Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP05_T7_P03
         (797 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_04_0044 + 17470457-17470613,17470696-17470789,17471069-174711...    29   5.7  
06_03_0938 - 26126669-26127115,26127197-26127619,26127727-26128047     28   7.5  

>05_04_0044 +
           17470457-17470613,17470696-17470789,17471069-17471132,
           17471378-17471477,17472027-17472085,17472572-17472647,
           17472761-17472832,17473788-17473932,17474044-17474299,
           17475190-17475305,17475503-17475723,17475996-17476024,
           17476622-17476740,17476828-17477023,17477242-17477250
          Length = 570

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = -3

Query: 456 LHHLRFEESSRPRXPCCAPSCSWDSKF 376
           LHH+ FE+ S PR P    S  W SKF
Sbjct: 532 LHHVDFEDPSLPRQP--KLSAQWYSKF 556


>06_03_0938 - 26126669-26127115,26127197-26127619,26127727-26128047
          Length = 396

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 17/45 (37%), Positives = 18/45 (40%)
 Frame = -3

Query: 621 N*VQDLSHREHSYTLGGCCAQQHDVPPRARGPAVRQQGQLHAAPG 487
           N  Q   H   S T       QH  PP A    VRQQ +  AA G
Sbjct: 307 NHAQPPHHDAGSKTAAAAKHSQHQPPPSAAAAVVRQQQEQAAAAG 351


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,667,877
Number of Sequences: 37544
Number of extensions: 332832
Number of successful extensions: 757
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 756
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)