Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP05_T7_L06
(787 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1408 - 26353389-26355191 244 5e-65
03_03_0094 + 14378953-14380728 243 1e-64
06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,713... 31 1.0
04_04_0876 - 29005543-29005630,29005841-29006596,29006939-29006955 30 2.4
12_01_0400 + 3169597-3170504,3170510-3171269 29 3.2
02_04_0562 - 23886272-23886357,23886456-23886571,23887045-238871... 29 3.2
01_01_0519 - 3817369-3817704 29 4.2
06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,805... 28 7.3
04_04_1188 + 31579833-31579914,31580001-31580176,31580822-315809... 28 7.3
03_05_0388 + 23726957-23727418,23730016-23730262,23731072-237312... 28 9.7
>07_03_1408 - 26353389-26355191
Length = 600
Score = 244 bits (598), Expect = 5e-65
Identities = 113/236 (47%), Positives = 162/236 (68%), Gaps = 1/236 (0%)
Frame = -3
Query: 749 GEKEGMVTMHDILDAQWSYENHKDETYLRRVIKPLEGLLIAHKRIFIKDSAVNAVCYGAK 570
GE++ MVTMHD++DA+W+ +N+ DETYLRR++ PLE LL ++KR+ +KDSAVNA+CYGAK
Sbjct: 269 GEQDNMVTMHDVMDARWAMDNYNDETYLRRIVMPLEVLLTSYKRLVVKDSAVNAICYGAK 328
Query: 569 VLLPGILRYEDGIEVDQEIVIVTTKGEAVALAVALMTTSTMASCDHGVAAKLKRVIMERD 390
+++PG+LR+E+ I+V +E+V++TTKGEA+A+ +A MTT+ MA+CDHG AK+KRV+M+RD
Sbjct: 329 LMIPGLLRFENDIDVGEEVVLMTTKGEAIAIGIAEMTTAVMATCDHGAVAKIKRVVMDRD 388
Query: 389 TYPRKWGLGPKASQKKILIQQGKLDKYGKPNENTPKEWLNSYVNYNVKKEPENGDG-VEE 213
TYPRKWGLGP A +KK ++ +G LDK+GKPNE TP EW+ NV P GD +
Sbjct: 389 TYPRKWGLGPVALKKKKMVAEGLLDKHGKPNEKTPAEWIR-----NVAL-PTGGDAMIAS 442
Query: 212 GSRKRTASTANAEDPDVSIEVKQEXXXXXXKRDSEAPAEADATMDTSESPETAEQP 45
+ + AE V+ E +E +D E A+ + +A P
Sbjct: 443 IAAAPEEAKVKAEQDVVATEEVKEKKKKKKHKDEEDAADEGRKRKIEDDDASASVP 498
>03_03_0094 + 14378953-14380728
Length = 591
Score = 243 bits (594), Expect = 1e-64
Identities = 109/205 (53%), Positives = 153/205 (74%), Gaps = 2/205 (0%)
Frame = -3
Query: 749 GEKEGMVTMHDILDAQWSYENHKDETYLRRVIKPLEGLLIAHKRIFIKDSAVNAVCYGAK 570
GE + MVTMHD++DA+W+ +N DE+YLRR++ PLE LL ++KR+ +KDSAVNA+CYGAK
Sbjct: 273 GETDNMVTMHDVMDARWAMDNFNDESYLRRIVMPLEVLLTSYKRLVVKDSAVNAICYGAK 332
Query: 569 VLLPGILRYEDGIEVDQEIVIVTTKGEAVALAVALMTTSTMASCDHGVAAKLKRVIMERD 390
+++PG+LR+E+ IEV +E+V++TTKGEA+A+ +A MTT+ MA+CDHG AK+KRV+M+RD
Sbjct: 333 LMIPGLLRFENEIEVGEEVVLMTTKGEAIAIGIAEMTTAVMATCDHGAVAKIKRVVMDRD 392
Query: 389 TYPRKWGLGPKASQKKILIQQGKLDKYGKPNENTPKEWLNSYVNYNVKKEPENGDGVEEG 210
TYPRKWGLGP A +KK ++ +G LDK+GKPNE TP EWL + V P GD + G
Sbjct: 393 TYPRKWGLGPVALKKKKMVAEGLLDKHGKPNEKTPSEWLRNAV------LPAGGDAMIAG 446
Query: 209 --SRKRTASTANAEDPDVSIEVKQE 141
+ E+ DV+ E K++
Sbjct: 447 IAAAPEPEKPKVKEEADVAEETKEK 471
>06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,
7139996-7140076,7140805-7140895,7141242-7141330,
7141749-7141802,7141906-7142085,7142175-7142237,
7142575-7142705,7142807-7142900,7143343-7143684,
7143957-7144348,7145010-7148487,7149101-7149187,
7149324-7149367,7149495-7149591,7150429-7150572
Length = 1873
Score = 31.1 bits (67), Expect = 1.0
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = -3
Query: 245 KEPENGDGVEEGSRKRTASTANAEDPDVSIEVKQEXXXXXXKRDSEAPAEADATMDTS-E 69
K PE+ E+ S K A T EDP V++E + E + S P + +A ++ E
Sbjct: 1164 KLPEDSTTFEKPSEKDDAGTKQTEDP-VTLEKEPE-----EDKGSVEPTQDNAGLEKPLE 1217
Query: 68 SPETAEQPADDSV 30
E + +P++DSV
Sbjct: 1218 EDEASAKPSEDSV 1230
>04_04_0876 - 29005543-29005630,29005841-29006596,29006939-29006955
Length = 286
Score = 29.9 bits (64), Expect = 2.4
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = -3
Query: 749 GEKEGMVTMHDILDAQWSY 693
GE++ MVTMHD++DA+ +
Sbjct: 243 GEQDNMVTMHDVMDARQEF 261
>12_01_0400 + 3169597-3170504,3170510-3171269
Length = 555
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 349 CEAFGPRPHFLGYVSRSIMTRLSFAATP 432
CEA P H Y +R + R+S AATP
Sbjct: 212 CEATSPVDHLAYYFARGLKLRISGAATP 239
>02_04_0562 -
23886272-23886357,23886456-23886571,23887045-23887127,
23887683-23887829,23887946-23887993,23888166-23888384,
23889370-23889541,23889636-23889700,23890386-23890512,
23891358-23891450,23891520-23891629,23891722-23891868,
23892161-23892473,23892580-23893178
Length = 774
Score = 29.5 bits (63), Expect = 3.2
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Frame = -3
Query: 200 RTASTANAEDPDVSIEVKQEXXXXXXKRDSEA-PAEADATMD--TSESPETAEQPADDSV 30
RTASTA A P + IE +Q KR EA P E D ++ +S + + +SV
Sbjct: 112 RTASTATAGQPKLDIEDEQSEDQKQNKRKKEASPEECDQAVEGLSSAKAKAKAKQVQESV 171
Query: 29 R 27
+
Sbjct: 172 K 172
>01_01_0519 - 3817369-3817704
Length = 111
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = -2
Query: 783 IELRRVRS-GISGREGRHGHDARHPRC 706
+ELR RS G+ G + RHG A H RC
Sbjct: 40 LELRHSRSVGLIGLQRRHGDGAGHTRC 66
>06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,
8057595-8058314,8058404-8058603,8058988-8059172,
8059287-8059354,8059432-8060246,8060502-8060599,
8060702-8060887,8061358-8061538,8061651-8061812,
8061894-8061937,8062059-8062115,8062409-8062505,
8062614-8062786,8062868-8063081,8063270-8063395,
8064072-8064188,8064459-8064566,8064729-8064898,
8065049-8065127,8065211-8065285,8065845-8065942,
8066030-8066137,8066238-8066295,8066527-8066631,
8067461-8069516,8069804-8070697,8070896-8071852,
8072022-8072075,8072157-8072222,8072294-8073472,
8073868-8075598,8075764-8075829,8076763-8077788,
8077893-8078041
Length = 4264
Score = 28.3 bits (60), Expect = 7.3
Identities = 21/92 (22%), Positives = 40/92 (43%)
Frame = -3
Query: 692 ENHKDETYLRRVIKPLEGLLIAHKRIFIKDSAVNAVCYGAKVLLPGILRYEDGIEVDQEI 513
E D+++L ++ E +D C G V + G ED +EV++++
Sbjct: 3388 EKQMDDSHLPAALQSTESSQPTEHAAPTQDDGNGLQCEGTTVDVSG--SKEDIMEVEEKL 3445
Query: 512 VIVTTKGEAVALAVALMTTSTMASCDHGVAAK 417
+ + + L VAL +T + +H V A+
Sbjct: 3446 IDDISGSPSSHLPVALKSTESNQPAEHAVPAE 3477
>04_04_1188 +
31579833-31579914,31580001-31580176,31580822-31580923,
31581015-31581245,31581821-31581922,31582092-31582184,
31582275-31582379,31582455-31582514,31582621-31582698,
31582778-31582924,31583011-31583109,31583178-31583267,
31583360-31583451,31583529-31583646,31583783-31583871,
31583998-31584088,31584203-31584294,31584442-31584749,
31584866-31584897
Length = 728
Score = 28.3 bits (60), Expect = 7.3
Identities = 26/111 (23%), Positives = 47/111 (42%), Gaps = 7/111 (6%)
Frame = -3
Query: 341 ILIQQGKLDKYGKPN-----ENTPKEWLNSYVNYNVKKEPENGDGVE-EGSRKRTASTAN 180
+ + +GK K GK N E V V E V+ + K+ S+++
Sbjct: 17 VSVSEGKSGKKGKRNAEDEIEKAVSAKKQKTVREKVVPSKEEAKKVKKQPPPKKVESSSS 76
Query: 179 AEDPDVSIE-VKQEXXXXXXKRDSEAPAEADATMDTSESPETAEQPADDSV 30
ED S E VK + + + PA+ +++ D+S+ + ++PA V
Sbjct: 77 EEDSSESEEEVKAQPKKTVQPKKAAQPAKEESSDDSSDDSSSDDEPAKKPV 127
>03_05_0388 +
23726957-23727418,23730016-23730262,23731072-23731220,
23731313-23731597,23731665-23731889,23734251-23734445
Length = 520
Score = 27.9 bits (59), Expect = 9.7
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = -3
Query: 338 LIQQGKLDKYGK-PNENTPKEWLNSY--VNYNVKKEPENGDGVEEGSRKRTASTANAEDP 168
L++ D G+ P + +E L Y V++ +EP+N D VEEG+ + +E+P
Sbjct: 4 LVENFDADDLGEMPQNHYNEEQLIPYSDVSHPYNEEPDNMDNVEEGNPYIQQVSLYSEEP 63
Query: 167 D 165
+
Sbjct: 64 E 64
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,788,132
Number of Sequences: 37544
Number of extensions: 402168
Number of successful extensions: 1225
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1225
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2115411120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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