Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP05_T7_O12
(774 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL390071-2|CAI17182.1| 2943|Homo sapiens neurobeachin protein. 31 3.5
AL357083-2|CAI15737.1| 2943|Homo sapiens neurobeachin protein. 31 3.5
AL356430-2|CAH74071.1| 2943|Homo sapiens neurobeachin protein. 31 3.5
AL161902-1|CAI16334.1| 2943|Homo sapiens neurobeachin protein. 31 3.5
AL161718-1|CAH72182.1| 2943|Homo sapiens neurobeachin protein. 31 3.5
AL139083-1|CAH71882.1| 2943|Homo sapiens neurobeachin protein. 31 3.5
AL138690-1|CAH72296.1| 2943|Homo sapiens neurobeachin protein. 31 3.5
AF467288-1|AAM53531.1| 2946|Homo sapiens BCL8B protein protein. 31 3.5
BC006350-1|AAH06350.1| 619|Homo sapiens BUD13 homolog (S. cerev... 31 4.6
BC048251-1|AAH48251.1| 322|Homo sapiens ZDHHC12 protein protein. 30 8.0
AL441992-6|CAI15406.1| 210|Homo sapiens zinc finger, DHHC-type ... 30 8.0
>AL390071-2|CAI17182.1| 2943|Homo sapiens neurobeachin protein.
Length = 2943
Score = 31.5 bits (68), Expect = 3.5
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -3
Query: 271 RFAFKTRDATSKPIWIAEIDAIGFFLKHVHH 179
R +K + S+ IW+ + +G+FLKH+ H
Sbjct: 748 RVIYKLLASKSESIWVQALKVLGYFLKHLGH 778
>AL357083-2|CAI15737.1| 2943|Homo sapiens neurobeachin protein.
Length = 2943
Score = 31.5 bits (68), Expect = 3.5
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -3
Query: 271 RFAFKTRDATSKPIWIAEIDAIGFFLKHVHH 179
R +K + S+ IW+ + +G+FLKH+ H
Sbjct: 748 RVIYKLLASKSESIWVQALKVLGYFLKHLGH 778
>AL356430-2|CAH74071.1| 2943|Homo sapiens neurobeachin protein.
Length = 2943
Score = 31.5 bits (68), Expect = 3.5
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -3
Query: 271 RFAFKTRDATSKPIWIAEIDAIGFFLKHVHH 179
R +K + S+ IW+ + +G+FLKH+ H
Sbjct: 748 RVIYKLLASKSESIWVQALKVLGYFLKHLGH 778
>AL161902-1|CAI16334.1| 2943|Homo sapiens neurobeachin protein.
Length = 2943
Score = 31.5 bits (68), Expect = 3.5
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -3
Query: 271 RFAFKTRDATSKPIWIAEIDAIGFFLKHVHH 179
R +K + S+ IW+ + +G+FLKH+ H
Sbjct: 748 RVIYKLLASKSESIWVQALKVLGYFLKHLGH 778
>AL161718-1|CAH72182.1| 2943|Homo sapiens neurobeachin protein.
Length = 2943
Score = 31.5 bits (68), Expect = 3.5
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -3
Query: 271 RFAFKTRDATSKPIWIAEIDAIGFFLKHVHH 179
R +K + S+ IW+ + +G+FLKH+ H
Sbjct: 748 RVIYKLLASKSESIWVQALKVLGYFLKHLGH 778
>AL139083-1|CAH71882.1| 2943|Homo sapiens neurobeachin protein.
Length = 2943
Score = 31.5 bits (68), Expect = 3.5
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -3
Query: 271 RFAFKTRDATSKPIWIAEIDAIGFFLKHVHH 179
R +K + S+ IW+ + +G+FLKH+ H
Sbjct: 748 RVIYKLLASKSESIWVQALKVLGYFLKHLGH 778
>AL138690-1|CAH72296.1| 2943|Homo sapiens neurobeachin protein.
Length = 2943
Score = 31.5 bits (68), Expect = 3.5
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -3
Query: 271 RFAFKTRDATSKPIWIAEIDAIGFFLKHVHH 179
R +K + S+ IW+ + +G+FLKH+ H
Sbjct: 748 RVIYKLLASKSESIWVQALKVLGYFLKHLGH 778
>AF467288-1|AAM53531.1| 2946|Homo sapiens BCL8B protein protein.
Length = 2946
Score = 31.5 bits (68), Expect = 3.5
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -3
Query: 271 RFAFKTRDATSKPIWIAEIDAIGFFLKHVHH 179
R +K + S+ IW+ + +G+FLKH+ H
Sbjct: 748 RVIYKLLASKSESIWVQALKVLGYFLKHLGH 778
>BC006350-1|AAH06350.1| 619|Homo sapiens BUD13 homolog (S.
cerevisiae) protein.
Length = 619
Score = 31.1 bits (67), Expect = 4.6
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = +1
Query: 46 AGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSR 180
+G S R +HD+ PS PR+ R S+D S PR PD R
Sbjct: 211 SGASPRRVRHDSPDPSP-PRRARHGSSDISSPRRVHNNSPDTSRR 254
>BC048251-1|AAH48251.1| 322|Homo sapiens ZDHHC12 protein protein.
Length = 322
Score = 30.3 bits (65), Expect = 8.0
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -2
Query: 374 TPLRPKPA*PNPARICSLWSPESRE 300
TP P P P PA +CS SPE R+
Sbjct: 68 TPTPPTPVLPGPASLCSPASPELRQ 92
>AL441992-6|CAI15406.1| 210|Homo sapiens zinc finger, DHHC-type
containing 12 protein.
Length = 210
Score = 30.3 bits (65), Expect = 8.0
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -2
Query: 374 TPLRPKPA*PNPARICSLWSPESRE 300
TP P P P PA +CS SPE R+
Sbjct: 68 TPTPPTPVLPGPASLCSPASPELRQ 92
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,085,018
Number of Sequences: 237096
Number of extensions: 2090365
Number of successful extensions: 4533
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4282
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4532
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9367263024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -