Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP05_T7_N17
         (783 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             26   0.34 
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    25   0.79 
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    25   0.79 
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    25   0.79 
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    22   7.4  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    21   9.8  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    21   9.8  
AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family p...    21   9.8  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 26.2 bits (55), Expect = 0.34
 Identities = 24/127 (18%), Positives = 49/127 (38%)
 Frame = -1

Query: 585  ILRNSKPSVSIQLHSQPASASNFRLTQTSGNRISIPPQQKKPTLDDDDFPSLSMGRDDHP 406
            + RNS+ +   +L    +   ++R    SG R      ++ PT+D    PS     DD  
Sbjct: 1332 LCRNSRRTPVPRLAQDSSEDESYRGPSASGGRPVPERPERVPTVDLSPSPSDRGRNDDGS 1391

Query: 405  NIGASSVQPPKVTMINSQEMQALKNNQTQSQPKKSQRSXGGVPCAVRHRPLPRRTPAVDH 226
            +   S   P  ++   S++  + +++    +  + +    G     R R      P    
Sbjct: 1392 DRLTSPPTPLSISRAGSRDEDSTRDSTKLDRSSREREVHNGGQQEDRDRKTLTSAPQQPQ 1451

Query: 225  RFQRKGQ 205
            + Q++ Q
Sbjct: 1452 QQQQQQQ 1458



 Score = 21.8 bits (44), Expect = 7.4
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 333  NNQTQSQPKKSQRSXGGVP 277
            +N+ Q +P+K   S GG+P
Sbjct: 1121 DNKPQLKPQKPFTSPGGIP 1139


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 25.0 bits (52), Expect = 0.79
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = -1

Query: 546 HSQPASASNFRLTQTSGNRISIPPQQKKPTLDDDDFPSLSMG 421
           H +   A     ++T+ N  S P    KP+L DD+   +++G
Sbjct: 244 HREADDAEESVSSETNHNERSTPRSHAKPSLIDDEPTEVTIG 285


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 25.0 bits (52), Expect = 0.79
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = -1

Query: 546 HSQPASASNFRLTQTSGNRISIPPQQKKPTLDDDDFPSLSMG 421
           H +   A     ++T+ N  S P    KP+L DD+   +++G
Sbjct: 244 HREADDAEESVSSETNHNERSTPRSHAKPSLIDDEPTEVTIG 285


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 25.0 bits (52), Expect = 0.79
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = -1

Query: 546 HSQPASASNFRLTQTSGNRISIPPQQKKPTLDDDDFPSLSMG 421
           H +   A     ++T+ N  S P    KP+L DD+   +++G
Sbjct: 244 HREADDAEESVSSETNHNERSTPRSHAKPSLIDDEPTEVTIG 285


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +1

Query: 352 LTIDHGDLRRLHTTSSDVGMVVS 420
           +T+D GD   +HT  +  G+ +S
Sbjct: 166 MTVDAGDSMFVHTFGAYFGLAIS 188


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -1

Query: 510 TQTSGNRISIPPQQKKPTLD 451
           TQTSG   S+PP      +D
Sbjct: 286 TQTSGINASLPPVSYTKAID 305


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -1

Query: 510 TQTSGNRISIPPQQKKPTLD 451
           TQTSG   S+PP      +D
Sbjct: 286 TQTSGINASLPPVSYTKAID 305


>AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family
           protein protein.
          Length = 166

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -1

Query: 432 LSMGRDDHPNIGASSVQPPKVTMI 361
           +S   DD     A++ QPP++T +
Sbjct: 74  ISSDHDDSDEEYAANSQPPRITSV 97


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,374
Number of Sequences: 438
Number of extensions: 2687
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24639531
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)