26/61 (42%)
Frame = +2
Query: 68 NSGVGPSAYRHSPQQRWTPASLPSTPQAGLGRQHRPERTRVPSPTYTRPSPAGKPGWGPS 247
++G GPS SP + P+ L P G P +P+ PS G P GPS
Sbjct: 1392 STGGGPSP-GPSPNEPSNPSILG--PSTGGDPSPGPSPNEPSNPSILGPSTGGDPSPGPS 1448
Query: 248 P 250
P
Sbjct: 1449 P 1449
>AF026213-9|AAB71302.2| 615|Caenorhabditis elegans Protein kinase
protein 9, isoform b protein.
Length = 615
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +2
Query: 86 SAYRHSPQQRWTPASLPSTPQAGLGRQHRPER 181
SAY+ WTP+ PST AG R R
Sbjct: 34 SAYKSRKYSTWTPSPQPSTMNAGTQTDFRTAR 65
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/75 (22%), Positives = 36/75 (48%)
Frame = +2
Query: 377 PQNCSGMPLNLSNSTSAS*DTVSNALAKSSTAT*HSRSFFLLSPSTASSTAEFSSVPSAQ 556
P SG+P NST+ S +N + + + H+ S+ + + +TA+++ F + +
Sbjct: 142 PSTSSGLPAGFLNSTANSSVGANNNHSSLNESPSHNSSYEMSTTTTANTSNSFDATANLL 201
Query: 557 INPRCRASGGQLANS 601
S G++A +
Sbjct: 202 KKGPLTISKGKVAKT 216
>Z93398-9|CAN99698.1| 1497|Caenorhabditis elegans Hypothetical
protein ZK1151.1i protein.
Length = 1497
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -1
Query: 762 NAWMARGEYPEIXR-QCRTVFVPKVERXRWTRGNIDRSRS 646
NA A G + E + R F KV+R + TRG +RSRS
Sbjct: 253 NAQQAHGGFSESSSYETREHFERKVQRVKKTRGERERSRS 292
>Z92788-9|CAN99699.1| 1497|Caenorhabditis elegans Hypothetical
protein ZK1151.1i protein.
Length = 1497
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -1
Query: 762 NAWMARGEYPEIXR-QCRTVFVPKVERXRWTRGNIDRSRS 646
NA A G + E + R F KV+R + TRG +RSRS
Sbjct: 253 NAQQAHGGFSESSSYETREHFERKVQRVKKTRGERERSRS 292
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 27.9 bits (59), Expect = 8.9
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +2
Query: 101 SPQQRWTPASLPSTPQAGLGRQHRPERTRVPSPTYTRPSPAGKP 232
SP++R +PA+ P Q+ R+ P R R PS + SP P
Sbjct: 477 SPRRRRSPAAAPRRRQSP-QRRRSPRRRRSPSSSSRSRSPPPPP 519
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +3
Query: 423 VPRETLCQMPWRSLAPPRDIPAASSCYPQ-APRPVLRNSPA 542
VP T P PP PAA+ Y Q APRP+ +PA
Sbjct: 174 VPVPTPVYQPTYCAVPPCPAPAATPVYAQPAPRPMPVYAPA 214
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,406,534
Number of Sequences: 27780
Number of extensions: 507788
Number of successful extensions: 1979
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1960
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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