Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP05_T7_L14
         (732 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   5.2  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   5.2  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   5.2  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                22   6.8  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    21   9.0  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +2

Query: 608 VFVVRIRILYVNIGKXERGAHLFDCWHT 691
           + V+   + Y+ +GK   G HL   W T
Sbjct: 87  ILVMPFNVAYLLLGKWIFGIHLCKLWLT 114


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +2

Query: 608 VFVVRIRILYVNIGKXERGAHLFDCWHT 691
           + V+   + Y+ +GK   G HL   W T
Sbjct: 87  ILVMPFNVAYLLLGKWIFGIHLCKLWLT 114


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +2

Query: 608 VFVVRIRILYVNIGKXERGAHLFDCWHT 691
           + V+   + Y+ +GK   G HL   W T
Sbjct: 87  ILVMPFNVAYLLLGKWIFGIHLCKLWLT 114


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 8/34 (23%), Positives = 15/34 (44%)
 Frame = -3

Query: 580 HVRPMLVKENPKVPVSKLMMLVAAKWRMFCETNP 479
           +  P ++K+N   P + +  L    W+M     P
Sbjct: 220 YTAPEVIKQNRPTPAADIYSLGIVAWQMLFRKLP 253


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 248 RRDGAGRVLGLASTFPRHSGAFV 316
           RR+G   VL ++    RH+G F+
Sbjct: 226 RREGEFSVLQVSFNLQRHTGYFL 248


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,185
Number of Sequences: 438
Number of extensions: 2184
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22779405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)