Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP05_T7_N11
(797 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 140 7e-33
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 140 7e-33
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 140 7e-33
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 140 7e-33
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 140 7e-33
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 140 7e-33
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 140 7e-33
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 140 7e-33
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 140 7e-33
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 140 7e-33
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 140 7e-33
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 140 7e-33
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 138 2e-32
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 136 1e-31
AF349752-1|AAL83912.1| 1013|Homo sapiens amplified in breast can... 30 8.4
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 140 bits (338), Expect = 7e-33
Identities = 67/147 (45%), Positives = 90/147 (61%)
Frame = -2
Query: 733 RGPFIXFXXXSGX*LAPSATFPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPL 554
RGP I + +G + PG+ LAPGGH+GRF IWT+SAF +LD L
Sbjct: 204 RGPCIIYNEDNGI-IKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDEL 262
Query: 553 FGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEVRKVLRAPNKRVIRATRKLNPLTNNK 374
+G+W+ + K N+NLP KM NTDL+R+LKS E+++ LRAP K++ R K NPL N +
Sbjct: 263 YGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLR 322
Query: 373 AMLKLNPYAAVLKRKAILELRRRKNLK 293
MLKLNPYA ++R IL R L+
Sbjct: 323 IMLKLNPYAKTMRRNTILRQARNHKLR 349
Score = 46.0 bits (104), Expect = 2e-04
Identities = 26/45 (57%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Frame = -1
Query: 797 YXXQRXRAGKGKMRNRXXIQRKGP--LHNXQXGXRXLTRAFRNIP 669
Y QR RAGKGKMRNR IQR+GP ++N G + +AFRNIP
Sbjct: 184 YASQRMRAGKGKMRNR-RIQRRGPCIIYNEDNG---IIKAFRNIP 224
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 140 bits (338), Expect = 7e-33
Identities = 67/147 (45%), Positives = 90/147 (61%)
Frame = -2
Query: 733 RGPFIXFXXXSGX*LAPSATFPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPL 554
RGP I + +G + PG+ LAPGGH+GRF IWT+SAF +LD L
Sbjct: 205 RGPCIIYNEDNGI-IKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDEL 263
Query: 553 FGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEVRKVLRAPNKRVIRATRKLNPLTNNK 374
+G+W+ + K N+NLP KM NTDL+R+LKS E+++ LRAP K++ R K NPL N +
Sbjct: 264 YGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLR 323
Query: 373 AMLKLNPYAAVLKRKAILELRRRKNLK 293
MLKLNPYA ++R IL R L+
Sbjct: 324 IMLKLNPYAKTMRRNTILRQARNHKLR 350
Score = 50.0 bits (114), Expect = 1e-05
Identities = 26/45 (57%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Frame = -1
Query: 797 YXXQRXRAGKGKMRNRXXIQRKGP--LHNXQXGXRXLTRAFRNIP 669
Y QR RAGKGKMRNR IQR+GP ++N G + +AFRNIP
Sbjct: 184 YASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG---IIKAFRNIP 225
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 140 bits (338), Expect = 7e-33
Identities = 67/147 (45%), Positives = 90/147 (61%)
Frame = -2
Query: 733 RGPFIXFXXXSGX*LAPSATFPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPL 554
RGP I + +G + PG+ LAPGGH+GRF IWT+SAF +LD L
Sbjct: 205 RGPCIIYNEDNGI-IKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDEL 263
Query: 553 FGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEVRKVLRAPNKRVIRATRKLNPLTNNK 374
+G+W+ + K N+NLP KM NTDL+R+LKS E+++ LRAP K++ R K NPL N +
Sbjct: 264 YGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLR 323
Query: 373 AMLKLNPYAAVLKRKAILELRRRKNLK 293
MLKLNPYA ++R IL R L+
Sbjct: 324 IMLKLNPYAKTMRRNTILRQARNHKLR 350
Score = 50.0 bits (114), Expect = 1e-05
Identities = 26/45 (57%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Frame = -1
Query: 797 YXXQRXRAGKGKMRNRXXIQRKGP--LHNXQXGXRXLTRAFRNIP 669
Y QR RAGKGKMRNR IQR+GP ++N G + +AFRNIP
Sbjct: 184 YASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG---IIKAFRNIP 225
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 140 bits (338), Expect = 7e-33
Identities = 67/147 (45%), Positives = 90/147 (61%)
Frame = -2
Query: 733 RGPFIXFXXXSGX*LAPSATFPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPL 554
RGP I + +G + PG+ LAPGGH+GRF IWT+SAF +LD L
Sbjct: 205 RGPCIIYNEDNGI-IKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDEL 263
Query: 553 FGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEVRKVLRAPNKRVIRATRKLNPLTNNK 374
+G+W+ + K N+NLP KM NTDL+R+LKS E+++ LRAP K++ R K NPL N +
Sbjct: 264 YGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLR 323
Query: 373 AMLKLNPYAAVLKRKAILELRRRKNLK 293
MLKLNPYA ++R IL R L+
Sbjct: 324 IMLKLNPYAKTMRRNTILRQARNHKLR 350
Score = 50.0 bits (114), Expect = 1e-05
Identities = 26/45 (57%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Frame = -1
Query: 797 YXXQRXRAGKGKMRNRXXIQRKGP--LHNXQXGXRXLTRAFRNIP 669
Y QR RAGKGKMRNR IQR+GP ++N G + +AFRNIP
Sbjct: 184 YASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG---IIKAFRNIP 225
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 140 bits (338), Expect = 7e-33
Identities = 67/147 (45%), Positives = 90/147 (61%)
Frame = -2
Query: 733 RGPFIXFXXXSGX*LAPSATFPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPL 554
RGP I + +G + PG+ LAPGGH+GRF IWT+SAF +LD L
Sbjct: 205 RGPCIIYNEDNGI-IKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDEL 263
Query: 553 FGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEVRKVLRAPNKRVIRATRKLNPLTNNK 374
+G+W+ + K N+NLP KM NTDL+R+LKS E+++ LRAP K++ R K NPL N +
Sbjct: 264 YGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLR 323
Query: 373 AMLKLNPYAAVLKRKAILELRRRKNLK 293
MLKLNPYA ++R IL R L+
Sbjct: 324 IMLKLNPYAKTMRRNTILRQARNHKLR 350
Score = 50.0 bits (114), Expect = 1e-05
Identities = 26/45 (57%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Frame = -1
Query: 797 YXXQRXRAGKGKMRNRXXIQRKGP--LHNXQXGXRXLTRAFRNIP 669
Y QR RAGKGKMRNR IQR+GP ++N G + +AFRNIP
Sbjct: 184 YASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG---IIKAFRNIP 225
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 140 bits (338), Expect = 7e-33
Identities = 67/147 (45%), Positives = 90/147 (61%)
Frame = -2
Query: 733 RGPFIXFXXXSGX*LAPSATFPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPL 554
RGP I + +G + PG+ LAPGGH+GRF IWT+SAF +LD L
Sbjct: 205 RGPCIIYNEDNGI-IKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDEL 263
Query: 553 FGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEVRKVLRAPNKRVIRATRKLNPLTNNK 374
+G+W+ + K N+NLP KM NTDL+R+LKS E+++ LRAP K++ R K NPL N +
Sbjct: 264 YGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLR 323
Query: 373 AMLKLNPYAAVLKRKAILELRRRKNLK 293
MLKLNPYA ++R IL R L+
Sbjct: 324 IMLKLNPYAKTMRRNTILRQARNHKLR 350
Score = 50.0 bits (114), Expect = 1e-05
Identities = 26/45 (57%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Frame = -1
Query: 797 YXXQRXRAGKGKMRNRXXIQRKGP--LHNXQXGXRXLTRAFRNIP 669
Y QR RAGKGKMRNR IQR+GP ++N G + +AFRNIP
Sbjct: 184 YASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG---IIKAFRNIP 225
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 140 bits (338), Expect = 7e-33
Identities = 67/147 (45%), Positives = 90/147 (61%)
Frame = -2
Query: 733 RGPFIXFXXXSGX*LAPSATFPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPL 554
RGP I + +G + PG+ LAPGGH+GRF IWT+SAF +LD L
Sbjct: 205 RGPCIIYNEDNGI-IKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDEL 263
Query: 553 FGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEVRKVLRAPNKRVIRATRKLNPLTNNK 374
+G+W+ + K N+NLP KM NTDL+R+LKS E+++ LRAP K++ R K NPL N +
Sbjct: 264 YGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLR 323
Query: 373 AMLKLNPYAAVLKRKAILELRRRKNLK 293
MLKLNPYA ++R IL R L+
Sbjct: 324 IMLKLNPYAKTMRRNTILRQARNHKLR 350
Score = 50.0 bits (114), Expect = 1e-05
Identities = 26/45 (57%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Frame = -1
Query: 797 YXXQRXRAGKGKMRNRXXIQRKGP--LHNXQXGXRXLTRAFRNIP 669
Y QR RAGKGKMRNR IQR+GP ++N G + +AFRNIP
Sbjct: 184 YASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG---IIKAFRNIP 225
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 140 bits (338), Expect = 7e-33
Identities = 67/147 (45%), Positives = 90/147 (61%)
Frame = -2
Query: 733 RGPFIXFXXXSGX*LAPSATFPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPL 554
RGP I + +G + PG+ LAPGGH+GRF IWT+SAF +LD L
Sbjct: 205 RGPCIIYNEDNGI-IKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDEL 263
Query: 553 FGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEVRKVLRAPNKRVIRATRKLNPLTNNK 374
+G+W+ + K N+NLP KM NTDL+R+LKS E+++ LRAP K++ R K NPL N +
Sbjct: 264 YGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLR 323
Query: 373 AMLKLNPYAAVLKRKAILELRRRKNLK 293
MLKLNPYA ++R IL R L+
Sbjct: 324 IMLKLNPYAKTMRRNTILRQARNHKLR 350
Score = 50.0 bits (114), Expect = 1e-05
Identities = 26/45 (57%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Frame = -1
Query: 797 YXXQRXRAGKGKMRNRXXIQRKGP--LHNXQXGXRXLTRAFRNIP 669
Y QR RAGKGKMRNR IQR+GP ++N G + +AFRNIP
Sbjct: 184 YASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG---IIKAFRNIP 225
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 140 bits (338), Expect = 7e-33
Identities = 67/147 (45%), Positives = 90/147 (61%)
Frame = -2
Query: 733 RGPFIXFXXXSGX*LAPSATFPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPL 554
RGP I + +G + PG+ LAPGGH+GRF IWT+SAF +LD L
Sbjct: 205 RGPCIIYNEDNGI-IKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDEL 263
Query: 553 FGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEVRKVLRAPNKRVIRATRKLNPLTNNK 374
+G+W+ + K N+NLP KM NTDL+R+LKS E+++ LRAP K++ R K NPL N +
Sbjct: 264 YGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLR 323
Query: 373 AMLKLNPYAAVLKRKAILELRRRKNLK 293
MLKLNPYA ++R IL R L+
Sbjct: 324 IMLKLNPYAKTMRRNTILRQARNHKLR 350
Score = 50.0 bits (114), Expect = 1e-05
Identities = 26/45 (57%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Frame = -1
Query: 797 YXXQRXRAGKGKMRNRXXIQRKGP--LHNXQXGXRXLTRAFRNIP 669
Y QR RAGKGKMRNR IQR+GP ++N G + +AFRNIP
Sbjct: 184 YASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG---IIKAFRNIP 225
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 140 bits (338), Expect = 7e-33
Identities = 67/147 (45%), Positives = 90/147 (61%)
Frame = -2
Query: 733 RGPFIXFXXXSGX*LAPSATFPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPL 554
RGP I + +G + PG+ LAPGGH+GRF IWT+SAF +LD L
Sbjct: 205 RGPCIIYNEDNGI-IKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDEL 263
Query: 553 FGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEVRKVLRAPNKRVIRATRKLNPLTNNK 374
+G+W+ + K N+NLP KM NTDL+R+LKS E+++ LRAP K++ R K NPL N +
Sbjct: 264 YGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLR 323
Query: 373 AMLKLNPYAAVLKRKAILELRRRKNLK 293
MLKLNPYA ++R IL R L+
Sbjct: 324 IMLKLNPYAKTMRRNTILRQARNHKLR 350
Score = 50.0 bits (114), Expect = 1e-05
Identities = 26/45 (57%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Frame = -1
Query: 797 YXXQRXRAGKGKMRNRXXIQRKGP--LHNXQXGXRXLTRAFRNIP 669
Y QR RAGKGKMRNR IQR+GP ++N G + +AFRNIP
Sbjct: 184 YASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG---IIKAFRNIP 225
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 140 bits (338), Expect = 7e-33
Identities = 67/147 (45%), Positives = 90/147 (61%)
Frame = -2
Query: 733 RGPFIXFXXXSGX*LAPSATFPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPL 554
RGP I + +G + PG+ LAPGGH+GRF IWT+SAF +LD L
Sbjct: 205 RGPCIIYNEDNGI-IKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDEL 263
Query: 553 FGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEVRKVLRAPNKRVIRATRKLNPLTNNK 374
+G+W+ + K N+NLP KM NTDL+R+LKS E+++ LRAP K++ R K NPL N +
Sbjct: 264 YGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLR 323
Query: 373 AMLKLNPYAAVLKRKAILELRRRKNLK 293
MLKLNPYA ++R IL R L+
Sbjct: 324 IMLKLNPYAKTMRRNTILRQARNHKLR 350
Score = 50.0 bits (114), Expect = 1e-05
Identities = 26/45 (57%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Frame = -1
Query: 797 YXXQRXRAGKGKMRNRXXIQRKGP--LHNXQXGXRXLTRAFRNIP 669
Y QR RAGKGKMRNR IQR+GP ++N G + +AFRNIP
Sbjct: 184 YASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG---IIKAFRNIP 225
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 140 bits (338), Expect = 7e-33
Identities = 67/147 (45%), Positives = 90/147 (61%)
Frame = -2
Query: 733 RGPFIXFXXXSGX*LAPSATFPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPL 554
RGP I + +G + PG+ LAPGGH+GRF IWT+SAF +LD L
Sbjct: 205 RGPCIIYNEDNGI-IKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDEL 263
Query: 553 FGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEVRKVLRAPNKRVIRATRKLNPLTNNK 374
+G+W+ + K N+NLP KM NTDL+R+LKS E+++ LRAP K++ R K NPL N +
Sbjct: 264 YGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLR 323
Query: 373 AMLKLNPYAAVLKRKAILELRRRKNLK 293
MLKLNPYA ++R IL R L+
Sbjct: 324 IMLKLNPYAKTMRRNTILRQARNHKLR 350
Score = 50.0 bits (114), Expect = 1e-05
Identities = 26/45 (57%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Frame = -1
Query: 797 YXXQRXRAGKGKMRNRXXIQRKGP--LHNXQXGXRXLTRAFRNIP 669
Y QR RAGKGKMRNR IQR+GP ++N G + +AFRNIP
Sbjct: 184 YASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG---IIKAFRNIP 225
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 138 bits (334), Expect = 2e-32
Identities = 67/147 (45%), Positives = 90/147 (61%)
Frame = -2
Query: 733 RGPFIXFXXXSGX*LAPSATFPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPL 554
RGP I + +G + PG+ LAPGGH+GRF IWT+SAF +LD L
Sbjct: 219 RGPCIIYNEDNGI-IKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDEL 277
Query: 553 FGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEVRKVLRAPNKRVIRATRKLNPLTNNK 374
+G+W+ + K N+NLP KM NTDL+R+LKS E+++ LRAP K++ R K NPL N +
Sbjct: 278 YGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLR 337
Query: 373 AMLKLNPYAAVLKRKAILELRRRKNLK 293
MLKLNPYA ++R IL R L+
Sbjct: 338 IMLKLNPYAKTMRRNTILCQARNHKLR 364
Score = 50.0 bits (114), Expect = 1e-05
Identities = 26/45 (57%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Frame = -1
Query: 797 YXXQRXRAGKGKMRNRXXIQRKGP--LHNXQXGXRXLTRAFRNIP 669
Y QR RAGKGKMRNR IQR+GP ++N G + +AFRNIP
Sbjct: 198 YASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG---IIKAFRNIP 239
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 136 bits (328), Expect = 1e-31
Identities = 65/147 (44%), Positives = 89/147 (60%)
Frame = -2
Query: 733 RGPFIXFXXXSGX*LAPSATFPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPL 554
RGP I + +G + PG+ LAPGGH+GRF IW +SAF +LD L
Sbjct: 205 RGPCIIYNEDNGI-IKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWIESAFRKLDEL 263
Query: 553 FGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEVRKVLRAPNKRVIRATRKLNPLTNNK 374
+G+W+ + K N+NLP +M NTDL+R+LKS E+++ LRAP K++ R K NPL N +
Sbjct: 264 YGTWRKAASLKSNYNLPMHEMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLR 323
Query: 373 AMLKLNPYAAVLKRKAILELRRRKNLK 293
MLKLNPYA ++R IL R L+
Sbjct: 324 IMLKLNPYAKTMRRNTILRQARNHKLR 350
Score = 50.0 bits (114), Expect = 1e-05
Identities = 26/45 (57%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Frame = -1
Query: 797 YXXQRXRAGKGKMRNRXXIQRKGP--LHNXQXGXRXLTRAFRNIP 669
Y QR RAGKGKMRNR IQR+GP ++N G + +AFRNIP
Sbjct: 184 YASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG---IIKAFRNIP 225
>AF349752-1|AAL83912.1| 1013|Homo sapiens amplified in breast cancer
1 protein.
Length = 1013
Score = 30.3 bits (65), Expect = 8.4
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -3
Query: 585 LSPHSAGLTPYSGHGRHHRNKRRTSTCPSQRWPTLTSHVFSSLMRSG 445
+ PH A L G G + K ++T P QR P L +F ++M +G
Sbjct: 560 IQPHGAKLLEELGTGLIQQYKPDSTTAPDQRAPVLLVVMFWTMMLNG 606
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,939,611
Number of Sequences: 237096
Number of extensions: 1875456
Number of successful extensions: 3745
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3403
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3744
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9813323168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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