SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP05_T7_K12
         (791 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC033821-1|AAH33821.1|  616|Homo sapiens chromosome 16 open read...    34   0.68 
BC032400-1|AAH32400.1|  553|Homo sapiens C16orf44 protein protein.     34   0.68 
AK074056-1|BAB84882.1|  296|Homo sapiens FLJ00127 protein protein.     33   0.89 
DQ986374-1|ABJ15760.1|  447|Homo sapiens T-box transcription fac...    33   1.2  
AK022605-1|BAB14124.1|  616|Homo sapiens protein ( Homo sapiens ...    33   1.2  
AB033111-1|BAA86599.1|  785|Homo sapiens KIAA1285 protein protein.     31   3.6  
BT009758-1|AAP88760.1|  577|Homo sapiens protein tyrosine phosph...    30   8.3  
BC089042-1|AAH89042.1| 1636|Homo sapiens protein tyrosine phosph...    30   8.3  
BC027711-1|AAH27711.2| 1320|Homo sapiens PTPN23 protein protein.       30   8.3  
BC004881-1|AAH04881.2|  619|Homo sapiens PTPN23 protein protein.       30   8.3  
AL110210-1|CAB53676.1|  990|Homo sapiens hypothetical protein pr...    30   8.3  
AK131081-1|BAC85131.1|  440|Homo sapiens FLJ00280 protein protein.     30   8.3  
AK127846-1|BAC87158.1|  483|Homo sapiens protein ( Homo sapiens ...    30   8.3  
AK126216-1|BAC86490.1|  135|Homo sapiens protein ( Homo sapiens ...    30   8.3  
AF290614-1|AAK28025.1| 1636|Homo sapiens protein tyrosine phosph...    30   8.3  
AB025194-1|BAB19280.1| 1636|Homo sapiens protein tyrosine phosph...    30   8.3  

>BC033821-1|AAH33821.1|  616|Homo sapiens chromosome 16 open reading
           frame 44 protein.
          Length = 616

 Score = 33.9 bits (74), Expect = 0.68
 Identities = 17/36 (47%), Positives = 21/36 (58%)
 Frame = +2

Query: 587 RTPSSTASGD*WKWMLSLGWLVYGIGGFDDRVDVXE 694
           R P +TA G  W  M SLG  +Y IGG DD ++  E
Sbjct: 476 RRPMTTARG--WHSMCSLGDSIYSIGGSDDNIESME 509


>BC032400-1|AAH32400.1|  553|Homo sapiens C16orf44 protein protein.
          Length = 553

 Score = 33.9 bits (74), Expect = 0.68
 Identities = 17/36 (47%), Positives = 21/36 (58%)
 Frame = +2

Query: 587 RTPSSTASGD*WKWMLSLGWLVYGIGGFDDRVDVXE 694
           R P +TA G  W  M SLG  +Y IGG DD ++  E
Sbjct: 413 RRPMTTARG--WHSMCSLGDSIYSIGGSDDNIESME 446


>AK074056-1|BAB84882.1|  296|Homo sapiens FLJ00127 protein protein.
          Length = 296

 Score = 33.5 bits (73), Expect = 0.89
 Identities = 17/36 (47%), Positives = 21/36 (58%)
 Frame = +2

Query: 587 RTPSSTASGD*WKWMLSLGWLVYGIGGFDDRVDVXE 694
           R P +TA G  W  M SLG  +Y IGG DD ++  E
Sbjct: 156 RRPMTTARG--WHSMSSLGDSIYSIGGSDDNIESME 189


>DQ986374-1|ABJ15760.1|  447|Homo sapiens T-box transcription factor
           TBX20 isoform A protein.
          Length = 447

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 14/42 (33%), Positives = 24/42 (57%)
 Frame = -3

Query: 711 PPSPAISXTSTRSSNPPIPYTNHPRLNIHFHQSPDAVLEGVR 586
           P +P+   +S + S P  P  + PR + +F Q P A ++G+R
Sbjct: 396 PLTPSAIASSMQGSGPTFPSFHMPRYHHYFQQGPYAAIQGLR 437


>AK022605-1|BAB14124.1|  616|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12543 fis, clone NT2RM4000590, weakly similar to
           RING CANAL PROTEIN. ).
          Length = 616

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 17/36 (47%), Positives = 21/36 (58%)
 Frame = +2

Query: 587 RTPSSTASGD*WKWMLSLGWLVYGIGGFDDRVDVXE 694
           R P +TA G  W  M SLG  +Y IGG DD ++  E
Sbjct: 476 RRPMTTARG--WHSMCSLGDGIYSIGGSDDNIESME 509


>AB033111-1|BAA86599.1|  785|Homo sapiens KIAA1285 protein protein.
          Length = 785

 Score = 31.5 bits (68), Expect = 3.6
 Identities = 15/57 (26%), Positives = 28/57 (49%)
 Frame = -1

Query: 725 PYASSHPPLRSRXHQPDHQIPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSE 555
           P A++   +    H P HQ    H+P  P+   ++++P  P   +  P L+ P+S +
Sbjct: 132 PPAAAEQEVSLLSHSPHHQEAPVHSPEAPEKDPLTLSPTVPE-TDMDPLLQSPVSQK 187


>BT009758-1|AAP88760.1|  577|Homo sapiens protein tyrosine
           phosphatase, non-receptor type 23 protein.
          Length = 577

 Score = 30.3 bits (65), Expect = 8.3
 Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
 Frame = -1

Query: 668 IPRFHTPTTPDLTSISINPLT-PY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVSPPY 492
           +P    P +  + S S  PL+ P  +   P  +PP+  EAPS+    SSL +   ++P  
Sbjct: 470 LPPASLPESTPIPSSSPPPLSSPLPEAPQPKEEPPVP-EAPSSGPPSSSLELLASLTPEA 528

Query: 491 FQVNDESQASRLISRHS 441
           F ++   +  + +S+H+
Sbjct: 529 FSLDSSLRGKQRMSKHN 545


>BC089042-1|AAH89042.1| 1636|Homo sapiens protein tyrosine
            phosphatase, non-receptor type 23 protein.
          Length = 1636

 Score = 30.3 bits (65), Expect = 8.3
 Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
 Frame = -1

Query: 668  IPRFHTPTTPDLTSISINPLT-PY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVSPPY 492
            +P    P +  + S S  PL+ P  +   P  +PP+  EAPS+    SSL +   ++P  
Sbjct: 1529 LPPASLPESTPIPSSSPPPLSSPLPEAPQPKEEPPVP-EAPSSGPPSSSLELLASLTPEA 1587

Query: 491  FQVNDESQASRLISRHS 441
            F ++   +  + +S+H+
Sbjct: 1588 FSLDSSLRGKQRMSKHN 1604


>BC027711-1|AAH27711.2| 1320|Homo sapiens PTPN23 protein protein.
          Length = 1320

 Score = 30.3 bits (65), Expect = 8.3
 Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
 Frame = -1

Query: 668  IPRFHTPTTPDLTSISINPLT-PY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVSPPY 492
            +P    P +  + S S  PL+ P  +   P  +PP+  EAPS+    SSL +   ++P  
Sbjct: 1213 LPPASLPESTPIPSSSPPPLSSPLPEAPQPKEEPPVP-EAPSSGPPSSSLELLASLTPEA 1271

Query: 491  FQVNDESQASRLISRHS 441
            F ++   +  + +S+H+
Sbjct: 1272 FSLDSSLRGKQRMSKHN 1288


>BC004881-1|AAH04881.2|  619|Homo sapiens PTPN23 protein protein.
          Length = 619

 Score = 30.3 bits (65), Expect = 8.3
 Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
 Frame = -1

Query: 668 IPRFHTPTTPDLTSISINPLT-PY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVSPPY 492
           +P    P +  + S S  PL+ P  +   P  +PP+  EAPS+    SSL +   ++P  
Sbjct: 512 LPPASLPESTPIPSSSPPPLSSPLPEAPQPKEEPPVP-EAPSSGPPSSSLELLASLTPEA 570

Query: 491 FQVNDESQASRLISRHS 441
           F ++   +  + +S+H+
Sbjct: 571 FSLDSSLRGKQRMSKHN 587


>AL110210-1|CAB53676.1|  990|Homo sapiens hypothetical protein
            protein.
          Length = 990

 Score = 30.3 bits (65), Expect = 8.3
 Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
 Frame = -1

Query: 668  IPRFHTPTTPDLTSISINPLT-PY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVSPPY 492
            +P    P +  + S S  PL+ P  +   P  +PP+  EAPS+    SSL +   ++P  
Sbjct: 883  LPPASLPESTPIPSSSPPPLSSPLPEAPQPKEEPPVP-EAPSSGPPSSSLELLASLTPEA 941

Query: 491  FQVNDESQASRLISRHS 441
            F ++   +  + +S+H+
Sbjct: 942  FSLDSSLRGKQRMSKHN 958


>AK131081-1|BAC85131.1|  440|Homo sapiens FLJ00280 protein protein.
          Length = 440

 Score = 30.3 bits (65), Expect = 8.3
 Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
 Frame = -1

Query: 725 PYASSHPPLRSRXHQPDHQIPRFHTPTTPDLTSISINPLTPY*KEFAPGLKP-PLSSEAP 549
           P   + PP R+  + P H     HTPT+ D T  S N L P     +P   P P +  +P
Sbjct: 33  PCPGTLPPPRTHSYLPGHSPLLGHTPTSRD-TPPSRNTLPPPWMLPSPRTLPSPRTLPSP 91

Query: 548 SAYLTPSSLGMXKGVSP 498
               TP +     G SP
Sbjct: 92  RTLPTPGTHFYLPGHSP 108


>AK127846-1|BAC87158.1|  483|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45949 fis, clone PLACE7007973. ).
          Length = 483

 Score = 30.3 bits (65), Expect = 8.3
 Identities = 13/47 (27%), Positives = 22/47 (46%)
 Frame = -3

Query: 717 IKPPSPAISXTSTRSSNPPIPYTNHPRLNIHFHQSPDAVLEGVRAGV 577
           + PP P +  T  +   PP P + +  L++H   S      G R+G+
Sbjct: 125 VNPPQPPLPETKEKEQAPPAPSSLYRTLSLHGSASTYTRPSGPRSGI 171


>AK126216-1|BAC86490.1|  135|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44228 fis, clone THYMU3006371. ).
          Length = 135

 Score = 30.3 bits (65), Expect = 8.3
 Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
 Frame = -1

Query: 710 HPPLRSRXHQPDHQIPRFHTPTTPDLTSISIN--PLTPY*KEFAPGLKPPLSSEAP 549
           HP   +  H   H     HTP+ P L S+     P +P   +  PG  PP   E+P
Sbjct: 66  HPNRHTHAHTHTHTHTHTHTPSFPLLLSLGTGAPPCSPCSTQ-PPGRSPPTFDESP 120


>AF290614-1|AAK28025.1| 1636|Homo sapiens protein tyrosine phosphatase
            TD14 protein.
          Length = 1636

 Score = 30.3 bits (65), Expect = 8.3
 Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
 Frame = -1

Query: 668  IPRFHTPTTPDLTSISINPLT-PY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVSPPY 492
            +P    P +  + S S  PL+ P  +   P  +PP+  EAPS+    SSL +   ++P  
Sbjct: 1529 LPPASLPESTPIPSSSPPPLSSPLPEAPQPKEEPPVP-EAPSSGPPSSSLELLASLTPEA 1587

Query: 491  FQVNDESQASRLISRHS 441
            F ++   +  + +S+H+
Sbjct: 1588 FSLDSSLRGKQRMSKHN 1604


>AB025194-1|BAB19280.1| 1636|Homo sapiens protein tyrosine phosphatase
            HD-PTP protein.
          Length = 1636

 Score = 30.3 bits (65), Expect = 8.3
 Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
 Frame = -1

Query: 668  IPRFHTPTTPDLTSISINPLT-PY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVSPPY 492
            +P    P +  + S S  PL+ P  +   P  +PP+  EAPS+    SSL +   ++P  
Sbjct: 1529 LPPASLPESTPIPSSSPPPLSSPLPEAPQPKEEPPVP-EAPSSGPPSSSLELLASLTPEA 1587

Query: 491  FQVNDESQASRLISRHS 441
            F ++   +  + +S+H+
Sbjct: 1588 FSLDSSLRGKQRMSKHN 1604


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,094,807
Number of Sequences: 237096
Number of extensions: 2492495
Number of successful extensions: 10948
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 10247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10937
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9701808132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -