Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP05_T7_P05
         (791 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z37983-1|CAA86061.1|  276|Caenorhabditis elegans Hypothetical pr...   117   8e-27
AF039043-7|AAY86190.1|  103|Caenorhabditis elegans Hypothetical ...    29   2.9  
Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical p...    29   5.0  
Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical pr...    29   5.0  
Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical pr...    29   5.0  
AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.      29   5.0  
U58760-7|AAK31463.1|  188|Caenorhabditis elegans Hypothetical pr...    28   6.7  
U39742-3|AAY86225.1|  188|Caenorhabditis elegans Hypothetical pr...    28   6.7  
AL032621-5|CAA21492.2|  404|Caenorhabditis elegans Hypothetical ...    28   6.7  
Z81579-4|CAE17915.1|  212|Caenorhabditis elegans Hypothetical pr...    28   8.8  
Z66499-4|CAA91301.1|  164|Caenorhabditis elegans Hypothetical pr...    28   8.8  
U55854-7|AAK68158.1|  166|Caenorhabditis elegans Hypothetical pr...    28   8.8  
U55854-6|AAK68161.1|  197|Caenorhabditis elegans Hypothetical pr...    28   8.8  
U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ...    28   8.8  
AL033510-7|CAA22069.1|  124|Caenorhabditis elegans Hypothetical ...    28   8.8  
AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.    28   8.8  

>Z37983-1|CAA86061.1|  276|Caenorhabditis elegans Hypothetical
           protein B0393.1 protein.
          Length = 276

 Score =  117 bits (282), Expect = 8e-27
 Identities = 52/96 (54%), Positives = 69/96 (71%), Gaps = 5/96 (5%)
 Frame = -2

Query: 595 PAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLR 416
           P  DHQ +TEASYV +PVI+  NT+SPL+ +DI +PCN K   SIGLMWW+LARE+L LR
Sbjct: 127 PRIDHQAVTEASYVGVPVISFVNTESPLKLIDIGVPCNNKGERSIGLMWWMLAREILILR 186

Query: 415 GVLPRDQRW-----DVVVDLFFYRDPEESEKDEQQA 323
           G + R   +     +++ DL+FYRDP E+EK+E  A
Sbjct: 187 GKISRQTGFVLEGKEIMPDLYFYRDPTETEKEETGA 222



 Score = 69.7 bits (163), Expect = 2e-12
 Identities = 30/45 (66%), Positives = 37/45 (82%)
 Frame = -3

Query: 789 RAVVAIENPXDVXVISSRPFGQRAVLKFAAHTGATPIAGRFTXRC 655
           RA+ A+ENP DV V+S+RP+ QRA+LKFAAHTGAT I GRF+  C
Sbjct: 63  RAIAAVENPADVVVVSARPYAQRALLKFAAHTGATAIFGRFSPGC 107



 Score = 39.1 bits (87), Expect = 0.004
 Identities = 15/23 (65%), Positives = 18/23 (78%)
 Frame = -1

Query: 662 PGAFTNQIQAAFREPRLLIVLDP 594
           PG  TNQIQ  F+EPRLL++ DP
Sbjct: 105 PGCLTNQIQKTFKEPRLLVISDP 127


>AF039043-7|AAY86190.1|  103|Caenorhabditis elegans Hypothetical
           protein F39C12.4 protein.
          Length = 103

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = -1

Query: 212 CCTRCSSCFWSTPCSRRMVCP 150
           CCT    CF ST CS   VCP
Sbjct: 53  CCTN-EECFMSTECSYSAVCP 72


>Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical
            protein C47D12.1c protein.
          Length = 4053

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = -2

Query: 679  CGTFHXQVLLLTRSKLHSVNLVS*LYWTPAQDHQPITEASY 557
            CG+ H  +  + + +LHS+NL + LYW P    Q +T+  Y
Sbjct: 3336 CGS-HEVMNRVIKKQLHSLNLFNWLYWLP----QLVTDVRY 3371


>Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical protein
            C47D12.1b protein.
          Length = 4061

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = -2

Query: 679  CGTFHXQVLLLTRSKLHSVNLVS*LYWTPAQDHQPITEASY 557
            CG+ H  +  + + +LHS+NL + LYW P    Q +T+  Y
Sbjct: 3347 CGS-HEVMNRVIKKQLHSLNLFNWLYWLP----QLVTDVRY 3382


>Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical protein
            C47D12.1a protein.
          Length = 4064

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = -2

Query: 679  CGTFHXQVLLLTRSKLHSVNLVS*LYWTPAQDHQPITEASY 557
            CG+ H  +  + + +LHS+NL + LYW P    Q +T+  Y
Sbjct: 3347 CGS-HEVMNRVIKKQLHSLNLFNWLYWLP----QLVTDVRY 3382


>AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.
          Length = 4064

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = -2

Query: 679  CGTFHXQVLLLTRSKLHSVNLVS*LYWTPAQDHQPITEASY 557
            CG+ H  +  + + +LHS+NL + LYW P    Q +T+  Y
Sbjct: 3347 CGS-HEVMNRVIKKQLHSLNLFNWLYWLP----QLVTDVRY 3382


>U58760-7|AAK31463.1|  188|Caenorhabditis elegans Hypothetical
           protein C27A2.5 protein.
          Length = 188

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 13/39 (33%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
 Frame = -2

Query: 787 CCXSHREPR*CVXHLITALRSACCTEVCRAHR-CYAYCG 674
           CC    +   C     T  R+ CCT  C   R C   CG
Sbjct: 85  CCCCRPKCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 123


>U39742-3|AAY86225.1|  188|Caenorhabditis elegans Hypothetical
           protein C25F6.8 protein.
          Length = 188

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = -2

Query: 532 CNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVL 425
           CNTD+  R +     CNT   + +G+ + L+AR ++
Sbjct: 49  CNTDAEFRLIQCCSSCNT---NGVGIAYDLVARSLV 81


>AL032621-5|CAA21492.2|  404|Caenorhabditis elegans Hypothetical
           protein Y45F3A.8 protein.
          Length = 404

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
 Frame = -1

Query: 560 ICQHSCDCFVQHRLPTKICGHCYPM---QHQVFPLYWFD 453
           +C+HS    +      K CGHC PM   +HQ  P +  D
Sbjct: 342 LCEHSRYKTLMENYCPKACGHCIPMCRDRHQNCPQFHED 380


>Z81579-4|CAE17915.1|  212|Caenorhabditis elegans Hypothetical
           protein R13H4.8 protein.
          Length = 212

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 13/39 (33%), Positives = 14/39 (35%), Gaps = 1/39 (2%)
 Frame = -2

Query: 787 CCXSHREPR*CVXHLITALRSACCTEVCRAHR-CYAYCG 674
           CC        C     T  R+ CCT  C   R C   CG
Sbjct: 86  CCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 124


>Z66499-4|CAA91301.1|  164|Caenorhabditis elegans Hypothetical
           protein T01B7.8 protein.
          Length = 164

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 13/39 (33%), Positives = 14/39 (35%), Gaps = 1/39 (2%)
 Frame = -2

Query: 787 CCXSHREPR*CVXHLITALRSACCTEVCRAHR-CYAYCG 674
           CC        C     T  R+ CCT  C   R C   CG
Sbjct: 84  CCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 122


>U55854-7|AAK68158.1|  166|Caenorhabditis elegans Hypothetical
           protein C04G6.10 protein.
          Length = 166

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 13/39 (33%), Positives = 14/39 (35%), Gaps = 1/39 (2%)
 Frame = -2

Query: 787 CCXSHREPR*CVXHLITALRSACCTEVCRAHR-CYAYCG 674
           CC        C     T  R+ CCT  C   R C   CG
Sbjct: 85  CCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 123


>U55854-6|AAK68161.1|  197|Caenorhabditis elegans Hypothetical
           protein C04G6.7 protein.
          Length = 197

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 13/39 (33%), Positives = 14/39 (35%), Gaps = 1/39 (2%)
 Frame = -2

Query: 787 CCXSHREPR*CVXHLITALRSACCTEVCRAHR-CYAYCG 674
           CC        C     T  R+ CCT  C   R C   CG
Sbjct: 86  CCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 124


>U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418
            protein.
          Length = 1829

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
 Frame = +1

Query: 163  LLEQGVLQKQELQRVQQAGRYLQP--MKPLAPVF 258
            L+EQ ++ +++L+R   A R+LQP  + PLA  F
Sbjct: 1591 LIEQSLVIEEQLRRAAHANRHLQPDNVGPLAQRF 1624


>AL033510-7|CAA22069.1|  124|Caenorhabditis elegans Hypothetical
           protein Y40H7A.11 protein.
          Length = 124

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 481 TKSSHSIGLMWWLLA 437
           T+  H IG+MWWL A
Sbjct: 72  TRVEHKIGIMWWLCA 86


>AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.
          Length = 1829

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
 Frame = +1

Query: 163  LLEQGVLQKQELQRVQQAGRYLQP--MKPLAPVF 258
            L+EQ ++ +++L+R   A R+LQP  + PLA  F
Sbjct: 1591 LIEQSLVIEEQLRRAAHANRHLQPDNVGPLAQRF 1624


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,122,138
Number of Sequences: 27780
Number of extensions: 353474
Number of successful extensions: 1052
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 989
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1051
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)