Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP05_T7_L23
         (788 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL031630-13|CAA20992.1|  814|Caenorhabditis elegans Hypothetical...    29   2.9  
AC024848-4|AAK68543.2| 1020|Caenorhabditis elegans Hypothetical ...    29   3.8  
AF016663-5|AAC70880.1|  864|Caenorhabditis elegans Hypothetical ...    29   5.0  

>AL031630-13|CAA20992.1|  814|Caenorhabditis elegans Hypothetical
           protein Y38H6C.14 protein.
          Length = 814

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 15/57 (26%), Positives = 23/57 (40%)
 Frame = -3

Query: 744 QHXHGTPTHRVSRQEVERRAXXXXXXXXXXXXLTKLETRSTTSNLGRHQAPTASTTA 574
           Q  H TP+H++ R +  R               T    R  TS+  RH +   +T+A
Sbjct: 199 QQVHATPSHQIPRHQSSRTHQNSRQQVPSATSSTLQNPRHRTSSASRHHSTRNATSA 255


>AC024848-4|AAK68543.2| 1020|Caenorhabditis elegans Hypothetical
            protein Y67D8A.1 protein.
          Length = 1020

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 19/63 (30%), Positives = 29/63 (46%)
 Frame = -3

Query: 360  GKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSELTHRHSPLSFSPDLL 181
            G+ S+  K RH G S S   +  HH H+   +    LAT  +    +   +P + +P  L
Sbjct: 944  GRASSEKKKRHVGGSSS--SSQHHHHHQQQQTPLLRLATPLTPEPSSGTVTPRAITPSPL 1001

Query: 180  SGS 172
            S S
Sbjct: 1002 SSS 1004


>AF016663-5|AAC70880.1|  864|Caenorhabditis elegans Hypothetical
           protein F21E9.5 protein.
          Length = 864

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -2

Query: 682 PAALDALPPITTDEVRDAIHNLQPRKAPGSDGI 584
           P   + LPP    E+R AI++    KA GSD I
Sbjct: 387 PIMAEPLPPFLFGEIRAAINSFPNGKAAGSDKI 419


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,284,216
Number of Sequences: 27780
Number of extensions: 342498
Number of successful extensions: 1041
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 969
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1040
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)