Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP05_T7_L22
(789 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC040074-1|AAH40074.1| 570|Homo sapiens FAM20C protein protein. 32 2.7
AF533706-1|AAQ09019.1| 584|Homo sapiens unknown protein protein. 32 2.7
AK125767-1|BAC86280.1| 168|Homo sapiens protein ( Homo sapiens ... 31 4.7
AK127657-1|BAC87075.1| 266|Homo sapiens protein ( Homo sapiens ... 31 6.3
Z23064-1|CAA80599.1| 391|Homo sapiens hnRNP G protein protein. 30 8.3
DQ120650-1|ABB92435.1| 384|Homo sapiens RBM1 protein. 30 8.3
BC071925-1|AAH71925.1| 337|Homo sapiens MACF1 protein protein. 30 8.3
BC012942-1|AAH12942.1| 390|Homo sapiens RNA binding motif prote... 30 8.3
BC007435-1|AAH07435.1| 391|Homo sapiens RNA binding motif prote... 30 8.3
BC006550-1|AAH06550.1| 391|Homo sapiens RNA binding motif prote... 30 8.3
AY464692-1|AAR28036.1| 391|Homo sapiens heterogeneous nuclear r... 30 8.3
AL683813-6|CAI39448.1| 391|Homo sapiens RNA binding motif prote... 30 8.3
AL442071-4|CAH73671.1| 5938|Homo sapiens microtubule-actin cross... 30 8.3
AL442071-2|CAH73669.1| 4433|Homo sapiens microtubule-actin cross... 30 8.3
AL442071-1|CAH73668.1| 5430|Homo sapiens microtubule-actin cross... 30 8.3
AL365277-14|CAI16424.1| 542|Homo sapiens microtubule-actin cros... 30 8.3
AL365277-12|CAI16422.1| 5938|Homo sapiens microtubule-actin cros... 30 8.3
AL365277-10|CAI16420.1| 4433|Homo sapiens microtubule-actin cros... 30 8.3
AL365277-7|CAI16417.1| 5430|Homo sapiens microtubule-actin cross... 30 8.3
AL355477-1|CAH70156.1| 5430|Homo sapiens microtubule-actin cross... 30 8.3
AL139416-2|CAI21693.1| 390|Homo sapiens RNA binding motif prote... 30 8.3
AL137853-4|CAI21817.1| 542|Homo sapiens microtubule-actin cross... 30 8.3
AL137853-3|CAI21816.1| 5938|Homo sapiens microtubule-actin cross... 30 8.3
AL137853-2|CAI21815.1| 4433|Homo sapiens microtubule-actin cross... 30 8.3
AL137853-1|CAI21814.1| 5430|Homo sapiens microtubule-actin cross... 30 8.3
AK128617-1|BAC87532.1| 1372|Homo sapiens protein ( Homo sapiens ... 30 8.3
AK096015-1|BAC04674.1| 378|Homo sapiens protein ( Homo sapiens ... 30 8.3
AF317696-1|AAL09459.1| 5938|Homo sapiens macrophin 1 isoform 4 p... 30 8.3
AF266723-1|AAK58567.1| 391|Homo sapiens RBMX protein. 30 8.3
AF141968-1|AAF06360.1| 5373|Homo sapiens trabeculin-alpha protein. 30 8.3
AB029290-1|BAA83821.1| 5430|Homo sapiens actin binding protein A... 30 8.3
AB007934-1|BAA32310.3| 4433|Homo sapiens KIAA0465 protein protein. 30 8.3
>BC040074-1|AAH40074.1| 570|Homo sapiens FAM20C protein protein.
Length = 570
Score = 31.9 bits (69), Expect = 2.7
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Frame = -1
Query: 267 RLDGNGGRPTGPPNDEITPPARTADIGAPA-LRLHFR*GAPPRRRLCCGRF---NQRRQR 100
RL+ G RP+G P PA A++ AP ++ R G PP G N+ R
Sbjct: 18 RLERRGARPSGEPGCSCAQPA--AEVAAPGWAQVRGRPGEPPAASSAAGDAGWPNKHTLR 75
Query: 99 VFQSFS 82
+ Q FS
Sbjct: 76 ILQDFS 81
>AF533706-1|AAQ09019.1| 584|Homo sapiens unknown protein protein.
Length = 584
Score = 31.9 bits (69), Expect = 2.7
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Frame = -1
Query: 267 RLDGNGGRPTGPPNDEITPPARTADIGAPA-LRLHFR*GAPPRRRLCCGRF---NQRRQR 100
RL+ G RP+G P PA A++ AP ++ R G PP G N+ R
Sbjct: 32 RLERRGARPSGEPGCSCAQPA--AEVAAPGWAQVRGRPGEPPAASSAAGDAGWPNKHTLR 89
Query: 99 VFQSFS 82
+ Q FS
Sbjct: 90 ILQDFS 95
>AK125767-1|BAC86280.1| 168|Homo sapiens protein ( Homo sapiens
cDNA FLJ43779 fis, clone TESTI2051488. ).
Length = 168
Score = 31.1 bits (67), Expect = 4.7
Identities = 26/112 (23%), Positives = 44/112 (39%), Gaps = 2/112 (1%)
Frame = +2
Query: 167 CSRSAGAPISAVRAGGVISSFGGPVGRPPLPSRRSARFSRTGWAATAEVSPPATCADSQD 346
C + G P S++ +G IS P SRR SR+ ++ S + S
Sbjct: 53 CPEAGGPPSSSIASGSSISVGNSPSHSHSHTSRRCGGSSRSRECCSSLHSSRGSRGSSWS 112
Query: 347 ILPPCKLLTATNLTSHHANYNFTGSTS--LTRCYSHTEEANREHLSSTHKHA 496
PP + SHH +++ + S + +SH + H + H H+
Sbjct: 113 SSPPGSTCRWCSCHSHHHSHHRSHHRSHHCSHHHSHHHSGHHSH-HNFHNHS 163
>AK127657-1|BAC87075.1| 266|Homo sapiens protein ( Homo sapiens
cDNA FLJ45755 fis, clone MESAN2007032. ).
Length = 266
Score = 30.7 bits (66), Expect = 6.3
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +3
Query: 312 SHLRLPVQTHKTSYHHANFLPQQILPATTQTTILRVPPL-LHDVTPTLRKPTANTCQART 488
S RLP T AN +P+ + LR P LH T +LR PT++ C A +
Sbjct: 34 SAYRLPHLTRGLGAREANQVPELTDSFRPPASSLRPPTSSLHPPTSSLRPPTSSLCPATS 93
Query: 489 S 491
S
Sbjct: 94 S 94
>Z23064-1|CAA80599.1| 391|Homo sapiens hnRNP G protein protein.
Length = 391
Score = 30.3 bits (65), Expect = 8.3
Identities = 27/82 (32%), Positives = 35/82 (42%), Gaps = 10/82 (12%)
Frame = +2
Query: 143 RGGAP*RKCSRSAGAPISAVRAGGVI------SSFGGPVGRPPLPSRRSARFS--RTGWA 298
R G P K S +G S+ GG S+GGP R PLPSRR S G++
Sbjct: 156 RSGGPPPKRSAPSGPVRSSSGMGGRAPVSRGRDSYGGPPRREPLPSRRDVYLSPRDDGYS 215
Query: 299 ATAEVSPP--ATCADSQDILPP 358
S + D++D PP
Sbjct: 216 TKDSYSSRDYPSSRDTRDYAPP 237
>DQ120650-1|ABB92435.1| 384|Homo sapiens RBM1 protein.
Length = 384
Score = 30.3 bits (65), Expect = 8.3
Identities = 27/82 (32%), Positives = 35/82 (42%), Gaps = 10/82 (12%)
Frame = +2
Query: 143 RGGAP*RKCSRSAGAPISAVRAGGVI------SSFGGPVGRPPLPSRRSARFS--RTGWA 298
R G P K S +G S+ GG S+GGP R PLPSRR S G++
Sbjct: 156 RSGGPSPKRSAPSGLVRSSSGMGGRAPLSRGRDSYGGPPRREPLPSRRDVYLSPRDDGYS 215
Query: 299 ATAEVSPP--ATCADSQDILPP 358
S + D++D PP
Sbjct: 216 TKDSYSSRDYPSSRDTRDYAPP 237
>BC071925-1|AAH71925.1| 337|Homo sapiens MACF1 protein protein.
Length = 337
Score = 30.3 bits (65), Expect = 8.3
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +2
Query: 236 PVGRPPLPSRRSARFSRTGWAATAEVSPPATCADSQDILPPC-KLLTATNLTSHHANYNF 412
P R P+R S+ S++ + T+ S PAT A ++P L T H + +
Sbjct: 173 PSSRAASPTRSSSSASQSNHSCTSMPSSPATPASGTKVIPSSGSKLKRPTPTFHSSRTSL 232
Query: 413 TGSTS 427
G TS
Sbjct: 233 AGDTS 237
>BC012942-1|AAH12942.1| 390|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 390
Score = 30.3 bits (65), Expect = 8.3
Identities = 27/82 (32%), Positives = 35/82 (42%), Gaps = 10/82 (12%)
Frame = +2
Query: 143 RGGAP*RKCSRSAGAPISAVRAGGVI------SSFGGPVGRPPLPSRRSARFS--RTGWA 298
R G P K S +G S+ GG S+GGP R PLPSRR S G++
Sbjct: 156 RSGGPSPKRSAPSGLVRSSSGMGGRAPLSRGRDSYGGPPRREPLPSRRDVYLSPRDDGYS 215
Query: 299 ATAEVSPP--ATCADSQDILPP 358
S + D++D PP
Sbjct: 216 TKDSYSSRDYPSSRDTRDYAPP 237
>BC007435-1|AAH07435.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 30.3 bits (65), Expect = 8.3
Identities = 27/82 (32%), Positives = 35/82 (42%), Gaps = 10/82 (12%)
Frame = +2
Query: 143 RGGAP*RKCSRSAGAPISAVRAGGVI------SSFGGPVGRPPLPSRRSARFS--RTGWA 298
R G P K S +G S+ GG S+GGP R PLPSRR S G++
Sbjct: 156 RSGGPPPKRSAPSGPVRSSSGMGGRAPVSRGRDSYGGPPRREPLPSRRDVYLSPRDDGYS 215
Query: 299 ATAEVSPP--ATCADSQDILPP 358
S + D++D PP
Sbjct: 216 TKDSYSSRDYPSSRDTRDYAPP 237
>BC006550-1|AAH06550.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 30.3 bits (65), Expect = 8.3
Identities = 27/82 (32%), Positives = 35/82 (42%), Gaps = 10/82 (12%)
Frame = +2
Query: 143 RGGAP*RKCSRSAGAPISAVRAGGVI------SSFGGPVGRPPLPSRRSARFS--RTGWA 298
R G P K S +G S+ GG S+GGP R PLPSRR S G++
Sbjct: 156 RSGGPPPKRSAPSGPVRSSSGMGGRAPVSRGRDSYGGPPRREPLPSRRDVYLSPRDDGYS 215
Query: 299 ATAEVSPP--ATCADSQDILPP 358
S + D++D PP
Sbjct: 216 TKDSYSSRDYPSSRDTRDYAPP 237
>AY464692-1|AAR28036.1| 391|Homo sapiens heterogeneous nuclear
ribonucleoprotein G protein.
Length = 391
Score = 30.3 bits (65), Expect = 8.3
Identities = 27/82 (32%), Positives = 35/82 (42%), Gaps = 10/82 (12%)
Frame = +2
Query: 143 RGGAP*RKCSRSAGAPISAVRAGGVI------SSFGGPVGRPPLPSRRSARFS--RTGWA 298
R G P K S +G S+ GG S+GGP R PLPSRR S G++
Sbjct: 156 RSGGPPPKRSAPSGPVRSSSGMGGRAPVSRGRDSYGGPPRREPLPSRRDVYLSPRDDGYS 215
Query: 299 ATAEVSPP--ATCADSQDILPP 358
S + D++D PP
Sbjct: 216 TKDSYSSRDYPSSRDTRDYAPP 237
>AL683813-6|CAI39448.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 30.3 bits (65), Expect = 8.3
Identities = 27/82 (32%), Positives = 35/82 (42%), Gaps = 10/82 (12%)
Frame = +2
Query: 143 RGGAP*RKCSRSAGAPISAVRAGGVI------SSFGGPVGRPPLPSRRSARFS--RTGWA 298
R G P K S +G S+ GG S+GGP R PLPSRR S G++
Sbjct: 156 RSGGPPPKRSAPSGPVRSSSGMGGRAPVSRGRDSYGGPPRREPLPSRRDVYLSPRDDGYS 215
Query: 299 ATAEVSPP--ATCADSQDILPP 358
S + D++D PP
Sbjct: 216 TKDSYSSRDYPSSRDTRDYAPP 237
>AL442071-4|CAH73671.1| 5938|Homo sapiens microtubule-actin
crosslinking factor 1 protein.
Length = 5938
Score = 30.3 bits (65), Expect = 8.3
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +2
Query: 236 PVGRPPLPSRRSARFSRTGWAATAEVSPPATCADSQDILPPC-KLLTATNLTSHHANYNF 412
P R P+R S+ S++ + T+ S PAT A ++P L T H + +
Sbjct: 5774 PSSRAASPTRSSSSASQSNHSCTSMPSSPATPASGTKVIPSSGSKLKRPTPTFHSSRTSL 5833
Query: 413 TGSTS 427
G TS
Sbjct: 5834 AGDTS 5838
>AL442071-2|CAH73669.1| 4433|Homo sapiens microtubule-actin
crosslinking factor 1 protein.
Length = 4433
Score = 30.3 bits (65), Expect = 8.3
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +2
Query: 236 PVGRPPLPSRRSARFSRTGWAATAEVSPPATCADSQDILPPC-KLLTATNLTSHHANYNF 412
P R P+R S+ S++ + T+ S PAT A ++P L T H + +
Sbjct: 4269 PSSRAASPTRSSSSASQSNHSCTSMPSSPATPASGTKVIPSSGSKLKRPTPTFHSSRTSL 4328
Query: 413 TGSTS 427
G TS
Sbjct: 4329 AGDTS 4333
>AL442071-1|CAH73668.1| 5430|Homo sapiens microtubule-actin
crosslinking factor 1 protein.
Length = 5430
Score = 30.3 bits (65), Expect = 8.3
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +2
Query: 236 PVGRPPLPSRRSARFSRTGWAATAEVSPPATCADSQDILPPC-KLLTATNLTSHHANYNF 412
P R P+R S+ S++ + T+ S PAT A ++P L T H + +
Sbjct: 5266 PSSRAASPTRSSSSASQSNHSCTSMPSSPATPASGTKVIPSSGSKLKRPTPTFHSSRTSL 5325
Query: 413 TGSTS 427
G TS
Sbjct: 5326 AGDTS 5330
>AL365277-14|CAI16424.1| 542|Homo sapiens microtubule-actin
crosslinking factor 1 protein.
Length = 542
Score = 30.3 bits (65), Expect = 8.3
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +2
Query: 236 PVGRPPLPSRRSARFSRTGWAATAEVSPPATCADSQDILPPC-KLLTATNLTSHHANYNF 412
P R P+R S+ S++ + T+ S PAT A ++P L T H + +
Sbjct: 378 PSSRAASPTRSSSSASQSNHSCTSMPSSPATPASGTKVIPSSGSKLKRPTPTFHSSRTSL 437
Query: 413 TGSTS 427
G TS
Sbjct: 438 AGDTS 442
>AL365277-12|CAI16422.1| 5938|Homo sapiens microtubule-actin
crosslinking factor 1 protein.
Length = 5938
Score = 30.3 bits (65), Expect = 8.3
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +2
Query: 236 PVGRPPLPSRRSARFSRTGWAATAEVSPPATCADSQDILPPC-KLLTATNLTSHHANYNF 412
P R P+R S+ S++ + T+ S PAT A ++P L T H + +
Sbjct: 5774 PSSRAASPTRSSSSASQSNHSCTSMPSSPATPASGTKVIPSSGSKLKRPTPTFHSSRTSL 5833
Query: 413 TGSTS 427
G TS
Sbjct: 5834 AGDTS 5838
>AL365277-10|CAI16420.1| 4433|Homo sapiens microtubule-actin
crosslinking factor 1 protein.
Length = 4433
Score = 30.3 bits (65), Expect = 8.3
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +2
Query: 236 PVGRPPLPSRRSARFSRTGWAATAEVSPPATCADSQDILPPC-KLLTATNLTSHHANYNF 412
P R P+R S+ S++ + T+ S PAT A ++P L T H + +
Sbjct: 4269 PSSRAASPTRSSSSASQSNHSCTSMPSSPATPASGTKVIPSSGSKLKRPTPTFHSSRTSL 4328
Query: 413 TGSTS 427
G TS
Sbjct: 4329 AGDTS 4333
>AL365277-7|CAI16417.1| 5430|Homo sapiens microtubule-actin
crosslinking factor 1 protein.
Length = 5430
Score = 30.3 bits (65), Expect = 8.3
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +2
Query: 236 PVGRPPLPSRRSARFSRTGWAATAEVSPPATCADSQDILPPC-KLLTATNLTSHHANYNF 412
P R P+R S+ S++ + T+ S PAT A ++P L T H + +
Sbjct: 5266 PSSRAASPTRSSSSASQSNHSCTSMPSSPATPASGTKVIPSSGSKLKRPTPTFHSSRTSL 5325
Query: 413 TGSTS 427
G TS
Sbjct: 5326 AGDTS 5330
>AL355477-1|CAH70156.1| 5430|Homo sapiens microtubule-actin
crosslinking factor 1 protein.
Length = 5430
Score = 30.3 bits (65), Expect = 8.3
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +2
Query: 236 PVGRPPLPSRRSARFSRTGWAATAEVSPPATCADSQDILPPC-KLLTATNLTSHHANYNF 412
P R P+R S+ S++ + T+ S PAT A ++P L T H + +
Sbjct: 5266 PSSRAASPTRSSSSASQSNHSCTSMPSSPATPASGTKVIPSSGSKLKRPTPTFHSSRTSL 5325
Query: 413 TGSTS 427
G TS
Sbjct: 5326 AGDTS 5330
>AL139416-2|CAI21693.1| 390|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 390
Score = 30.3 bits (65), Expect = 8.3
Identities = 27/82 (32%), Positives = 35/82 (42%), Gaps = 10/82 (12%)
Frame = +2
Query: 143 RGGAP*RKCSRSAGAPISAVRAGGVI------SSFGGPVGRPPLPSRRSARFS--RTGWA 298
R G P K S +G S+ GG S+GGP R PLPSRR S G++
Sbjct: 156 RSGGPSPKRSAPSGLVRSSSGMGGRAPLSRGRDSYGGPPRREPLPSRRDVYLSPRDDGYS 215
Query: 299 ATAEVSPP--ATCADSQDILPP 358
S + D++D PP
Sbjct: 216 TKDSYSSRDYPSSRDTRDYAPP 237
>AL137853-4|CAI21817.1| 542|Homo sapiens microtubule-actin
crosslinking factor 1 protein.
Length = 542
Score = 30.3 bits (65), Expect = 8.3
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +2
Query: 236 PVGRPPLPSRRSARFSRTGWAATAEVSPPATCADSQDILPPC-KLLTATNLTSHHANYNF 412
P R P+R S+ S++ + T+ S PAT A ++P L T H + +
Sbjct: 378 PSSRAASPTRSSSSASQSNHSCTSMPSSPATPASGTKVIPSSGSKLKRPTPTFHSSRTSL 437
Query: 413 TGSTS 427
G TS
Sbjct: 438 AGDTS 442
>AL137853-3|CAI21816.1| 5938|Homo sapiens microtubule-actin
crosslinking factor 1 protein.
Length = 5938
Score = 30.3 bits (65), Expect = 8.3
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +2
Query: 236 PVGRPPLPSRRSARFSRTGWAATAEVSPPATCADSQDILPPC-KLLTATNLTSHHANYNF 412
P R P+R S+ S++ + T+ S PAT A ++P L T H + +
Sbjct: 5774 PSSRAASPTRSSSSASQSNHSCTSMPSSPATPASGTKVIPSSGSKLKRPTPTFHSSRTSL 5833
Query: 413 TGSTS 427
G TS
Sbjct: 5834 AGDTS 5838
>AL137853-2|CAI21815.1| 4433|Homo sapiens microtubule-actin
crosslinking factor 1 protein.
Length = 4433
Score = 30.3 bits (65), Expect = 8.3
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +2
Query: 236 PVGRPPLPSRRSARFSRTGWAATAEVSPPATCADSQDILPPC-KLLTATNLTSHHANYNF 412
P R P+R S+ S++ + T+ S PAT A ++P L T H + +
Sbjct: 4269 PSSRAASPTRSSSSASQSNHSCTSMPSSPATPASGTKVIPSSGSKLKRPTPTFHSSRTSL 4328
Query: 413 TGSTS 427
G TS
Sbjct: 4329 AGDTS 4333
>AL137853-1|CAI21814.1| 5430|Homo sapiens microtubule-actin
crosslinking factor 1 protein.
Length = 5430
Score = 30.3 bits (65), Expect = 8.3
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +2
Query: 236 PVGRPPLPSRRSARFSRTGWAATAEVSPPATCADSQDILPPC-KLLTATNLTSHHANYNF 412
P R P+R S+ S++ + T+ S PAT A ++P L T H + +
Sbjct: 5266 PSSRAASPTRSSSSASQSNHSCTSMPSSPATPASGTKVIPSSGSKLKRPTPTFHSSRTSL 5325
Query: 413 TGSTS 427
G TS
Sbjct: 5326 AGDTS 5330
>AK128617-1|BAC87532.1| 1372|Homo sapiens protein ( Homo sapiens cDNA
FLJ46776 fis, clone TRACH3026650, highly similar to
Actin cross-linking family protein 7. ).
Length = 1372
Score = 30.3 bits (65), Expect = 8.3
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +2
Query: 236 PVGRPPLPSRRSARFSRTGWAATAEVSPPATCADSQDILPPC-KLLTATNLTSHHANYNF 412
P R P+R S+ S++ + T+ S PAT A ++P L T H + +
Sbjct: 1208 PSSRAASPTRSSSSASQSNHSCTSMPSSPATPASGTKVIPSSGSKLKRPTPTFHSSRTSL 1267
Query: 413 TGSTS 427
G TS
Sbjct: 1268 AGDTS 1272
>AK096015-1|BAC04674.1| 378|Homo sapiens protein ( Homo sapiens
cDNA FLJ38696 fis, clone KIDNE2001931, highly similar to
HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN G. ).
Length = 378
Score = 30.3 bits (65), Expect = 8.3
Identities = 27/82 (32%), Positives = 35/82 (42%), Gaps = 10/82 (12%)
Frame = +2
Query: 143 RGGAP*RKCSRSAGAPISAVRAGGVI------SSFGGPVGRPPLPSRRSARFS--RTGWA 298
R G P K S +G S+ GG S+GGP R PLPSRR S G++
Sbjct: 143 RSGGPPPKRSAPSGPVRSSSGMGGRAPVSRGRDSYGGPPRREPLPSRRDVYLSPRDDGYS 202
Query: 299 ATAEVSPP--ATCADSQDILPP 358
S + D++D PP
Sbjct: 203 TKDSYSSRDYPSSRDTRDYAPP 224
>AF317696-1|AAL09459.1| 5938|Homo sapiens macrophin 1 isoform 4
protein.
Length = 5938
Score = 30.3 bits (65), Expect = 8.3
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +2
Query: 236 PVGRPPLPSRRSARFSRTGWAATAEVSPPATCADSQDILPPC-KLLTATNLTSHHANYNF 412
P R P+R S+ S++ + T+ S PAT A ++P L T H + +
Sbjct: 5774 PSSRAASPTRSSSSASQSNHSCTSMPSSPATPASGTKVIPSSGSKLKRPTPTFHSSRTSL 5833
Query: 413 TGSTS 427
G TS
Sbjct: 5834 AGDTS 5838
>AF266723-1|AAK58567.1| 391|Homo sapiens RBMX protein.
Length = 391
Score = 30.3 bits (65), Expect = 8.3
Identities = 27/82 (32%), Positives = 35/82 (42%), Gaps = 10/82 (12%)
Frame = +2
Query: 143 RGGAP*RKCSRSAGAPISAVRAGGVI------SSFGGPVGRPPLPSRRSARFS--RTGWA 298
R G P K S +G S+ GG S+GGP R PLPSRR S G++
Sbjct: 156 RSGGPPPKRSAPSGPVRSSSGMGGRAPVSRGRDSYGGPPRREPLPSRRDVYLSPRDDGYS 215
Query: 299 ATAEVSPP--ATCADSQDILPP 358
S + D++D PP
Sbjct: 216 TKDSYSSRDYPSSRDTRDYAPP 237
>AF141968-1|AAF06360.1| 5373|Homo sapiens trabeculin-alpha protein.
Length = 5373
Score = 30.3 bits (65), Expect = 8.3
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +2
Query: 236 PVGRPPLPSRRSARFSRTGWAATAEVSPPATCADSQDILPPC-KLLTATNLTSHHANYNF 412
P R P+R S+ S++ + T+ S PAT A ++P L T H + +
Sbjct: 5209 PSSRAASPTRSSSSASQSNHSCTSMPSSPATPASGTKVIPSSGSKLKRPTPTFHSSRTSL 5268
Query: 413 TGSTS 427
G TS
Sbjct: 5269 AGDTS 5273
>AB029290-1|BAA83821.1| 5430|Homo sapiens actin binding protein ABP620
protein.
Length = 5430
Score = 30.3 bits (65), Expect = 8.3
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +2
Query: 236 PVGRPPLPSRRSARFSRTGWAATAEVSPPATCADSQDILPPC-KLLTATNLTSHHANYNF 412
P R P+R S+ S++ + T+ S PAT A ++P L T H + +
Sbjct: 5266 PSSRAASPTRSSSSASQSNHSCTSMPSSPATPASGTKVIPSSGSKLKRPTPTFHSSRTSL 5325
Query: 413 TGSTS 427
G TS
Sbjct: 5326 AGDTS 5330
>AB007934-1|BAA32310.3| 4433|Homo sapiens KIAA0465 protein protein.
Length = 4433
Score = 30.3 bits (65), Expect = 8.3
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +2
Query: 236 PVGRPPLPSRRSARFSRTGWAATAEVSPPATCADSQDILPPC-KLLTATNLTSHHANYNF 412
P R P+R S+ S++ + T+ S PAT A ++P L T H + +
Sbjct: 4269 PSSRAASPTRSSSSASQSNHSCTSMPSSPATPASGTKVIPSSGSKLKRPTPTFHSSRTSL 4328
Query: 413 TGSTS 427
G TS
Sbjct: 4329 AGDTS 4333
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,642,104
Number of Sequences: 237096
Number of extensions: 2900116
Number of successful extensions: 10030
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 9118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10022
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9646050614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -