Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP05_T7_P03
         (797 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              22   5.7  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    22   5.7  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    22   5.7  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    22   5.7  

>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +2

Query: 452 CNSYSRDALQRNPGAA*SCPCCR 520
           CNS  + ++    G +  C CCR
Sbjct: 73  CNSQVQPSVASTTGFSKECYCCR 95


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = -2

Query: 250 KNNFLIFSTKIIVFFSYGNIRLSTTRSSQALRDPF*ISIQNVHLKFKYMI 101
           +N  L+   KI++   YG+I  S T+ ++   D +    QN++L   Y I
Sbjct: 11  QNVVLVKKVKIVLLIFYGSIMFSMTQVNKEECDYY----QNLNLGEIYYI 56


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +2

Query: 452 CNSYSRDALQRNPGAA*SCPCCR 520
           CNS  + ++    G +  C CCR
Sbjct: 73  CNSQVQPSVASTTGFSKECYCCR 95


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 558 VVHNSLPTYNCVLGEINL 611
           +V  S+PTY C LG+  L
Sbjct: 649 LVATSMPTYICYLGKAYL 666


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,311
Number of Sequences: 438
Number of extensions: 3753
Number of successful extensions: 30
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25246416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)