Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP05_T7_M24
(792 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase Ppk38|Schizo... 30 0.44
SPAPB1E7.06c |eme1||Holliday junction resolvase subunit Eme1|Sch... 29 1.0
SPAC22A12.08c |||cardiolipin synthase/ hydrolase fusion protein ... 28 1.3
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 28 1.3
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 3.1
SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr... 26 5.4
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 26 5.4
SPBC29A3.14c |trt1||telomerase reverse transcriptase 1 protein T... 26 7.1
SPAC458.03 |||nuclear telomere cap complex subunit |Schizosaccha... 26 7.1
SPAC57A7.07c |||homocysteine methyltransferase |Schizosaccharomy... 25 9.4
SPBC3F6.04c |||U3 snoRNP protein Nop14 |Schizosaccharomyces pomb... 25 9.4
SPAC12G12.06c |||RNA 3'-terminal phosphate cyclase |Schizosaccha... 25 9.4
SPAC19A8.12 |dcp2||mRNA decapping complex subunit Dcp2|Schizosac... 25 9.4
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 25 9.4
>SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase
Ppk38|Schizosaccharomyces pombe|chr 3|||Manual
Length = 650
Score = 29.9 bits (64), Expect = 0.44
Identities = 20/55 (36%), Positives = 25/55 (45%)
Frame = +2
Query: 473 HHSLENKGAKPLXPCPVTRG*DTLMEPLMTTEALTPARTPSSTAPGGLMEMDVKS 637
H S NK A P P ++ P A TP+ SS AP GL E++ KS
Sbjct: 511 HTSSLNKVAAAPAPVPKPVNLKSVENPQNNISAPTPSSLQSSNAPVGLGEVESKS 565
>SPAPB1E7.06c |eme1||Holliday junction resolvase subunit
Eme1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 738
Score = 28.7 bits (61), Expect = 1.0
Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -1
Query: 714 SSHPPLRSRXHQPDHQ-IPRFHTPTTPDLTSIS 619
+S PP S QP HQ FHTPT P T +S
Sbjct: 120 NSSPP-NSLSSQPKHQEFHLFHTPTIPRTTQLS 151
>SPAC22A12.08c |||cardiolipin synthase/ hydrolase fusion protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 570
Score = 28.3 bits (60), Expect = 1.3
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 101 RNMARIYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVVVQYG 229
R +A Y+ + LGG++ S+ EK F + N DV+ + G
Sbjct: 112 RALADKYKHVLVLGGKDNSVRETAEKYGFKSVINELDVIAKLG 154
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 28.3 bits (60), Expect = 1.3
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = -2
Query: 677 PIIKSPDSIHQPPQT*HPFPSIPLAPY*KEFAPGL-KPPLSSEAPSAYLTPSSLGMXKGV 501
P++ S+HQPP P +P AP + AP + + P + P+ + P +L + +
Sbjct: 521 PVVPEAPSVHQPPAA-PVAPEVPSAPQ-RPAAPVVPEAPSVPQRPAVPVVPEALSVPQ-- 576
Query: 500 SPPYFQVNDE 471
PP V E
Sbjct: 577 -PPVAPVAPE 585
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 27.1 bits (57), Expect = 3.1
Identities = 21/53 (39%), Positives = 27/53 (50%)
Frame = -2
Query: 677 PIIKSPDSIHQPPQT*HPFPSIPLAPY*KEFAPGLKPPLSSEAPSAYLTPSSL 519
P +P S +PP + P PSIP P +P PP+ S+AP PSSL
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIP-PP-----SPASAPPIPSKAPP---IPSSL 171
>SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1275
Score = 26.2 bits (55), Expect = 5.4
Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Frame = -2
Query: 680 NPIIKSPDSIHQPPQT*HPFPSIPLAPY*KEFAPGLKPPLSSEA---PSAYLTPSSLGM 513
+P + SP + + P P P++P P +PPL S S Y T SS +
Sbjct: 137 DPFLTSPGNKQNTVDSFRPLPETPVSPGGSLVHPLPRPPLPSSVSSHSSPYSTTSSTSL 195
>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 26.2 bits (55), Expect = 5.4
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -3
Query: 466 KLRALLVVIPRILRSPPPTHPLIEDV 389
KLR++L I ++LR P P PL+ +
Sbjct: 105 KLRSVLEQILQLLREPNPDDPLVASI 130
>SPBC29A3.14c |trt1||telomerase reverse transcriptase 1 protein Trt1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 988
Score = 25.8 bits (54), Expect = 7.1
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = -3
Query: 355 KVKIADNNLVTHKELALKVSSIIGTRVYVFDPSCYFSTPPFDTVL 221
K K+ D V K + +S T+ +V + YF PF+ V+
Sbjct: 608 KKKLKDPEFVIRKYATIHATSDRATKNFVSEAFSYFDMVPFEKVV 652
>SPAC458.03 |||nuclear telomere cap complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 868
Score = 25.8 bits (54), Expect = 7.1
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 143 LRDLPPVGRSSPCFFRLLWSLRKILIPYSSQFW 45
L++L +G SPC RL L +++P FW
Sbjct: 21 LKELQHIGVPSPCNLRLYHELISVIVP---TFW 50
>SPAC57A7.07c |||homocysteine methyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 308
Score = 25.4 bits (53), Expect = 9.4
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -3
Query: 331 LVTHKELALKVSSIIGTRVYVFDPSCY 251
+V H E LKV II T Y D S Y
Sbjct: 37 VVKHHEEFLKVCDIISTFTYQLDASIY 63
>SPBC3F6.04c |||U3 snoRNP protein Nop14 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 827
Score = 25.4 bits (53), Expect = 9.4
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = -1
Query: 714 SSHPPLRSRXHQP---DHQIPRFHTPTTPDLTSISINPPGAVLEGVRA 580
++ PL + H+P Q+P+F + D +S I+P A L +RA
Sbjct: 727 ANRKPLALQSHRPLGITSQVPKFEEGYSLDKSSHDIDPERAQLNKLRA 774
>SPAC12G12.06c |||RNA 3'-terminal phosphate cyclase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 363
Score = 25.4 bits (53), Expect = 9.4
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +2
Query: 494 GAKPLXPCPVTRG*DTLMEPLMTTEALTPARTPSSTAPGGLMEMDVKSGV 643
G + + CP T+G +EP++ A+TP+S G+ + GV
Sbjct: 81 GGRVVHDCPTTKGIGYFLEPILILCLF--AKTPTSLTLTGVTSSNEDIGV 128
>SPAC19A8.12 |dcp2||mRNA decapping complex subunit
Dcp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 25.4 bits (53), Expect = 9.4
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -3
Query: 721 LCIKPPSPAISXTSTRSSNPPIPYTNHPRLNIHFHQS 611
L + P +P+ S S N + TN P LN HF QS
Sbjct: 346 LGLDPKNPSASFPRVVSQNNML--TNKPVLNNHFQQS 380
>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 25.4 bits (53), Expect = 9.4
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 116 IYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVV 217
++Q A+ LG RS RC KSSF+ + DVV
Sbjct: 33 LHQQAL-LGRNGRSSKRCSPKSSFIRNSPKIDVV 65
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,930,340
Number of Sequences: 5004
Number of extensions: 58279
Number of successful extensions: 202
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 202
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 385381248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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