Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP05_T7_P06
         (795 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       25   0.61 
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    24   1.4  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    23   4.3  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   7.5  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   7.5  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        21   10.0 

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 25.4 bits (53), Expect = 0.61
 Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
 Frame = +2

Query: 107 QQRWTPASLPSTPQAGLGRQHR-PERTRVPSPTYTRPSPAGKPGWGPS 247
           QQ   P+S    PQ    +  + P+R   P+P+   P P G PG  PS
Sbjct: 11  QQSQQPSSGAPGPQPSPHQSPQAPQRGSPPNPSQG-PPPGGPPGAPPS 57


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -1

Query: 690 ERXRWTRGNIDRSRSRRFPLRHFHSILARR 601
           +R   ++  I RSRSRR+  R   SI+ RR
Sbjct: 7   DRKSLSQRKIIRSRSRRYSKRFSSSIVDRR 36


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = -3

Query: 688 EXQVDPGEYRPISITSIPPETLSLHLGPEA 599
           E + +PG  RP+ I    P    L   PEA
Sbjct: 93  ESEAEPGNNRPVYIPQPRPPHPRLRREPEA 122



 Score = 22.6 bits (46), Expect = 4.3
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = -3

Query: 688 EXQVDPGEYRPISITSIPPETLSLHLGPEA 599
           E + +PG  RP+ I    P    L   PEA
Sbjct: 119 EPEAEPGNNRPVYIPQPRPPHPRLRREPEA 148


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 633 LRHFHSILARRLLASCPPDARQR 565
           +R+F  +LA   L  C P+ +QR
Sbjct: 1   MRYFIILLALVALGVCAPNVKQR 23


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -2

Query: 707  SLYLRWRXPGGPGGIST 657
            S+ + WR P  P G+ T
Sbjct: 1195 SILVSWRPPSQPNGVIT 1211



 Score = 21.4 bits (43), Expect = 10.0
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 456  RSLAPPRDIPAASSCYPQAPRPVLRN 533
            RS+   R+IP + S  P+ P P  RN
Sbjct: 1843 RSVGSARNIPVSGS--PEPPPPPPRN 1866


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -2

Query: 710 PSLYLRWRXPGG 675
           PS+YLRW    G
Sbjct: 256 PSVYLRWNLTSG 267


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 248,454
Number of Sequences: 438
Number of extensions: 6501
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25125039
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)