Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP05_T7_L14
(732 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL035406-9|CAI19891.1| 1954|Homo sapiens chromodomain helicase D... 76 1e-13
AL031847-10|CAI19450.1| 1954|Homo sapiens chromodomain helicase ... 76 1e-13
AK127046-1|BAC86802.1| 1225|Homo sapiens protein ( Homo sapiens ... 76 1e-13
AF425231-1|AAL98962.1| 1954|Homo sapiens chromodomain helicase D... 76 1e-13
X86691-1|CAA60384.1| 1912|Homo sapiens Mi-2 protein protein. 73 1e-12
BC038596-1|AAH38596.1| 1937|Homo sapiens CHD4 protein protein. 73 1e-12
BC025962-1|AAH25962.1| 355|Homo sapiens Unknown (protein for IM... 73 1e-12
BC014964-1|AAH14964.1| 355|Homo sapiens Unknown (protein for IM... 73 1e-12
U91543-1|AAC39923.1| 2000|Homo sapiens zinc-finger helicase prot... 72 2e-12
U08379-1|AAC50228.1| 530|Homo sapiens Mi-2 autoantigen 240 kDa ... 72 2e-12
AF006515-1|AAB87383.1| 1944|Homo sapiens CHD3 protein. 72 2e-12
AK127869-1|BAC87169.1| 1533|Homo sapiens protein ( Homo sapiens ... 31 4.3
>AL035406-9|CAI19891.1| 1954|Homo sapiens chromodomain helicase DNA
binding protein 5 protein.
Length = 1954
Score = 76.2 bits (179), Expect = 1e-13
Identities = 39/137 (28%), Positives = 67/137 (48%), Gaps = 1/137 (0%)
Frame = -3
Query: 673 EVCSSFXLTDVDIQYADADYENLTTYKLFQQHVRPMLVKENPKVPVSKLMMLVAAKWRMF 494
++ + + L DVD +++ DY LT YK F Q +RP++ K+NPK+P+SK+M ++ AKWR F
Sbjct: 136 QLMAEWGLDDVDYLFSEEDYHTLTNYKAFSQFLRPLIAKKNPKIPMSKMMTVLGAKWREF 195
Query: 493 CETNPHLSTSVPQSMGS-EENTNTSATSDYVSKRPGRTPKXXXXXXXXXXXXXXXXXXXX 317
NP +S + + T S ++ P + P+
Sbjct: 196 SANNPFKGSSAAAAAAAVAAAVETVTISPPLAVSPPQVPQPVPIRKAKTKEGKGPGVRKK 255
Query: 316 XEGATVPRKRGRKPKNA 266
+G+ +K+G+ K A
Sbjct: 256 IKGSKDGKKKGKGKKTA 272
>AL031847-10|CAI19450.1| 1954|Homo sapiens chromodomain helicase DNA
binding protein 5 protein.
Length = 1954
Score = 76.2 bits (179), Expect = 1e-13
Identities = 39/137 (28%), Positives = 67/137 (48%), Gaps = 1/137 (0%)
Frame = -3
Query: 673 EVCSSFXLTDVDIQYADADYENLTTYKLFQQHVRPMLVKENPKVPVSKLMMLVAAKWRMF 494
++ + + L DVD +++ DY LT YK F Q +RP++ K+NPK+P+SK+M ++ AKWR F
Sbjct: 136 QLMAEWGLDDVDYLFSEEDYHTLTNYKAFSQFLRPLIAKKNPKIPMSKMMTVLGAKWREF 195
Query: 493 CETNPHLSTSVPQSMGS-EENTNTSATSDYVSKRPGRTPKXXXXXXXXXXXXXXXXXXXX 317
NP +S + + T S ++ P + P+
Sbjct: 196 SANNPFKGSSAAAAAAAVAAAVETVTISPPLAVSPPQVPQPVPIRKAKTKEGKGPGVRKK 255
Query: 316 XEGATVPRKRGRKPKNA 266
+G+ +K+G+ K A
Sbjct: 256 IKGSKDGKKKGKGKKTA 272
>AK127046-1|BAC86802.1| 1225|Homo sapiens protein ( Homo sapiens
cDNA FLJ45103 fis, clone BRAWH3032571, moderately
similar to Chromodomain helicase-DNA-binding protein 4.
).
Length = 1225
Score = 76.2 bits (179), Expect = 1e-13
Identities = 39/137 (28%), Positives = 67/137 (48%), Gaps = 1/137 (0%)
Frame = -3
Query: 673 EVCSSFXLTDVDIQYADADYENLTTYKLFQQHVRPMLVKENPKVPVSKLMMLVAAKWRMF 494
++ + + L DVD +++ DY LT YK F Q +RP++ K+NPK+P+SK+M ++ AKWR F
Sbjct: 136 QLMAEWGLDDVDYLFSEEDYHTLTNYKAFSQFLRPLIAKKNPKIPMSKMMTVLGAKWREF 195
Query: 493 CETNPHLSTSVPQSMGS-EENTNTSATSDYVSKRPGRTPKXXXXXXXXXXXXXXXXXXXX 317
NP +S + + T S ++ P + P+
Sbjct: 196 SANNPFKGSSAAAAAAAVAAAVETVTISPPLAVSPPQVPQPVPIRKAKTKEGKGPGVRKK 255
Query: 316 XEGATVPRKRGRKPKNA 266
+G+ +K+G+ K A
Sbjct: 256 IKGSKDGKKKGKGKKTA 272
>AF425231-1|AAL98962.1| 1954|Homo sapiens chromodomain helicase DNA
binding protein 5 protein.
Length = 1954
Score = 76.2 bits (179), Expect = 1e-13
Identities = 39/137 (28%), Positives = 67/137 (48%), Gaps = 1/137 (0%)
Frame = -3
Query: 673 EVCSSFXLTDVDIQYADADYENLTTYKLFQQHVRPMLVKENPKVPVSKLMMLVAAKWRMF 494
++ + + L DVD +++ DY LT YK F Q +RP++ K+NPK+P+SK+M ++ AKWR F
Sbjct: 136 QLMAEWGLDDVDYLFSEEDYHTLTNYKAFSQFLRPLIAKKNPKIPMSKMMTVLGAKWREF 195
Query: 493 CETNPHLSTSVPQSMGS-EENTNTSATSDYVSKRPGRTPKXXXXXXXXXXXXXXXXXXXX 317
NP +S + + T S ++ P + P+
Sbjct: 196 SANNPFKGSSAAAAAAAVAAAVETVTISPPLAVSPPQVPQPVPIRKAKTKEGKGPGVRKK 255
Query: 316 XEGATVPRKRGRKPKNA 266
+G+ +K+G+ K A
Sbjct: 256 IKGSKDGKKKGKGKKTA 272
>X86691-1|CAA60384.1| 1912|Homo sapiens Mi-2 protein protein.
Length = 1912
Score = 72.5 bits (170), Expect = 1e-12
Identities = 29/70 (41%), Positives = 45/70 (64%)
Frame = -3
Query: 673 EVCSSFXLTDVDIQYADADYENLTTYKLFQQHVRPMLVKENPKVPVSKLMMLVAAKWRMF 494
++ + + D+D +++ DY LT YK F Q VRP++ +NPK+ VSK+MM++ AKWR F
Sbjct: 153 QLLEDWGMEDIDHVFSEEDYRTLTNYKAFSQFVRPLIAAKNPKIAVSKMMMVLGAKWREF 212
Query: 493 CETNPHLSTS 464
NP +S
Sbjct: 213 STNNPFKGSS 222
>BC038596-1|AAH38596.1| 1937|Homo sapiens CHD4 protein protein.
Length = 1937
Score = 72.5 bits (170), Expect = 1e-12
Identities = 29/70 (41%), Positives = 45/70 (64%)
Frame = -3
Query: 673 EVCSSFXLTDVDIQYADADYENLTTYKLFQQHVRPMLVKENPKVPVSKLMMLVAAKWRMF 494
++ + + D+D +++ DY LT YK F Q VRP++ +NPK+ VSK+MM++ AKWR F
Sbjct: 150 QLLEDWGMEDIDHVFSEEDYRTLTNYKAFSQFVRPLIAAKNPKIAVSKMMMVLGAKWREF 209
Query: 493 CETNPHLSTS 464
NP +S
Sbjct: 210 STNNPFKGSS 219
>BC025962-1|AAH25962.1| 355|Homo sapiens Unknown (protein for
IMAGE:5018055) protein.
Length = 355
Score = 72.5 bits (170), Expect = 1e-12
Identities = 29/70 (41%), Positives = 45/70 (64%)
Frame = -3
Query: 673 EVCSSFXLTDVDIQYADADYENLTTYKLFQQHVRPMLVKENPKVPVSKLMMLVAAKWRMF 494
++ + + D+D +++ DY LT YK F Q VRP++ +NPK+ VSK+MM++ AKWR F
Sbjct: 153 QLLEDWGMEDIDHVFSEEDYRTLTNYKAFSQFVRPLIAAKNPKIAVSKMMMVLGAKWREF 212
Query: 493 CETNPHLSTS 464
NP +S
Sbjct: 213 STNNPFKGSS 222
>BC014964-1|AAH14964.1| 355|Homo sapiens Unknown (protein for
IMAGE:4907274) protein.
Length = 355
Score = 72.5 bits (170), Expect = 1e-12
Identities = 29/70 (41%), Positives = 45/70 (64%)
Frame = -3
Query: 673 EVCSSFXLTDVDIQYADADYENLTTYKLFQQHVRPMLVKENPKVPVSKLMMLVAAKWRMF 494
++ + + D+D +++ DY LT YK F Q VRP++ +NPK+ VSK+MM++ AKWR F
Sbjct: 153 QLLEDWGMEDIDHVFSEEDYRTLTNYKAFSQFVRPLIAAKNPKIAVSKMMMVLGAKWREF 212
Query: 493 CETNPHLSTS 464
NP +S
Sbjct: 213 STNNPFKGSS 222
>U91543-1|AAC39923.1| 2000|Homo sapiens zinc-finger helicase
protein.
Length = 2000
Score = 72.1 bits (169), Expect = 2e-12
Identities = 28/61 (45%), Positives = 43/61 (70%)
Frame = -3
Query: 661 SFXLTDVDIQYADADYENLTTYKLFQQHVRPMLVKENPKVPVSKLMMLVAAKWRMFCETN 482
++ L DV+ +++ DY LT YK F Q +RP++ K+NPK+P+SK+M ++ AKWR F N
Sbjct: 141 TWGLEDVEHVFSEEDYHTLTNYKAFSQFMRPLIAKKNPKIPMSKMMTILGAKWREFSANN 200
Query: 481 P 479
P
Sbjct: 201 P 201
>U08379-1|AAC50228.1| 530|Homo sapiens Mi-2 autoantigen 240 kDa
protein protein.
Length = 530
Score = 72.1 bits (169), Expect = 2e-12
Identities = 28/61 (45%), Positives = 43/61 (70%)
Frame = -3
Query: 661 SFXLTDVDIQYADADYENLTTYKLFQQHVRPMLVKENPKVPVSKLMMLVAAKWRMFCETN 482
++ L DV+ +++ DY LT YK F Q +RP++ K+NPK+P+SK+M ++ AKWR F N
Sbjct: 21 TWGLEDVEHVFSEEDYHTLTNYKAFSQFMRPLIAKKNPKIPMSKMMTILGAKWREFSANN 80
Query: 481 P 479
P
Sbjct: 81 P 81
>AF006515-1|AAB87383.1| 1944|Homo sapiens CHD3 protein.
Length = 1944
Score = 72.1 bits (169), Expect = 2e-12
Identities = 28/61 (45%), Positives = 43/61 (70%)
Frame = -3
Query: 661 SFXLTDVDIQYADADYENLTTYKLFQQHVRPMLVKENPKVPVSKLMMLVAAKWRMFCETN 482
++ L DV+ +++ DY LT YK F Q +RP++ K+NPK+P+SK+M ++ AKWR F N
Sbjct: 141 TWGLEDVEHVFSEEDYHTLTNYKAFSQFMRPLIAKKNPKIPMSKMMTILGAKWREFSANN 200
Query: 481 P 479
P
Sbjct: 201 P 201
>AK127869-1|BAC87169.1| 1533|Homo sapiens protein ( Homo sapiens
cDNA FLJ45972 fis, clone PLACE7018304. ).
Length = 1533
Score = 31.1 bits (67), Expect = 4.3
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Frame = -2
Query: 215 LXLKIKFSKRKRTSSEEEQEG----SAVNSDSDAEFEQMLAEAEE 93
L K++ K+KR S+EE EG S+ + +S E E+M E EE
Sbjct: 654 LKAKLQRKKKKRKGSDEEDEGEEEESSSSEESSTEEEEMEEEEEE 698
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,499,325
Number of Sequences: 237096
Number of extensions: 1253086
Number of successful extensions: 4014
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3592
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3994
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8679165170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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