Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP05_T7_L22
(789 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0175 + 22966151-22967614 38 0.012
01_06_0381 + 28878811-28879120,28880189-28880331,28880753-288815... 32 0.60
10_08_0793 - 20614583-20614897,20615417-20615660,20617713-206178... 31 0.79
05_05_0227 - 23449579-23450459,23450574-23450691 31 1.0
03_05_1101 - 30408944-30410410 31 1.0
01_07_0213 - 42028941-42029055,42029444-42029480,42029876-420302... 31 1.0
03_06_0180 + 32175658-32178145,32178765-32178808 30 1.8
01_06_0140 - 26881282-26881290,26882027-26882128,26882816-268829... 30 2.4
01_06_0292 + 28243408-28243543,28243631-28243760,28243860-28244550 29 3.2
11_01_0044 + 340486-340854,341855-341911,343100-343974,344065-34... 29 4.2
07_03_0471 + 18501496-18502104,18503009-18503260,18503367-185035... 29 4.2
03_06_0595 - 34955345-34955464,34955495-34956256,34956384-349565... 29 4.2
11_05_0086 + 18964493-18965737,18965896-18966360 29 5.6
08_02_0707 - 20212190-20214592 29 5.6
05_07_0200 - 28368890-28369021,28369169-28369303,28369918-283699... 29 5.6
02_01_0759 - 5628913-5630870,5631023-5631047 29 5.6
01_01_0140 + 1265785-1265902,1266424-1266845 29 5.6
02_05_0482 + 29382696-29383251,29383376-29383692 28 7.4
09_06_0239 - 21794691-21795986 28 9.7
06_03_0913 + 25913231-25913609,25913702-25913775,25914400-259145... 28 9.7
05_05_0392 + 24629528-24630442 28 9.7
04_01_0535 + 6964311-6964685 28 9.7
03_04_0023 + 16537257-16537272,16537515-16537929,16538404-165384... 28 9.7
02_01_0624 - 4681834-4682298,4684250-4684398,4684479-4684557,468... 28 9.7
>05_05_0175 + 22966151-22967614
Length = 487
Score = 37.5 bits (83), Expect = 0.012
Identities = 29/74 (39%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Frame = +2
Query: 155 P*RKC---SRSAGAPISAVRAGGVISSFGGPVGRPPL-PSRRSARFSRTGWAATAEVSPP 322
P R C S +AG P SA R GG S G P PPL P R FS W ++ V
Sbjct: 75 PRRSCCGSSSAAGTPRSAARCGGG-GSPGAPPSSPPLSPQRTHVPFS---WESSPGVPKD 130
Query: 323 ATCADS--QDILPP 358
A C +++LPP
Sbjct: 131 AACGRKVVREVLPP 144
>01_06_0381 +
28878811-28879120,28880189-28880331,28880753-28881532,
28882568-28883968
Length = 877
Score = 31.9 bits (69), Expect = 0.60
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +2
Query: 449 TEEANREHLSSTHKHALHRKNLHPPAEPEHRRIARHERTGR 571
+ E EH SS +H HR + H + EHR RH+R R
Sbjct: 778 SSEDEHEHRSSKSRHR-HRDDYHYHEDDEHRSSHRHQRDHR 817
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/52 (36%), Positives = 23/52 (44%)
Frame = +2
Query: 389 SHHANYNFTGSTSLTRCYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRR 544
S NY+ S +R H E +R H S HKH L R + EP H R
Sbjct: 725 SDEENYDSEESYKHSR-KKHRSEDSRAHTSDVHKHKLKRHS--KDLEPRHHR 773
>10_08_0793 -
20614583-20614897,20615417-20615660,20617713-20617899,
20618508-20618547,20618699-20618775,20618965-20619091
Length = 329
Score = 31.5 bits (68), Expect = 0.79
Identities = 27/86 (31%), Positives = 35/86 (40%)
Frame = +2
Query: 362 KLLTATNLTSHHANYNFTGSTSLTRCYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHR 541
++ T L HH N RC+S ++ A L H H ++ L P E E R
Sbjct: 98 QIWTDMQLQDHHHECN----GPYCRCHSSSKHAKGSLLLLHHHH--QQQQLQRPNEMETR 151
Query: 542 RIARHERTGRLILQVTTTSDVSIFLP 619
R +TG L Q DVS LP
Sbjct: 152 RAEASTQTGFLRSQGICERDVSSGLP 177
>05_05_0227 - 23449579-23450459,23450574-23450691
Length = 332
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = -1
Query: 267 RLDGNGGRPTGPPNDEITPPARTADIGAP 181
R DG GGRP+ P E T P R GAP
Sbjct: 231 RGDGGGGRPSAPARREGTDPCRPVLGGAP 259
>03_05_1101 - 30408944-30410410
Length = 488
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -3
Query: 193 YWSPRAPTALSLGCAAS*ETVLWQVQPETST 101
Y+SPR L+LG AS LW ++PE S+
Sbjct: 294 YFSPRQVRELALGLEASNHPFLWVIRPEDSS 324
>01_07_0213 -
42028941-42029055,42029444-42029480,42029876-42030244,
42030332-42031201,42051574-42052891
Length = 902
Score = 31.1 bits (67), Expect = 1.0
Identities = 25/72 (34%), Positives = 34/72 (47%)
Frame = +2
Query: 260 SRRSARFSRTGWAATAEVSPPATCADSQDILPPCKLLTATNLTSHHANYNFTGSTSLTRC 439
+RR R TG A+ S PAT + + P +LLT+ TSH + N T S
Sbjct: 671 ARRRERQQLTGSAS----SSPATASAAAASKKP-RLLTSQTTTSHTSTSNATTPRSFDTT 725
Query: 440 YSHTEEANREHL 475
SH + + RE L
Sbjct: 726 SSHQDASFRESL 737
>03_06_0180 + 32175658-32178145,32178765-32178808
Length = 843
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 241 RPASVTVEAICPVLADWVGRDRGSLTSGYLCRLTRHLTTMQTS 369
RP SVT+ ++ P L D G ++G GY+ R H+ S
Sbjct: 345 RPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVS 387
>01_06_0140 -
26881282-26881290,26882027-26882128,26882816-26882924,
26883712-26883860,26883941-26884043,26884635-26884810,
26885004-26885066,26885258-26885346,26885428-26885538,
26885610-26885744,26886415-26886580,26886788-26886856,
26886943-26887230,26888612-26888866
Length = 607
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = -1
Query: 576 IRRPVRSCLAMRRCSGSAGGCRFFR*SACLCVLDKCSRLASSV 448
+R R A R C GSAG R R SA V+ + RL + V
Sbjct: 31 LRPAARLSFAPRWCGGSAGAARARRESAVTSVISRAPRLDAEV 73
>01_06_0292 + 28243408-28243543,28243631-28243760,28243860-28244550
Length = 318
Score = 29.5 bits (63), Expect = 3.2
Identities = 21/61 (34%), Positives = 28/61 (45%)
Frame = +2
Query: 152 AP*RKCSRSAGAPISAVRAGGVISSFGGPVGRPPLPSRRSARFSRTGWAATAEVSPPATC 331
AP +C+ +P SA +GG SFG P PS + A + T A A + AT
Sbjct: 157 APQSQCASMQPSPASASSSGGDACSFGAAAMYSPSPSTQQAPQAAT--LAVAGYTSVATA 214
Query: 332 A 334
A
Sbjct: 215 A 215
>11_01_0044 +
340486-340854,341855-341911,343100-343974,344065-344398,
345553-345645,345913-346062
Length = 625
Score = 29.1 bits (62), Expect = 4.2
Identities = 21/71 (29%), Positives = 29/71 (40%)
Frame = +2
Query: 221 SSFGGPVGRPPLPSRRSARFSRTGWAATAEVSPPATCADSQDILPPCKLLTATNLTSHHA 400
S FG + P RR F+RTGW A A V P + L+ T L +
Sbjct: 419 SFFGRLLSALPDFLRRKVSFARTGWLAAALVPMPMAFFLMWKLHDVNTLVAGTALIGLSS 478
Query: 401 NYNFTGSTSLT 433
+ F + S+T
Sbjct: 479 GFIFAAAVSVT 489
>07_03_0471 + 18501496-18502104,18503009-18503260,18503367-18503537,
18503693-18503743,18503868-18503960,18504125-18504220,
18504318-18504368,18504452-18504570,18504909-18505017,
18505391-18505513,18505590-18505661,18505963-18506034,
18506125-18506191,18506260-18506402,18506494-18506565,
18506632-18506760,18507317-18507472,18507579-18507692,
18507791-18507889,18507974-18508051,18508402-18508536,
18509081-18509155,18509247-18509361,18509458-18509828,
18509903-18509965,18510049-18510120,18510285-18510413,
18510512-18510628,18510902-18511018
Length = 1289
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = -1
Query: 321 GGETSAVAAHPVRENRADRLDGNGGRPTGPPNDEITPPARTADIGAPALRLHF 163
G A +PV + R+ R G+ P GPPN P + G P R+ F
Sbjct: 980 GASFGAAGTNPVADKRSGRGKGHSFVPFGPPNGAHKPGVHPS--GYPLPRMPF 1030
>03_06_0595 -
34955345-34955464,34955495-34956256,34956384-34956507,
34957111-34957167,34958222-34958366,34958860-34958909,
34959366-34959514,34959955-34960146
Length = 532
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +2
Query: 221 SSFGGPVGRPPLPSRRSARFSRTGWAATAEVSPPATCADSQD--ILPPCKLLTATNL 385
+S P+ PP+PS ++A + + + A + PP T Q + P L TA+++
Sbjct: 391 TSLANPLFFPPMPSLQTASHAASSLCSAAPLHPPITVQQLQSAPLHQPFSLPTASSI 447
>11_05_0086 + 18964493-18965737,18965896-18966360
Length = 569
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = -1
Query: 237 GPPNDEITPPARTADIGAPALRLHFR*GAPPRRRL 133
GPP D PP T + A L H R PP R L
Sbjct: 82 GPPPDPNQPPPFTNVVSAALLARHRRAAVPPLRAL 116
>08_02_0707 - 20212190-20214592
Length = 800
Score = 28.7 bits (61), Expect = 5.6
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +2
Query: 389 SHHANYNFTGSTSLTRCYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRRIARH 556
SHH +++ S + S TE + +E+ S H H H + H +E H++ H
Sbjct: 549 SHHHDHHHDSSNEESHHNSLTENSCKENHSHCHGHDHHHHHHHDHSE-HHQQSGDH 603
>05_07_0200 -
28368890-28369021,28369169-28369303,28369918-28369947,
28370019-28370093,28370222-28370333,28370440-28370621,
28370723-28370854,28372193-28373479
Length = 694
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +2
Query: 221 SSFGGPVGRPPLPSRRSARFSRTGWAATAEVSPPAT 328
S GP PP P + R SRT AT S PA+
Sbjct: 334 SGSAGPPAPPPPPPPAAKRTSRTSTPATTSSSAPAS 369
>02_01_0759 - 5628913-5630870,5631023-5631047
Length = 660
Score = 28.7 bits (61), Expect = 5.6
Identities = 19/51 (37%), Positives = 23/51 (45%)
Frame = -2
Query: 290 QSARTGQIASTVTEAGRRVRQTTRSRLQHGLPILEPPRSDCTFARVRRLVG 138
Q R+ AS V A VR R R Q P L+ +C F +RRL G
Sbjct: 35 QRKRSLVAASAVAAADCVVRAAKRQRQQRQPPSLDALPDECLFEVLRRLPG 85
>01_01_0140 + 1265785-1265902,1266424-1266845
Length = 179
Score = 28.7 bits (61), Expect = 5.6
Identities = 20/54 (37%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Frame = -1
Query: 333 AQVAGGETSA--VAAHPVRENRADRLDGNGGRPTGPPNDEITPPARTADIGAPA 178
A+ AGGE +A A+ NRA R G T D PA A APA
Sbjct: 90 ARAAGGEDAAGGEASRASSANRASRARAAAGEDTVGREDSRASPANRARAAAPA 143
>02_05_0482 + 29382696-29383251,29383376-29383692
Length = 290
Score = 28.3 bits (60), Expect = 7.4
Identities = 22/69 (31%), Positives = 26/69 (37%)
Frame = +2
Query: 146 GGAP*RKCSRSAGAPISAVRAGGVISSFGGPVGRPPLPSRRSARFSRTGWAATAEVSPPA 325
G P R P S R GG GG + R+ARFS T A AEV +
Sbjct: 33 GNFPWLSRKRLGAKPPSPQRRGGQEREGGGDEAAGMGTTTRAARFSATSSAEPAEVQSSS 92
Query: 326 TCADSQDIL 352
+ D L
Sbjct: 93 SSRKRADAL 101
>09_06_0239 - 21794691-21795986
Length = 431
Score = 27.9 bits (59), Expect = 9.7
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = +2
Query: 278 FSRTGWAATAEVSPPATC-ADSQDILPPCKLLTATNLTSHHANYNFTGSTSLTRCYSHTE 454
F T + P +C A + D+ P K T NLTS NY ++ S T Y TE
Sbjct: 105 FDTTSDLLWTQCQPCLSCVAQAGDMYDPNKTETYANLTSSSYNYTYS-KQSFTSGYFATE 163
>06_03_0913 +
25913231-25913609,25913702-25913775,25914400-25914540,
25914834-25914946,25915359-25915491,25916213-25916351,
25916428-25916527,25916906-25916963,25917122-25917199,
25917278-25917376,25917657-25917735,25917826-25917974,
25918529-25918834,25918994-25919032
Length = 628
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/24 (54%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Frame = -1
Query: 600 SEVVVTCKIRRPVRS--CLAMRRC 535
S++ +TCKI RPVRS C RC
Sbjct: 398 SQLCITCKIVRPVRSKHCSTCDRC 421
>05_05_0392 + 24629528-24630442
Length = 304
Score = 27.9 bits (59), Expect = 9.7
Identities = 16/56 (28%), Positives = 22/56 (39%)
Frame = +2
Query: 194 SAVRAGGVISSFGGPVGRPPLPSRRSARFSRTGWAATAEVSPPATCADSQDILPPC 361
+A AG + GP +PP+P R R S T + T S+ P C
Sbjct: 205 TAASAGAAAGAASGPQRKPPVPPRPCGRASPRRAQETNSPASSTTTTQSRGPPPHC 260
>04_01_0535 + 6964311-6964685
Length = 124
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +2
Query: 194 SAVRAGGVISSFGGPVGRPPLPSRRSARFSRTGWAATA 307
+A AG ++ GGPV P+ R +A W A A
Sbjct: 12 TAAAAGSTTAAAGGPVAADPVVGRAAAAADPVVWRAAA 49
>03_04_0023 +
16537257-16537272,16537515-16537929,16538404-16538466,
16538604-16538607
Length = 165
Score = 27.9 bits (59), Expect = 9.7
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +2
Query: 419 STSLTRCYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRRIARHE 559
+TSL R H + + H HA H + PP H ++ RHE
Sbjct: 5 ATSLNRSIDHKQGGQQRGTPQQHLHAGHAQE-QPPGH-GHGQVQRHE 49
>02_01_0624 -
4681834-4682298,4684250-4684398,4684479-4684557,
4684827-4684925,4685004-4685081,4685231-4685288,
4685814-4685913,4686000-4686008,4686105-4686138,
4686729-4686911,4687099-4687126,4687268-4687380,
4688253-4688459,4689212-4689511
Length = 633
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/24 (54%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Frame = -1
Query: 600 SEVVVTCKIRRPVRS--CLAMRRC 535
S++ +TCKI RPVRS C RC
Sbjct: 363 SQLCITCKIVRPVRSKHCSTCDRC 386
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,438,434
Number of Sequences: 37544
Number of extensions: 573558
Number of successful extensions: 2158
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 2042
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2156
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2127163404
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -