Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP05_T7_K12
(791 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB1E7.06c |eme1||Holliday junction resolvase subunit Eme1|Sch... 32 0.082
SPAC22A12.08c |||cardiolipin synthase/ hydrolase fusion protein ... 28 1.3
SPBPB7E8.02 |||PSP1 family protein|Schizosaccharomyces pombe|chr... 28 1.3
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 27 2.3
SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6 |Schizosacc... 27 3.1
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 3.1
SPBC29A3.14c |trt1||telomerase reverse transcriptase 1 protein T... 27 3.1
SPAC23G3.12c |||serine protease |Schizosaccharomyces pombe|chr 1... 26 5.4
SPBC32C12.02 |ste11|aff1, stex|transcription factor Ste11|Schizo... 26 5.4
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 26 5.4
SPBC16C6.09 |ogm4|oma4|protein O-mannosyltransferase Ogm4|Schizo... 26 7.1
SPAC458.03 |||nuclear telomere cap complex subunit |Schizosaccha... 26 7.1
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 26 7.1
SPAC57A7.07c |||homocysteine methyltransferase |Schizosaccharomy... 25 9.4
SPAC13G7.10 |mug152||transcription factor |Schizosaccharomyces p... 25 9.4
SPAC19A8.12 |dcp2||mRNA decapping complex subunit Dcp2|Schizosac... 25 9.4
SPCC1450.09c |||phospholipase |Schizosaccharomyces pombe|chr 3||... 25 9.4
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 25 9.4
>SPAPB1E7.06c |eme1||Holliday junction resolvase subunit
Eme1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 738
Score = 32.3 bits (70), Expect = 0.082
Identities = 31/86 (36%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Frame = -1
Query: 716 SSHPPLRSRXHQPDHQ-IPRFHTPTTPDLTSISINPLTP-Y*KEFAPGLKPPLSSEAPSA 543
+S PP S QP HQ FHTPT P T +S +P + + PLS +A S
Sbjct: 120 NSSPP-NSLSSQPKHQEFHLFHTPTIPRTTQLSSKTSSPIVIPDDNEQVASPLSKKAAS- 177
Query: 542 YLTPSSLGMXKGVSPPYFQVNDESQA 465
LT S L + SPP V +S +
Sbjct: 178 -LTSSPLKDFQS-SPPLSTVLQKSHS 201
>SPAC22A12.08c |||cardiolipin synthase/ hydrolase fusion protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 570
Score = 28.3 bits (60), Expect = 1.3
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 104 RNMARIYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVVVQYG 232
R +A Y+ + LGG++ S+ EK F + N DV+ + G
Sbjct: 112 RALADKYKHVLVLGGKDNSVRETAEKYGFKSVINELDVIAKLG 154
>SPBPB7E8.02 |||PSP1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 749
Score = 28.3 bits (60), Expect = 1.3
Identities = 22/80 (27%), Positives = 37/80 (46%)
Frame = -1
Query: 764 HPFIXSXXYWRSRPYASSHPPLRSRXHQPDHQIPRFHTPTTPDLTSISINPLTPY*KEFA 585
HPF+ ++ P+A+ P L + H P +P + + S+NP TP +
Sbjct: 233 HPFMQES---KTSPFATRRPSLNTDHHGR----PILLSPL--NYQNSSLNPSTPSPFGGS 283
Query: 584 PGLKPPLSSEAPSAYLTPSS 525
P + PP+S+ +P P S
Sbjct: 284 PVMHPPVSNLSPRTPAVPMS 303
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 27.5 bits (58), Expect = 2.3
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = -3
Query: 756 HXXAXXLAVSPLCIKPPSPAISXTSTRSSNPPIPYTNHPRLNIHFHQSPDAVLE 595
H A ++V P + P P+IS T+T SS ++ P HF +P LE
Sbjct: 259 HGPAKQISVQPS--EHPKPSISTTTTGSSYRSAESSHAPTTPDHFKLTPLTKLE 310
>SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 745
Score = 27.1 bits (57), Expect = 3.1
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = -2
Query: 259 CYFSTPPFDTVLYDNIRTVLKDNKTALLSASI 164
CY P + + L ++I+T+L DN ++ A++
Sbjct: 168 CYSLDPSYKSQLEEHIKTLLSDNSPIVVPAAL 199
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 27.1 bits (57), Expect = 3.1
Identities = 22/78 (28%), Positives = 31/78 (39%), Gaps = 2/78 (2%)
Frame = -1
Query: 725 PYASSHPPLRSRXHQPDHQIPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPS 546
P +S PP+ S+ +P P P + S L P + PP S+AP
Sbjct: 152 PSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPV 211
Query: 545 AYLT--PSSLGMXKGVSP 498
A + PSS G +P
Sbjct: 212 ANTSSRPSSFAPPAGHAP 229
>SPBC29A3.14c |trt1||telomerase reverse transcriptase 1 protein Trt1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 988
Score = 27.1 bits (57), Expect = 3.1
Identities = 20/78 (25%), Positives = 34/78 (43%)
Frame = -2
Query: 358 KVKIADNNLVTHKELALKVSSIIGTRVYVFDPSCYFSTPPFDTVLYDNIRTVLKDNKTAL 179
K K+ D V K + +S T+ +V + YF PF+ V+ +K + T
Sbjct: 608 KKKLKDPEFVIRKYATIHATSDRATKNFVSEAFSYFDMVPFEKVVQ---LLSMKTSDTLF 664
Query: 178 LSASIQASLPSSEIYRQL 125
+ + SSEI++ L
Sbjct: 665 VDFVDYWTKSSSEIFKML 682
>SPAC23G3.12c |||serine protease |Schizosaccharomyces pombe|chr
1|||Manual
Length = 996
Score = 26.2 bits (55), Expect = 5.4
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -2
Query: 733 GLALMHQATLPCDLGYINPIIKSPDSIHQPPQT*HPFPS 617
GLA+ ++T+P DLG + I DSI P + H P+
Sbjct: 561 GLAVTSRSTVPYDLGDLT--ITVADSIQIPAEVVHLHPT 597
>SPBC32C12.02 |ste11|aff1, stex|transcription factor
Ste11|Schizosaccharomyces pombe|chr 2|||Manual
Length = 468
Score = 26.2 bits (55), Expect = 5.4
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = -1
Query: 719 ASSHPPLRSRXHQPDHQIPRFHTPTTPDLTSISINPLTP-----Y*KEFAPGLKPPLSSE 555
++S P S H P P+TP + SI+P TP Y + A L PLS
Sbjct: 280 SNSDSPELSADKVLSHCSPIDARPSTPSCPNASISPKTPNTGDHYGFDGAEYLGTPLSVG 339
Query: 554 APSAYL 537
+ +AYL
Sbjct: 340 STTAYL 345
>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 26.2 bits (55), Expect = 5.4
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -2
Query: 469 KLRALLVVIPRILRSPPPTHPLIEDV 392
KLR++L I ++LR P P PL+ +
Sbjct: 105 KLRSVLEQILQLLREPNPDDPLVASI 130
>SPBC16C6.09 |ogm4|oma4|protein O-mannosyltransferase
Ogm4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 778
Score = 25.8 bits (54), Expect = 7.1
Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 4/67 (5%)
Frame = -1
Query: 776 QCXGHPFIXSXXYWRSRPYASSHPPLRSRXHQPDHQ---IPRFHTPTTPDLTSISI-NPL 609
Q G+ F YW P PP+ ++ + P I H T DL + + +P
Sbjct: 378 QVTGYQFDDENNYWMILPADHYDPPIEAKLNVPVKNMDYIKLHHVGTNTDLMTHDVASPY 437
Query: 608 TPY*KEF 588
P +EF
Sbjct: 438 HPTNEEF 444
>SPAC458.03 |||nuclear telomere cap complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 868
Score = 25.8 bits (54), Expect = 7.1
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -1
Query: 146 LRDLPPVGRSSPCFFRLLWSLRKILIPYSSQFW 48
L++L +G SPC RL L +++P FW
Sbjct: 21 LKELQHIGVPSPCNLRLYHELISVIVP---TFW 50
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 25.8 bits (54), Expect = 7.1
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = -3
Query: 711 PPSPAISXTSTRSSNPPIPYTNHPRLNIHFHQSPDAVLEGVRAGVKASVVIRGSISVSHP 532
P +P + TST S++ PIP T+ + + P S+ GS S+S P
Sbjct: 190 PITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPTT---STSCTTSTSIPTGGSSSLSTP 246
Query: 531 L 529
+
Sbjct: 247 I 247
>SPAC57A7.07c |||homocysteine methyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 308
Score = 25.4 bits (53), Expect = 9.4
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -2
Query: 334 LVTHKELALKVSSIIGTRVYVFDPSCY 254
+V H E LKV II T Y D S Y
Sbjct: 37 VVKHHEEFLKVCDIISTFTYQLDASIY 63
>SPAC13G7.10 |mug152||transcription factor |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 390
Score = 25.4 bits (53), Expect = 9.4
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 474 ITSFAPY*SSFHAYSAPLLQLTPSSKTSS 388
+ SF PY S F A P L ++PS+ +S
Sbjct: 302 LQSFHPYESLFSAGQPPSLPISPSTSQNS 330
>SPAC19A8.12 |dcp2||mRNA decapping complex subunit
Dcp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 25.4 bits (53), Expect = 9.4
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -3
Query: 723 LCIKPPSPAISXTSTRSSNPPIPYTNHPRLNIHFHQS 613
L + P +P+ S S N + TN P LN HF QS
Sbjct: 346 LGLDPKNPSASFPRVVSQNNML--TNKPVLNNHFQQS 380
>SPCC1450.09c |||phospholipase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 25.4 bits (53), Expect = 9.4
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = -2
Query: 247 TPPFDTVLYDNIRTVLKDNKTALLSASIQASLPSSEIYRQLVDPRHVSSDSFGVCV 80
TPP V + N + N T + ++ +L S I V +SDSF VCV
Sbjct: 520 TPPL-VVYFPNYPWTMYANVTTY-TVQLEDTLSSGMIENAAVAATQNNSDSFAVCV 573
>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 25.4 bits (53), Expect = 9.4
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 119 IYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVV 220
++Q A+ LG RS RC KSSF+ + DVV
Sbjct: 33 LHQQAL-LGRNGRSSKRCSPKSSFIRNSPKIDVV 65
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,051,872
Number of Sequences: 5004
Number of extensions: 62444
Number of successful extensions: 220
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 219
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 385381248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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