Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP05_T7_L23
(788 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 42 0.001
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 40 0.005
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 40 0.005
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 33 0.34
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 33 0.34
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 33 0.34
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 33 0.34
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 32 0.78
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 32 0.78
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 32 0.78
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 32 0.78
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 32 0.78
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 32 0.78
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 32 0.78
BT029263-1|ABK30900.1| 495|Drosophila melanogaster IP03351p pro... 32 1.0
AE014296-2454|AAF49683.1| 602|Drosophila melanogaster CG3020-PA... 32 1.0
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 31 1.4
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 31 1.4
BT022200-1|AAY51594.1| 751|Drosophila melanogaster IP01101p pro... 31 1.8
AY574373-1|AAS87366.1| 595|Drosophila melanogaster transcriptio... 31 1.8
AY069805-1|AAL39950.1| 546|Drosophila melanogaster SD04477p pro... 31 1.8
AF238310-1|AAF69496.1| 595|Drosophila melanogaster Fos-related ... 31 1.8
AE014297-4439|AAZ83994.1| 617|Drosophila melanogaster CG33956-P... 31 1.8
AE014297-4438|AAZ83993.1| 546|Drosophila melanogaster CG33956-P... 31 1.8
AE014297-4436|AAZ83992.1| 595|Drosophila melanogaster CG33956-P... 31 1.8
AE014297-4435|AAZ83991.1| 722|Drosophila melanogaster CG33956-P... 31 1.8
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 31 2.4
U75467-1|AAB18341.1| 724|Drosophila melanogaster Atu protein. 30 4.1
BT024212-1|ABC86274.1| 1085|Drosophila melanogaster RE28791p pro... 30 4.1
AY075403-1|AAL68232.1| 725|Drosophila melanogaster LD30655p pro... 30 4.1
AE014297-303|AAF51991.1| 725|Drosophila melanogaster CG1433-PA ... 30 4.1
AE014296-973|AAF50767.2| 1929|Drosophila melanogaster CG5146-PA ... 30 4.1
AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends l... 29 5.5
AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP mot... 29 5.5
AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends p... 29 5.5
AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,... 29 5.5
AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,... 29 5.5
AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,... 29 5.5
U88578-1|AAD09632.1| 2222|Drosophila melanogaster sdk protein. 29 7.2
BT029031-1|ABJ16964.1| 184|Drosophila melanogaster IP02265p pro... 29 7.2
AY128500-1|AAM75093.1| 513|Drosophila melanogaster RH70372p pro... 29 7.2
AY051612-1|AAK93036.1| 513|Drosophila melanogaster GH25653p pro... 29 7.2
AY047580-1|AAK77312.1| 184|Drosophila melanogaster GH09112p pro... 29 7.2
AE014298-2165|AAN09356.1| 426|Drosophila melanogaster CG6340-PD... 29 7.2
AE014298-2162|AAF48464.1| 513|Drosophila melanogaster CG6340-PB... 29 7.2
AE013599-3027|AAF57459.1| 184|Drosophila melanogaster CG18066-P... 29 7.2
BT023770-1|AAZ41778.1| 931|Drosophila melanogaster LP23752p pro... 29 9.6
AY195738-1|AAO43730.1| 917|Drosophila melanogaster kekkon5 prec... 29 9.6
AY069803-1|AAL39948.1| 856|Drosophila melanogaster SD04280p pro... 29 9.6
AL132792-1|CAB65848.1| 2224|Drosophila melanogaster EG:BACR19J1.... 29 9.6
AL031583-10|CAA20900.1| 504|Drosophila melanogaster EG:34F3.1 p... 29 9.6
AE014298-3176|AAN09565.1| 856|Drosophila melanogaster CG14619-P... 29 9.6
AE014298-3175|AAN09564.1| 856|Drosophila melanogaster CG14619-P... 29 9.6
AE014298-3174|AAF50952.2| 856|Drosophila melanogaster CG14619-P... 29 9.6
AE014298-2840|AAN09488.1| 931|Drosophila melanogaster CG12199-P... 29 9.6
AE014298-2839|AAF48953.2| 931|Drosophila melanogaster CG12199-P... 29 9.6
AE014298-113|AAF45555.2| 1561|Drosophila melanogaster CG12467-PA... 29 9.6
AE014298-97|AAN09029.4| 2224|Drosophila melanogaster CG5227-PD, ... 29 9.6
AE014298-96|AAF45541.5| 2224|Drosophila melanogaster CG5227-PB, ... 29 9.6
AE014298-95|AAN09027.4| 2224|Drosophila melanogaster CG5227-PA, ... 29 9.6
AE014298-94|AAN09028.5| 2232|Drosophila melanogaster CG5227-PC, ... 29 9.6
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 41.9 bits (94), Expect = 0.001
Identities = 25/87 (28%), Positives = 39/87 (44%)
Frame = -1
Query: 575 RALQVIQSRFCRIAVGAPWFLRNVXXXXXXXXXXXSKYLQSASLRHFEKAARHENPLIVA 396
+ +Q IQ++ R+ G WF+RN + S R+ ++ RH N L A
Sbjct: 819 KRIQAIQNKVARLITGCEWFVRNTTLHRDLKLATVFDEINKHSSRYHDRLERHRNRLASA 878
Query: 395 AGNYIPDPVDRMVNRRRRPKHVITDPP 315
P R +N RR+P+ +IT P
Sbjct: 879 LNRSRP---PRRLN-RRQPRDLITRSP 901
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 39.5 bits (88), Expect = 0.005
Identities = 19/55 (34%), Positives = 25/55 (45%)
Frame = -1
Query: 569 LQVIQSRFCRIAVGAPWFLRNVXXXXXXXXXXXSKYLQSASLRHFEKAARHENPL 405
+Q QSR RI GAPW+LRN + + ++ EK H NPL
Sbjct: 812 IQRAQSRILRIITGAPWYLRNENIHRDLKIKLVIEVIAEKKTKYNEKLTTHTNPL 866
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 39.5 bits (88), Expect = 0.005
Identities = 19/55 (34%), Positives = 25/55 (45%)
Frame = -1
Query: 569 LQVIQSRFCRIAVGAPWFLRNVXXXXXXXXXXXSKYLQSASLRHFEKAARHENPL 405
+Q QSR RI GAPW+LRN + + ++ EK H NPL
Sbjct: 812 IQRAQSRILRIITGAPWYLRNENIHRDLKIKLVIEVIAEKKTKYNEKLTTHTNPL 866
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 33.5 bits (73), Expect = 0.34
Identities = 12/33 (36%), Positives = 23/33 (69%)
Frame = -2
Query: 658 PITTDEVRDAIHNLQPRKAPGSDGIHNRALFRL 560
P+T E+ I++L+ +KAPG+D ++N+ + L
Sbjct: 36 PVTLAELNGLINSLELKKAPGTDNLNNKTIINL 68
Score = 29.5 bits (63), Expect = 5.5
Identities = 18/79 (22%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Frame = -1
Query: 581 QPRALQVIQSRFCRIAVGAPWFLRNVXXXXXXXXXXXSKYLQSASLRHFEKAARHENPLI 402
Q + +Q +++++ R + A + R + AS R+ HENPLI
Sbjct: 434 QAKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFDETFDKASQRYANSLTDHENPLI 493
Query: 401 --VAAGNYIPDPVDRMVNR 351
+ Y P+ ++ NR
Sbjct: 494 YDLLINAYKPNRLELSKNR 512
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 33.5 bits (73), Expect = 0.34
Identities = 12/33 (36%), Positives = 23/33 (69%)
Frame = -2
Query: 658 PITTDEVRDAIHNLQPRKAPGSDGIHNRALFRL 560
P+T E+ I++L+ +KAPG+D ++N+ + L
Sbjct: 483 PVTLAELNGLINSLELKKAPGTDNLNNKTIINL 515
Score = 29.9 bits (64), Expect = 4.1
Identities = 18/79 (22%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Frame = -1
Query: 581 QPRALQVIQSRFCRIAVGAPWFLRNVXXXXXXXXXXXSKYLQSASLRHFEKAARHENPLI 402
Q + +Q +++++ R + A + R + AS R+ HENPLI
Sbjct: 881 QAKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFDEIFDKASQRYANSLTDHENPLI 940
Query: 401 --VAAGNYIPDPVDRMVNR 351
+ Y P+ ++ NR
Sbjct: 941 YDLLINAYKPNRLELSKNR 959
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 33.5 bits (73), Expect = 0.34
Identities = 12/33 (36%), Positives = 23/33 (69%)
Frame = -2
Query: 658 PITTDEVRDAIHNLQPRKAPGSDGIHNRALFRL 560
P+T E+ I++L+ +KAPG+D ++N+ + L
Sbjct: 483 PVTLAELNGLINSLELKKAPGTDNLNNKTIINL 515
Score = 29.9 bits (64), Expect = 4.1
Identities = 18/79 (22%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Frame = -1
Query: 581 QPRALQVIQSRFCRIAVGAPWFLRNVXXXXXXXXXXXSKYLQSASLRHFEKAARHENPLI 402
Q + +Q +++++ R + A + R + AS R+ HENPLI
Sbjct: 881 QAKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFDEIFDKASQRYANSLTDHENPLI 940
Query: 401 --VAAGNYIPDPVDRMVNR 351
+ Y P+ ++ NR
Sbjct: 941 YDLLINAYKPNRLELSKNR 959
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 33.5 bits (73), Expect = 0.34
Identities = 12/33 (36%), Positives = 23/33 (69%)
Frame = -2
Query: 658 PITTDEVRDAIHNLQPRKAPGSDGIHNRALFRL 560
P+T E+ I++L+ +KAPG+D ++N+ + L
Sbjct: 483 PVTLAELNGLINSLELKKAPGTDNLNNKTIINL 515
Score = 29.9 bits (64), Expect = 4.1
Identities = 18/79 (22%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Frame = -1
Query: 581 QPRALQVIQSRFCRIAVGAPWFLRNVXXXXXXXXXXXSKYLQSASLRHFEKAARHENPLI 402
Q + +Q +++++ R + A + R + AS R+ HENPLI
Sbjct: 881 QAKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFDEIFDKASQRYANSLTDHENPLI 940
Query: 401 --VAAGNYIPDPVDRMVNR 351
+ Y P+ ++ NR
Sbjct: 941 YDLLINAYKPNRLELSKNR 959
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 32.3 bits (70), Expect = 0.78
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -2
Query: 658 PITTDEVRDAIHNLQPRKAPGSDGIHNRAL 569
PIT E+ D I NL+ KAPG D I N+ +
Sbjct: 480 PITLKELNDEIKNLKNSKAPGKDLITNQLI 509
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 32.3 bits (70), Expect = 0.78
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -2
Query: 658 PITTDEVRDAIHNLQPRKAPGSDGIHNRAL 569
PIT E+ D I NL+ KAPG D I N+ +
Sbjct: 364 PITLKELNDEIKNLKNSKAPGKDLITNQLI 393
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 32.3 bits (70), Expect = 0.78
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -2
Query: 658 PITTDEVRDAIHNLQPRKAPGSDGIHNRAL 569
PIT E+ D I NL+ KAPG D I N+ +
Sbjct: 480 PITLKELNDEIKNLKNSKAPGKDLITNQLI 509
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 32.3 bits (70), Expect = 0.78
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -2
Query: 658 PITTDEVRDAIHNLQPRKAPGSDGIHNRAL 569
PIT E+ D I NL+ KAPG D I N+ +
Sbjct: 480 PITLKELNDEIKNLKNSKAPGKDLITNQLI 509
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 32.3 bits (70), Expect = 0.78
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -2
Query: 658 PITTDEVRDAIHNLQPRKAPGSDGIHNRAL 569
PIT E+ D I NL+ KAPG D I N+ +
Sbjct: 442 PITLKELNDEIKNLKNSKAPGKDLITNQLI 471
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 32.3 bits (70), Expect = 0.78
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -2
Query: 658 PITTDEVRDAIHNLQPRKAPGSDGIHNRAL 569
PIT E+ D I NL+ KAPG D I N+ +
Sbjct: 480 PITLKELNDEIKNLKNSKAPGKDLITNQLI 509
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 32.3 bits (70), Expect = 0.78
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = -2
Query: 682 PAALDALPPITTDEVRDAIHNLQPRKAPGSDGI 584
P A D P IT+ EV +A ++P KAPG DGI
Sbjct: 394 PPASD-FPCITSCEVVEAAKRIRPNKAPGIDGI 425
>BT029263-1|ABK30900.1| 495|Drosophila melanogaster IP03351p
protein.
Length = 495
Score = 31.9 bits (69), Expect = 1.0
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Frame = -3
Query: 411 PSHRSRWKLHTRPSRPNGKPSTSPKARHYG----SS*SINGAFRHHKHRSPS 268
PS S+ + + PSR +G +SP+ R +G SS F HH RSPS
Sbjct: 77 PSISSQSSVDSAPSRHSGHRGSSPQIRTFGPDGRSSLPSEPGFPHHLARSPS 128
>AE014296-2454|AAF49683.1| 602|Drosophila melanogaster CG3020-PA
protein.
Length = 602
Score = 31.9 bits (69), Expect = 1.0
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Frame = -3
Query: 411 PSHRSRWKLHTRPSRPNGKPSTSPKARHYG----SS*SINGAFRHHKHRSPS 268
PS S+ + + PSR +G +SP+ R +G SS F HH RSPS
Sbjct: 184 PSISSQSSVDSAPSRHSGHRGSSPQIRTFGPDGRSSLPSEPGFPHHLARSPS 235
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 31.5 bits (68), Expect = 1.4
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -2
Query: 658 PITTDEVRDAIHNLQPRKAPGSDGIHNRAL 569
PIT +E+ + I NL+ KAPG D I N+ +
Sbjct: 492 PITLNELNEEIKNLKNSKAPGKDLITNQLI 521
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 31.5 bits (68), Expect = 1.4
Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Frame = -2
Query: 667 ALPP--ITTDEVRDAIHNLQPRKAPGSDGIHNRAL 569
+LPP +T +EV++ I L +KAPG D + NR +
Sbjct: 234 SLPPSAVTLEEVKNLIAKLPLKKAPGEDLLDNRTI 268
Score = 30.7 bits (66), Expect = 2.4
Identities = 21/87 (24%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Frame = -1
Query: 569 LQVIQSRFCRIAVGAPWFLRNVXXXXXXXXXXXSKYLQSASLRHFEKAARHENPLIVAAG 390
++++Q++ R GAPW++R LQ+ + ++ E+ H N L G
Sbjct: 628 IRILQAKTLRRISGAPWYMRTRDIERDLKVPKLGDKLQNIAQKYLERLNVHPNSLARKLG 687
Query: 389 NYIPDPVD-RMVNRRRRPKHVITDPPD 312
D R +RR +H D P+
Sbjct: 688 TAAVVNADPRTRVKRRLKRHHPHDLPN 714
>BT022200-1|AAY51594.1| 751|Drosophila melanogaster IP01101p
protein.
Length = 751
Score = 31.1 bits (67), Expect = 1.8
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = -3
Query: 294 RHHKHRSPSSSNPSLATKGSTSELTHRHSPLSFSPDLLSGS 172
+H +H + SSS+P LAT G S T + ++ L+SGS
Sbjct: 382 QHLQHNNSSSSSPKLATPGDNSGNTSSYQQ-QYASQLVSGS 421
>AY574373-1|AAS87366.1| 595|Drosophila melanogaster transcription
factor kay-beta protein.
Length = 595
Score = 31.1 bits (67), Expect = 1.8
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -3
Query: 306 NGAFRHHKHRSPSSSNPSLATKGSTSELTHR-HSPLSFSP 190
+GA HH H S SSN ++ +T T R +SPL P
Sbjct: 355 SGASSHHNHNSNDSSNGTITGMDATLNSTGRSNSPLDLKP 394
>AY069805-1|AAL39950.1| 546|Drosophila melanogaster SD04477p
protein.
Length = 546
Score = 31.1 bits (67), Expect = 1.8
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -3
Query: 306 NGAFRHHKHRSPSSSNPSLATKGSTSELTHR-HSPLSFSP 190
+GA HH H S SSN ++ +T T R +SPL P
Sbjct: 306 SGASSHHNHNSNDSSNGTITGMDATLNSTGRSNSPLDLKP 345
>AF238310-1|AAF69496.1| 595|Drosophila melanogaster Fos-related
antigen protein.
Length = 595
Score = 31.1 bits (67), Expect = 1.8
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -3
Query: 306 NGAFRHHKHRSPSSSNPSLATKGSTSELTHR-HSPLSFSP 190
+GA HH H S SSN ++ +T T R +SPL P
Sbjct: 355 SGASSHHNHNSNDSSNGTITGMDATLNSTGRSNSPLDLKP 394
>AE014297-4439|AAZ83994.1| 617|Drosophila melanogaster CG33956-PE,
isoform E protein.
Length = 617
Score = 31.1 bits (67), Expect = 1.8
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -3
Query: 306 NGAFRHHKHRSPSSSNPSLATKGSTSELTHR-HSPLSFSP 190
+GA HH H S SSN ++ +T T R +SPL P
Sbjct: 377 SGASSHHNHNSNDSSNGTITGMDATLNSTGRSNSPLDLKP 416
>AE014297-4438|AAZ83993.1| 546|Drosophila melanogaster CG33956-PB,
isoform B protein.
Length = 546
Score = 31.1 bits (67), Expect = 1.8
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -3
Query: 306 NGAFRHHKHRSPSSSNPSLATKGSTSELTHR-HSPLSFSP 190
+GA HH H S SSN ++ +T T R +SPL P
Sbjct: 306 SGASSHHNHNSNDSSNGTITGMDATLNSTGRSNSPLDLKP 345
>AE014297-4436|AAZ83992.1| 595|Drosophila melanogaster CG33956-PA,
isoform A protein.
Length = 595
Score = 31.1 bits (67), Expect = 1.8
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -3
Query: 306 NGAFRHHKHRSPSSSNPSLATKGSTSELTHR-HSPLSFSP 190
+GA HH H S SSN ++ +T T R +SPL P
Sbjct: 355 SGASSHHNHNSNDSSNGTITGMDATLNSTGRSNSPLDLKP 394
>AE014297-4435|AAZ83991.1| 722|Drosophila melanogaster CG33956-PD,
isoform D protein.
Length = 722
Score = 31.1 bits (67), Expect = 1.8
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -3
Query: 306 NGAFRHHKHRSPSSSNPSLATKGSTSELTHR-HSPLSFSP 190
+GA HH H S SSN ++ +T T R +SPL P
Sbjct: 482 SGASSHHNHNSNDSSNGTITGMDATLNSTGRSNSPLDLKP 521
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 30.7 bits (66), Expect = 2.4
Identities = 21/87 (24%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Frame = -1
Query: 569 LQVIQSRFCRIAVGAPWFLRNVXXXXXXXXXXXSKYLQSASLRHFEKAARHENPLIVAAG 390
++++Q++ R GAPW++R LQ+ + ++ E+ H N L G
Sbjct: 826 IRILQAKTLRRISGAPWYMRTRDIERDLKVPKLGDKLQNIAQKYMERLNVHPNSLARKLG 885
Query: 389 NYIPDPVD-RMVNRRRRPKHVITDPPD 312
D R +RR +H D P+
Sbjct: 886 TAAVVNADPRTRVKRRLKRHHPHDLPN 912
Score = 29.9 bits (64), Expect = 4.1
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -2
Query: 664 LPPITTDEVRDAIHNLQPRKAPGSDGIHNRAL 569
L +T +EV++ I L +KAPG D + NR +
Sbjct: 435 LSAVTLEEVKNLIAKLPLKKAPGEDLLDNRTI 466
>U75467-1|AAB18341.1| 724|Drosophila melanogaster Atu protein.
Length = 724
Score = 29.9 bits (64), Expect = 4.1
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Frame = -3
Query: 432 EGGTT*EP-SHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNP 256
+ GT P SHRS + P + S SP++R GS+ S H + + S
Sbjct: 100 KSGTPESPQSHRSGSLQSRKSGSPQSRRSGSPQSRKSGSTHSRRSGSAHSRRSGSARSRK 159
Query: 255 SLATKGSTSELTHR-HS 208
S + + SE R HS
Sbjct: 160 SGSAQSDRSESRSRSHS 176
>BT024212-1|ABC86274.1| 1085|Drosophila melanogaster RE28791p protein.
Length = 1085
Score = 29.9 bits (64), Expect = 4.1
Identities = 41/145 (28%), Positives = 55/145 (37%), Gaps = 6/145 (4%)
Frame = -3
Query: 606 RHQAPTASTTARSSGYSITILQDSRRSAMVP*ECGSPR*---PGAR-LS**VSTVGIAAP 439
R P++ + RS SI+ + RR + SPR P R +S +G A
Sbjct: 883 RSPPPSSGSRRRSRSRSISRSRARRRGSRTKSRTPSPRRRRLPSPRRVSRYAKRIGGGAV 942
Query: 438 F*EGGTT*EPSH-RSRWKLHTRPSRPNGKPSTSPKA-RHYGSS*SINGAFRHHKHRSPSS 265
GGT SH RS + TR P+ + P R GS I + PS
Sbjct: 943 ---GGTRKGRSHSRSLTRSRTRSRSPSRRRRLPPAGHRKRGSISPIPQKLAGPRSPPPSR 999
Query: 264 SNPSLATKGSTSELTHRHSPLSFSP 190
SL+ L+ SPL F P
Sbjct: 1000 RRQSLSRDREREHLSRSRSPLPFKP 1024
>AY075403-1|AAL68232.1| 725|Drosophila melanogaster LD30655p
protein.
Length = 725
Score = 29.9 bits (64), Expect = 4.1
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Frame = -3
Query: 432 EGGTT*EP-SHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNP 256
+ GT P SHRS + P + S SP++R GS+ S H + + S
Sbjct: 101 KSGTPESPQSHRSGSLQSRKSGSPQSRRSGSPQSRKSGSTHSRRSGSAHSRRSGSARSRK 160
Query: 255 SLATKGSTSELTHR-HS 208
S + + SE R HS
Sbjct: 161 SGSAQSDRSESRSRSHS 177
>AE014297-303|AAF51991.1| 725|Drosophila melanogaster CG1433-PA
protein.
Length = 725
Score = 29.9 bits (64), Expect = 4.1
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Frame = -3
Query: 432 EGGTT*EP-SHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNP 256
+ GT P SHRS + P + S SP++R GS+ S H + + S
Sbjct: 101 KSGTPESPQSHRSGSLQSRKSGSPQSRRSGSPQSRKSGSTHSRRSGSAHSRRSGSARSRK 160
Query: 255 SLATKGSTSELTHR-HS 208
S + + SE R HS
Sbjct: 161 SGSAQSDRSESRSRSHS 177
>AE014296-973|AAF50767.2| 1929|Drosophila melanogaster CG5146-PA
protein.
Length = 1929
Score = 29.9 bits (64), Expect = 4.1
Identities = 41/145 (28%), Positives = 55/145 (37%), Gaps = 6/145 (4%)
Frame = -3
Query: 606 RHQAPTASTTARSSGYSITILQDSRRSAMVP*ECGSPR*---PGAR-LS**VSTVGIAAP 439
R P++ + RS SI+ + RR + SPR P R +S +G A
Sbjct: 1251 RSPPPSSGSRRRSRSRSISRSRARRRGSRTKSRTPSPRRRRLPSPRRVSRYAKRIGGGAV 1310
Query: 438 F*EGGTT*EPSH-RSRWKLHTRPSRPNGKPSTSPKA-RHYGSS*SINGAFRHHKHRSPSS 265
GGT SH RS + TR P+ + P R GS I + PS
Sbjct: 1311 ---GGTRKGRSHSRSLTRSRTRSRSPSRRRRLPPAGHRKRGSISPIPQKLAGPRSPPPSR 1367
Query: 264 SNPSLATKGSTSELTHRHSPLSFSP 190
SL+ L+ SPL F P
Sbjct: 1368 RRQSLSRDREREHLSRSRSPLPFKP 1392
>AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends long
isoform protein.
Length = 5554
Score = 29.5 bits (63), Expect = 5.5
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -3
Query: 363 NGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSELTHRHS 208
NG P+ + RH S + R H RSPSS + S ++ S+ +H H+
Sbjct: 417 NGVPTHPIRTRHNLHGRSTTSSSRSHS-RSPSSYSSSHSSSSSSHSSSHSHA 467
>AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP motif
protein long isoformprotein.
Length = 5533
Score = 29.5 bits (63), Expect = 5.5
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -3
Query: 363 NGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSELTHRHS 208
NG P+ + RH S + R H RSPSS + S ++ S+ +H H+
Sbjct: 423 NGVPTHPIRTRHNLHGRSTTSSSRSHS-RSPSSYSSSHSSSSSSHSSSHSHA 473
>AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends
protein.
Length = 5476
Score = 29.5 bits (63), Expect = 5.5
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -3
Query: 363 NGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSELTHRHS 208
NG P+ + RH S + R H RSPSS + S ++ S+ +H H+
Sbjct: 366 NGVPTHPIRTRHNLHGRSTTSSSRSHS-RSPSSYSSSHSSSSSSHSSSHSHA 416
>AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,
isoform C protein.
Length = 5476
Score = 29.5 bits (63), Expect = 5.5
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -3
Query: 363 NGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSELTHRHS 208
NG P+ + RH S + R H RSPSS + S ++ S+ +H H+
Sbjct: 366 NGVPTHPIRTRHNLHGRSTTSSSRSHS-RSPSSYSSSHSSSSSSHSSSHSHA 416
>AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,
isoform B protein.
Length = 5533
Score = 29.5 bits (63), Expect = 5.5
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -3
Query: 363 NGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSELTHRHS 208
NG P+ + RH S + R H RSPSS + S ++ S+ +H H+
Sbjct: 423 NGVPTHPIRTRHNLHGRSTTSSSRSHS-RSPSSYSSSHSSSSSSHSSSHSHA 473
>AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,
isoform A protein.
Length = 5560
Score = 29.5 bits (63), Expect = 5.5
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -3
Query: 363 NGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSELTHRHS 208
NG P+ + RH S + R H RSPSS + S ++ S+ +H H+
Sbjct: 423 NGVPTHPIRTRHNLHGRSTTSSSRSHS-RSPSSYSSSHSSSSSSHSSSHSHA 473
>U88578-1|AAD09632.1| 2222|Drosophila melanogaster sdk protein.
Length = 2222
Score = 29.1 bits (62), Expect = 7.2
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -3
Query: 267 SSNPSLATKG-STSELTHRHSPLSFSPDLLSGSRFRXRW*ILRST 136
SS PS ATK T + +H P + + +S + R RW L+ T
Sbjct: 1148 SSKPSEATKDFQTIQARPKHPPFNVTERAMSAQQLRVRWIPLQQT 1192
>BT029031-1|ABJ16964.1| 184|Drosophila melanogaster IP02265p
protein.
Length = 184
Score = 29.1 bits (62), Expect = 7.2
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 413 SHVVPPSQNGAAMPTVDTY*ESRAPGHRGDPHS 511
SH+V P A P V +Y RAPGH H+
Sbjct: 18 SHLVTPEPKVPASPYVFSYQAGRAPGHVDRQHT 50
>AY128500-1|AAM75093.1| 513|Drosophila melanogaster RH70372p
protein.
Length = 513
Score = 29.1 bits (62), Expect = 7.2
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = -3
Query: 408 SHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTS 229
SHR R + R R + + R SS +G RHH H + SSS + A ++
Sbjct: 157 SHRERERDRDR-ERERDRDKDRDRRRSEKSSRHHSGKERHHHHHNNSSSAAAAAVSAASV 215
Query: 228 ELTH 217
+H
Sbjct: 216 RRSH 219
>AY051612-1|AAK93036.1| 513|Drosophila melanogaster GH25653p
protein.
Length = 513
Score = 29.1 bits (62), Expect = 7.2
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = -3
Query: 408 SHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTS 229
SHR R + R R + + R SS +G RHH H + SSS + A ++
Sbjct: 157 SHRERERDRDR-ERERDRDKDRDRRRSEKSSRHHSGKERHHHHHNNSSSAAAAAVSAASV 215
Query: 228 ELTH 217
+H
Sbjct: 216 RRSH 219
>AY047580-1|AAK77312.1| 184|Drosophila melanogaster GH09112p
protein.
Length = 184
Score = 29.1 bits (62), Expect = 7.2
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 413 SHVVPPSQNGAAMPTVDTY*ESRAPGHRGDPHS 511
SH+V P A P V +Y RAPGH H+
Sbjct: 18 SHLVTPEPKVPASPYVFSYQAGRAPGHVDRQHT 50
>AE014298-2165|AAN09356.1| 426|Drosophila melanogaster CG6340-PD,
isoform D protein.
Length = 426
Score = 29.1 bits (62), Expect = 7.2
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = -3
Query: 408 SHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTS 229
SHR R + R R + + R SS +G RHH H + SSS + A ++
Sbjct: 70 SHRERERDRDR-ERERDRDKDRDRRRSEKSSRHHSGKERHHHHHNNSSSAAAAAVSAASV 128
Query: 228 ELTH 217
+H
Sbjct: 129 RRSH 132
>AE014298-2162|AAF48464.1| 513|Drosophila melanogaster CG6340-PB,
isoform B protein.
Length = 513
Score = 29.1 bits (62), Expect = 7.2
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = -3
Query: 408 SHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTS 229
SHR R + R R + + R SS +G RHH H + SSS + A ++
Sbjct: 157 SHRERERDRDR-ERERDRDKDRDRRRSEKSSRHHSGKERHHHHHNNSSSAAAAAVSAASV 215
Query: 228 ELTH 217
+H
Sbjct: 216 RRSH 219
>AE013599-3027|AAF57459.1| 184|Drosophila melanogaster CG18066-PA
protein.
Length = 184
Score = 29.1 bits (62), Expect = 7.2
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 413 SHVVPPSQNGAAMPTVDTY*ESRAPGHRGDPHS 511
SH+V P A P V +Y RAPGH H+
Sbjct: 18 SHLVTPEPKVPASPYVFSYQAGRAPGHVDRQHT 50
>BT023770-1|AAZ41778.1| 931|Drosophila melanogaster LP23752p
protein.
Length = 931
Score = 28.7 bits (61), Expect = 9.6
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = -3
Query: 378 RPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSEL 223
+P P+ PSTS A H G+ + + +SP+S NPS +T+EL
Sbjct: 703 KPRAPSWAPSTSGAAGH--------GSIQLSEFQSPTSPNPSETGTATTAEL 746
>AY195738-1|AAO43730.1| 917|Drosophila melanogaster kekkon5
precursor protein.
Length = 917
Score = 28.7 bits (61), Expect = 9.6
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = -3
Query: 378 RPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSEL 223
+P P+ PSTS A H G+ + + +SP+S NPS +T+EL
Sbjct: 689 KPRAPSWAPSTSGAAGH--------GSIQLSEFQSPTSPNPSETGTATTAEL 732
>AY069803-1|AAL39948.1| 856|Drosophila melanogaster SD04280p
protein.
Length = 856
Score = 28.7 bits (61), Expect = 9.6
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Frame = -3
Query: 288 HKHRSPSSSNPSLATKGSTS--ELTHRHSPLSFSPDL-LSGSR 169
+K S SSS+PSLA +TS ++ ++SP ++ P+ LS SR
Sbjct: 230 NKRLSSSSSSPSLARLVATSGLDIYEKYSPANYKPNCELSRSR 272
>AL132792-1|CAB65848.1| 2224|Drosophila melanogaster
EG:BACR19J1.1,FBgn0021764;sdk protein.
Length = 2224
Score = 28.7 bits (61), Expect = 9.6
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -3
Query: 267 SSNPSLATKG-STSELTHRHSPLSFSPDLLSGSRFRXRW*ILRST 136
SS PS ATK T + +H P + + +S + R RW L+ T
Sbjct: 1149 SSKPSEATKDFQTIQARPKHPPFNVTVRAMSAQQLRVRWIPLQQT 1193
>AL031583-10|CAA20900.1| 504|Drosophila melanogaster EG:34F3.1
protein.
Length = 504
Score = 28.7 bits (61), Expect = 9.6
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = -3
Query: 291 HHKHRSPSSSNPSLATKGSTSELTHR-HSPLSFSPDLLSGS 172
HH H S S+ N +T GS S + + S SP SGS
Sbjct: 436 HHSHNSSSTDNTETSTSGSASSPSKSLKTSSSLSPAKRSGS 476
>AE014298-3176|AAN09565.1| 856|Drosophila melanogaster CG14619-PE,
isoform E protein.
Length = 856
Score = 28.7 bits (61), Expect = 9.6
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Frame = -3
Query: 288 HKHRSPSSSNPSLATKGSTS--ELTHRHSPLSFSPDL-LSGSR 169
+K S SSS+PSLA +TS ++ ++SP ++ P+ LS SR
Sbjct: 230 NKRLSSSSSSPSLARLVATSGLDIYEKYSPANYKPNCELSRSR 272
>AE014298-3175|AAN09564.1| 856|Drosophila melanogaster CG14619-PD,
isoform D protein.
Length = 856
Score = 28.7 bits (61), Expect = 9.6
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Frame = -3
Query: 288 HKHRSPSSSNPSLATKGSTS--ELTHRHSPLSFSPDL-LSGSR 169
+K S SSS+PSLA +TS ++ ++SP ++ P+ LS SR
Sbjct: 230 NKRLSSSSSSPSLARLVATSGLDIYEKYSPANYKPNCELSRSR 272
>AE014298-3174|AAF50952.2| 856|Drosophila melanogaster CG14619-PA,
isoform A protein.
Length = 856
Score = 28.7 bits (61), Expect = 9.6
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Frame = -3
Query: 288 HKHRSPSSSNPSLATKGSTS--ELTHRHSPLSFSPDL-LSGSR 169
+K S SSS+PSLA +TS ++ ++SP ++ P+ LS SR
Sbjct: 230 NKRLSSSSSSPSLARLVATSGLDIYEKYSPANYKPNCELSRSR 272
>AE014298-2840|AAN09488.1| 931|Drosophila melanogaster CG12199-PB,
isoform B protein.
Length = 931
Score = 28.7 bits (61), Expect = 9.6
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = -3
Query: 378 RPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSEL 223
+P P+ PSTS A H G+ + + +SP+S NPS +T+EL
Sbjct: 703 KPRAPSWAPSTSGAAGH--------GSIQLSEFQSPTSPNPSETGTATTAEL 746
>AE014298-2839|AAF48953.2| 931|Drosophila melanogaster CG12199-PA,
isoform A protein.
Length = 931
Score = 28.7 bits (61), Expect = 9.6
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = -3
Query: 378 RPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSEL 223
+P P+ PSTS A H G+ + + +SP+S NPS +T+EL
Sbjct: 703 KPRAPSWAPSTSGAAGH--------GSIQLSEFQSPTSPNPSETGTATTAEL 746
>AE014298-113|AAF45555.2| 1561|Drosophila melanogaster CG12467-PA
protein.
Length = 1561
Score = 28.7 bits (61), Expect = 9.6
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = -3
Query: 291 HHKHRSPSSSNPSLATKGSTSELTHR-HSPLSFSPDLLSGS 172
HH H S S+ N +T GS S + + S SP SGS
Sbjct: 475 HHSHNSSSTDNTETSTSGSASSPSKSLKTSSSLSPAKRSGS 515
>AE014298-97|AAN09029.4| 2224|Drosophila melanogaster CG5227-PD,
isoform D protein.
Length = 2224
Score = 28.7 bits (61), Expect = 9.6
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -3
Query: 267 SSNPSLATKG-STSELTHRHSPLSFSPDLLSGSRFRXRW*ILRST 136
SS PS ATK T + +H P + + +S + R RW L+ T
Sbjct: 1149 SSKPSEATKDFQTIQARPKHPPFNVTVRAMSAQQLRVRWIPLQQT 1193
>AE014298-96|AAF45541.5| 2224|Drosophila melanogaster CG5227-PB,
isoform B protein.
Length = 2224
Score = 28.7 bits (61), Expect = 9.6
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -3
Query: 267 SSNPSLATKG-STSELTHRHSPLSFSPDLLSGSRFRXRW*ILRST 136
SS PS ATK T + +H P + + +S + R RW L+ T
Sbjct: 1149 SSKPSEATKDFQTIQARPKHPPFNVTVRAMSAQQLRVRWIPLQQT 1193
>AE014298-95|AAN09027.4| 2224|Drosophila melanogaster CG5227-PA,
isoform A protein.
Length = 2224
Score = 28.7 bits (61), Expect = 9.6
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -3
Query: 267 SSNPSLATKG-STSELTHRHSPLSFSPDLLSGSRFRXRW*ILRST 136
SS PS ATK T + +H P + + +S + R RW L+ T
Sbjct: 1149 SSKPSEATKDFQTIQARPKHPPFNVTVRAMSAQQLRVRWIPLQQT 1193
>AE014298-94|AAN09028.5| 2232|Drosophila melanogaster CG5227-PC,
isoform C protein.
Length = 2232
Score = 28.7 bits (61), Expect = 9.6
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -3
Query: 267 SSNPSLATKG-STSELTHRHSPLSFSPDLLSGSRFRXRW*ILRST 136
SS PS ATK T + +H P + + +S + R RW L+ T
Sbjct: 1149 SSKPSEATKDFQTIQARPKHPPFNVTVRAMSAQQLRVRWIPLQQT 1193
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,696,806
Number of Sequences: 53049
Number of extensions: 752616
Number of successful extensions: 2685
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 2362
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2622
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3654740856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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