Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP05_T7_L22
(789 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical pr... 36 0.044
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 33 0.18
AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical... 31 0.94
Z69792-1|CAB61002.1| 605|Caenorhabditis elegans Hypothetical pr... 30 2.2
U67954-4|AAM54180.1| 345|Caenorhabditis elegans Wrapper/rega-1/... 30 2.2
D85744-1|BAA12861.1| 605|Caenorhabditis elegans HCH-1 protein. 30 2.2
AF456364-1|AAL60235.1| 344|Caenorhabditis elegans immunoglobuli... 30 2.2
AC006720-9|AAF60443.2| 480|Caenorhabditis elegans Hypothetical ... 30 2.2
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 29 2.9
U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction... 29 2.9
U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction... 29 2.9
U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction... 29 2.9
U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction... 29 2.9
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 29 2.9
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 29 2.9
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 29 3.8
AL032627-21|CAD66221.1| 289|Caenorhabditis elegans Hypothetical... 29 3.8
AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen prot... 29 3.8
Z99281-17|CAB54456.2| 177|Caenorhabditis elegans Hypothetical p... 29 5.0
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 29 5.0
U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter... 29 5.0
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 29 5.0
Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z50795-1|CAA90662.1| 502|Caenorhabditis elegans Hypothetical pr... 28 8.8
U88311-8|AAB42341.2| 918|Caenorhabditis elegans Hypothetical pr... 28 8.8
AC087081-12|AAK66039.2| 324|Caenorhabditis elegans Hypothetical... 28 8.8
AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen pro... 28 8.8
AC006790-10|AAF60736.1| 371|Caenorhabditis elegans Collagen pro... 28 8.8
>Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical
protein M02G9.3 protein.
Length = 294
Score = 35.5 bits (78), Expect = 0.044
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +3
Query: 459 PTANTCQARTSTHFTGKTCIRQRNPNTAASPDTNAPDVLSYR--SRRLQMCQFFFPTETC 632
P+ ++CQ+ S+ T TCIR N+ ++ + + R S+ LQ+C T TC
Sbjct: 90 PSCSSCQSACSSACTTPTCIRTCQRNSCSNLCNTGSNSCTNRCNSQCLQICTTPSCTNTC 149
Query: 633 LLSCLLAC 656
SC AC
Sbjct: 150 SNSCSNAC 157
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 33.5 bits (73), Expect = 0.18
Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 5/93 (5%)
Frame = -1
Query: 471 CSRLASSVWE*HRVRE--VEPVKL*FAWWLVRFVAVRSLHGGKMSCESAQVAGGETSAVA 298
C A +W R + +EP++ A AV GG +CE+ + G A A
Sbjct: 56 CRGSAKDIWSEVRTLKTALEPIQNRTARQAYADAAVHGGGGGGGNCEACCLPGPAGPAGA 115
Query: 297 -AHPVRENR--ADRLDGNGGRPTGPPNDEITPP 208
+P R + A L GN G+P P + ITPP
Sbjct: 116 PGNPGRPGKPGAPGLPGNPGKPPVQPCEPITPP 148
>AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical
protein Y41C4A.16 protein.
Length = 309
Score = 31.1 bits (67), Expect = 0.94
Identities = 24/63 (38%), Positives = 25/63 (39%), Gaps = 4/63 (6%)
Frame = -1
Query: 357 GGKMSCESAQVAG-GETSAVAAHPVRENR--ADRLDGNGGRPTGPPNDEIT-PPARTADI 190
GG SC + G S P R R A L GN GRP P IT PP R
Sbjct: 101 GGGGSCSGCCLPGPAGPSGAPGKPGRPGRPGAGGLPGNPGRPPAQPCHPITPPPCRPCPQ 160
Query: 189 GAP 181
G P
Sbjct: 161 GPP 163
>Z69792-1|CAB61002.1| 605|Caenorhabditis elegans Hypothetical
protein F40E10.1 protein.
Length = 605
Score = 29.9 bits (64), Expect = 2.2
Identities = 20/54 (37%), Positives = 22/54 (40%)
Frame = +3
Query: 387 PATTQTTILRVPPLLHDVTPTLRKPTANTCQARTSTHFTGKTCIRQRNPNTAAS 548
P TT TT P + V+PT T ARTST T Q P T S
Sbjct: 478 PTTTSTTTTTAPITVPTVSPTTTTTRQTTTTARTST----TTTTTQAPPTTTTS 527
>U67954-4|AAM54180.1| 345|Caenorhabditis elegans
Wrapper/rega-1/klingon homologprotein 1, isoform c
protein.
Length = 345
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/74 (25%), Positives = 31/74 (41%)
Frame = -1
Query: 450 VWE*HRVREVEPVKL*FAWWLVRFVAVRSLHGGKMSCESAQVAGGETSAVAAHPVRENRA 271
VW + E +K + V+ H GK +C + +AG + + + H +
Sbjct: 151 VWTKQAAKLPEDIKREHGGARIVITEVKKHHAGKYNCLAENIAGSDRATIDIHVAEPLQG 210
Query: 270 DRLDGNGGRPTGPP 229
+R GRP GPP
Sbjct: 211 ER----EGRP-GPP 219
>D85744-1|BAA12861.1| 605|Caenorhabditis elegans HCH-1 protein.
Length = 605
Score = 29.9 bits (64), Expect = 2.2
Identities = 20/54 (37%), Positives = 22/54 (40%)
Frame = +3
Query: 387 PATTQTTILRVPPLLHDVTPTLRKPTANTCQARTSTHFTGKTCIRQRNPNTAAS 548
P TT TT P + V+PT T ARTST T Q P T S
Sbjct: 478 PTTTSTTTTTAPITVPTVSPTTTTTRQTTTTARTST----TTTTTQAPPTTTTS 527
>AF456364-1|AAL60235.1| 344|Caenorhabditis elegans immunoglobulin
domain-containingprotein WRK-1C protein.
Length = 344
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/74 (25%), Positives = 31/74 (41%)
Frame = -1
Query: 450 VWE*HRVREVEPVKL*FAWWLVRFVAVRSLHGGKMSCESAQVAGGETSAVAAHPVRENRA 271
VW + E +K + V+ H GK +C + +AG + + + H +
Sbjct: 150 VWTKQAAKLPEDIKREHGGARIVITEVKKHHAGKYNCLAENIAGSDRATIDIHVAEPLQG 209
Query: 270 DRLDGNGGRPTGPP 229
+R GRP GPP
Sbjct: 210 ER----EGRP-GPP 218
>AC006720-9|AAF60443.2| 480|Caenorhabditis elegans Hypothetical
protein Y17G9B.1 protein.
Length = 480
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -3
Query: 133 VLWQVQPETSTCVPELQCVTDKWFWLPLYVPFKV 32
+LWQ+ +TC P LQ ++W L L + FK+
Sbjct: 421 ILWQL---ITTCKPRLQVDKERWIQLLLNIKFKI 451
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = -1
Query: 345 SCESAQVAGGETSA-VAAHPVRENR--ADRLDGNGGRPTGPPNDEITPP 208
SCES + G A P R + A L GN GRP P + ITPP
Sbjct: 95 SCESCCLPGPPGPAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPP 143
>U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction
molecule protein1, isoform b protein.
Length = 944
Score = 29.5 bits (63), Expect = 2.9
Identities = 25/105 (23%), Positives = 46/105 (43%), Gaps = 3/105 (2%)
Frame = +2
Query: 242 GRPPLPSRRSARFSRTGWAATAEVSPPATCADSQDILPPCKLLTATNLTSHHANYNFTGS 421
G PLPS + R + + ++A S + D+ PP L +S A+Y +
Sbjct: 75 GAQPLPSVLTQRTTTSSYSAP-NYSASSMSGVPSDVAPPPPLPIPNQSSSSAASYQHHHA 133
Query: 422 TSLTRCYSHT-EEANREHLSSTHKHALHRKNLH--PPAEPEHRRI 547
+S+++ S + E+ EH +T + + +H P P H +
Sbjct: 134 SSISKSISSSREDLLSEH--ATSRSTVREIPVHRAPSTAPSHSSV 176
>U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction
molecule protein1, isoform c protein.
Length = 1148
Score = 29.5 bits (63), Expect = 2.9
Identities = 25/105 (23%), Positives = 46/105 (43%), Gaps = 3/105 (2%)
Frame = +2
Query: 242 GRPPLPSRRSARFSRTGWAATAEVSPPATCADSQDILPPCKLLTATNLTSHHANYNFTGS 421
G PLPS + R + + ++A S + D+ PP L +S A+Y +
Sbjct: 75 GAQPLPSVLTQRTTTSSYSAP-NYSASSMSGVPSDVAPPPPLPIPNQSSSSAASYQHHHA 133
Query: 422 TSLTRCYSHT-EEANREHLSSTHKHALHRKNLH--PPAEPEHRRI 547
+S+++ S + E+ EH +T + + +H P P H +
Sbjct: 134 SSISKSISSSREDLLSEH--ATSRSTVREIPVHRAPSTAPSHSSV 176
>U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction
molecule protein1, isoform d protein.
Length = 1439
Score = 29.5 bits (63), Expect = 2.9
Identities = 25/105 (23%), Positives = 46/105 (43%), Gaps = 3/105 (2%)
Frame = +2
Query: 242 GRPPLPSRRSARFSRTGWAATAEVSPPATCADSQDILPPCKLLTATNLTSHHANYNFTGS 421
G PLPS + R + + ++A S + D+ PP L +S A+Y +
Sbjct: 75 GAQPLPSVLTQRTTTSSYSAP-NYSASSMSGVPSDVAPPPPLPIPNQSSSSAASYQHHHA 133
Query: 422 TSLTRCYSHT-EEANREHLSSTHKHALHRKNLH--PPAEPEHRRI 547
+S+++ S + E+ EH +T + + +H P P H +
Sbjct: 134 SSISKSISSSREDLLSEH--ATSRSTVREIPVHRAPSTAPSHSSV 176
>U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction
molecule protein1, isoform a protein.
Length = 1480
Score = 29.5 bits (63), Expect = 2.9
Identities = 25/105 (23%), Positives = 46/105 (43%), Gaps = 3/105 (2%)
Frame = +2
Query: 242 GRPPLPSRRSARFSRTGWAATAEVSPPATCADSQDILPPCKLLTATNLTSHHANYNFTGS 421
G PLPS + R + + ++A S + D+ PP L +S A+Y +
Sbjct: 75 GAQPLPSVLTQRTTTSSYSAP-NYSASSMSGVPSDVAPPPPLPIPNQSSSSAASYQHHHA 133
Query: 422 TSLTRCYSHT-EEANREHLSSTHKHALHRKNLH--PPAEPEHRRI 547
+S+++ S + E+ EH +T + + +H P P H +
Sbjct: 134 SSISKSISSSREDLLSEH--ATSRSTVREIPVHRAPSTAPSHSSV 176
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = -1
Query: 345 SCESAQVAGGETSA-VAAHPVRENR--ADRLDGNGGRPTGPPNDEITPP 208
SCES + G A P R + A L GN GRP P + ITPP
Sbjct: 95 SCESCCLPGPPGPAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPP 143
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = -1
Query: 345 SCESAQVAGGETSA-VAAHPVRENR--ADRLDGNGGRPTGPPNDEITPP 208
SCES + G A P R + A L GN GRP P + ITPP
Sbjct: 95 SCESCCLPGPPGPAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPP 143
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 29.1 bits (62), Expect = 3.8
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
Frame = -1
Query: 354 GKMSCESAQVAGGE----TSAVAAHPVRENRADRLDGNGGRPTGPPNDEITPP 208
G CE + G + T A P + A L+GN GRP P + ITPP
Sbjct: 82 GNGQCEGCCLPGAQGPPGTPGRAGRPGKPG-APGLNGNPGRPPKEPCEPITPP 133
>AL032627-21|CAD66221.1| 289|Caenorhabditis elegans Hypothetical
protein Y41C4A.19 protein.
Length = 289
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/29 (51%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = -1
Query: 264 LDGNGGRPTGPPNDEIT-PPARTADIGAP 181
L GN GRP P D IT PP R G P
Sbjct: 114 LPGNPGRPPAQPCDPITPPPCRPCPQGPP 142
>AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen protein
108 protein.
Length = 304
Score = 29.1 bits (62), Expect = 3.8
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = -1
Query: 357 GGKMSCESAQVAGGETSA-VAAHPVRENRADR--LDGNGGRPTGPPNDEITPP 208
G +CE+ + G A P R +A L GN GRP P + ITPP
Sbjct: 96 GAPGNCEACCLPGAAGPAGTPGKPGRPGKAGAPGLPGNPGRPPQQPCEPITPP 148
>Z99281-17|CAB54456.2| 177|Caenorhabditis elegans Hypothetical
protein Y57G11C.33 protein.
Length = 177
Score = 28.7 bits (61), Expect = 5.0
Identities = 23/85 (27%), Positives = 34/85 (40%)
Frame = +2
Query: 257 PSRRSARFSRTGWAATAEVSPPATCADSQDILPPCKLLTATNLTSHHANYNFTGSTSLTR 436
P+R + + R W T V AD++ I P T + +A+Y T ST +
Sbjct: 59 PARLTEKVPRDVWENTI-VRINRIFADAEAITPQTIFETVLGCFTCYASYAITKSTYRRK 117
Query: 437 CYSHTEEANREHLSSTHKHALHRKN 511
E NRE+ H H +N
Sbjct: 118 LDELQEFLNRENREIYHHVGFHIRN 142
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical
protein T11F9.9 protein.
Length = 299
Score = 28.7 bits (61), Expect = 5.0
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 6/58 (10%)
Frame = -1
Query: 363 LHGGKMS---CESAQVAGGETSA-VAAHPVRENR--ADRLDGNGGRPTGPPNDEITPP 208
++GG S C++ + G A P R + A L GN GRP P D ITPP
Sbjct: 86 VNGGSASAGGCDACCLPGAAGPAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCDPITPP 143
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 28.7 bits (61), Expect = 5.0
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 6/58 (10%)
Frame = -1
Query: 363 LHGGKMS---CESAQVAGGETSA-VAAHPVRENR--ADRLDGNGGRPTGPPNDEITPP 208
++GG S C++ + G A P R + A L GN GRP P D ITPP
Sbjct: 86 VNGGSASAGGCDACCLPGAAGPAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCDPITPP 143
>U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 6 protein.
Length = 1254
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/58 (27%), Positives = 21/58 (36%)
Frame = +3
Query: 384 LPATTQTTILRVPPLLHDVTPTLRKPTANTCQARTSTHFTGKTCIRQRNPNTAASPDT 557
LP TT+ T+ P + + +KPT T T K P T P T
Sbjct: 591 LPFTTEQTVTTEEPTTAEKSTATQKPTTTQESVSTEKTSTTKKASTTEEPTTTDEPTT 648
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 28.7 bits (61), Expect = 5.0
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
Frame = -1
Query: 354 GKMSCESAQVAGGE----TSAVAAHPVRENRADRLDGNGGRPTGPPNDEITPP 208
G CE + G + T A P + A L+GN GRP P + +TPP
Sbjct: 84 GNGQCEGCCLPGAQGPPGTPGSAGRPGKPG-APGLNGNPGRPPKEPCEPLTPP 135
>Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical
protein F52B11.4 protein.
Length = 304
Score = 28.3 bits (60), Expect = 6.6
Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Frame = -1
Query: 345 SCESAQVAGGETSA-VAAHPVRENR--ADRLDGNGGRPTGPPNDEITPP 208
SC + G A P R R A L GN GRP P + ITPP
Sbjct: 100 SCSGCCLPGAAGPAGTPGKPGRPGRPGAAGLPGNPGRPPAQPCEPITPP 148
>Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.6 protein.
Length = 304
Score = 28.3 bits (60), Expect = 6.6
Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Frame = -1
Query: 345 SCESAQVAGGETSA-VAAHPVRENR--ADRLDGNGGRPTGPPNDEITPP 208
SC + G A P R R A L GN GRP P + ITPP
Sbjct: 100 SCSGCCLPGAAGPAGTPGKPGRPGRPGAAGLPGNPGRPPAQPCEPITPP 148
>Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.5 protein.
Length = 304
Score = 28.3 bits (60), Expect = 6.6
Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Frame = -1
Query: 345 SCESAQVAGGETSA-VAAHPVRENR--ADRLDGNGGRPTGPPNDEITPP 208
SC + G A P R R A L GN GRP P + ITPP
Sbjct: 100 SCSGCCLPGAAGPAGTPGKPGRPGRPGAAGLPGNPGRPPAQPCEPITPP 148
>Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.1 protein.
Length = 304
Score = 28.3 bits (60), Expect = 6.6
Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Frame = -1
Query: 345 SCESAQVAGGETSA-VAAHPVRENR--ADRLDGNGGRPTGPPNDEITPP 208
SC + G A P R R A L GN GRP P + ITPP
Sbjct: 100 SCSGCCLPGAAGPAGTPGKPGRPGRPGAAGLPGNPGRPPAQPCEPITPP 148
>Z50795-1|CAA90662.1| 502|Caenorhabditis elegans Hypothetical
protein R166.1 protein.
Length = 502
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 305 AEVSPPATCADSQDILPPCKLLTATNLTSHHANYNFTGSTSLTR 436
A + P T S + PP TA + + NF+G+ S+TR
Sbjct: 205 AGILPATTTNVSAAVPPPSSRATANVFSGNSIGLNFSGAASVTR 248
>U88311-8|AAB42341.2| 918|Caenorhabditis elegans Hypothetical
protein C10H11.1 protein.
Length = 918
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/56 (23%), Positives = 23/56 (41%)
Frame = +1
Query: 184 GSNIGSPCWRRDLVVWRTRRPASVTVEAICPVLADWVGRDRGSLTSGYLCRLTRHL 351
G N C RR+ + + +P+ V + + W GR ++S Y + L
Sbjct: 346 GDNTAETCSRRERLSYEIMKPSEVLIFDFGSEIYVWTGRYSNKVSSAYAQEYAKQL 401
>AC087081-12|AAK66039.2| 324|Caenorhabditis elegans Hypothetical
protein Y82E9BL.17 protein.
Length = 324
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/51 (23%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +1
Query: 313 LTSGYLCRLTRHLTTMQTSYRNKSYQPPRKLQFYGFHLSYTM-LLPH*GSQ 462
+++ + C ++L + +++ K + +KL+F HL + + + PH SQ
Sbjct: 137 ISAPHKCYTNKNLKLLLKTWKAKKWNHVKKLEFSRVHLDFILSIFPHFNSQ 187
>AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen
protein 112 protein.
Length = 297
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -1
Query: 264 LDGNGGRPTGPPNDEITPP 208
L GN GRP P D ITPP
Sbjct: 123 LPGNPGRPPQAPCDPITPP 141
>AC006790-10|AAF60736.1| 371|Caenorhabditis elegans Collagen
protein 71 protein.
Length = 371
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -1
Query: 273 ADRLDGNGGRPTGPPNDEITPP 208
A+ L+GN GRP P + +TPP
Sbjct: 194 ANGLNGNPGRPPEAPCEPVTPP 215
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,640,495
Number of Sequences: 27780
Number of extensions: 428890
Number of successful extensions: 1566
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1561
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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