Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP05_T7_K08
(826 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC111727-1|AAI11728.1| 1077|Homo sapiens transcription elongatio... 35 0.41
AF017789-1|AAB80727.1| 1098|Homo sapiens putative transcription ... 35 0.41
AB209910-1|BAD93147.1| 1081|Homo sapiens transcription elongatio... 35 0.41
U91543-1|AAC39923.1| 2000|Homo sapiens zinc-finger helicase prot... 32 2.9
L07518-1|AAB61945.1| 505|Homo sapiens mucin protein. 32 2.9
BC110648-1|AAI10649.1| 661|Homo sapiens CHD3 protein protein. 32 2.9
AF259792-1|AAG36928.1| 1486|Homo sapiens p250R protein. 32 2.9
AF006515-1|AAB87383.1| 1944|Homo sapiens CHD3 protein. 32 2.9
CR456522-1|CAG30408.1| 931|Homo sapiens MKL1 protein. 31 5.1
BC115039-1|AAI15040.1| 798|Homo sapiens MKL1 protein protein. 31 5.1
L40992-1|AAA89072.1| 440|Homo sapiens core-binding factor, runt... 31 6.7
AL591545-3|CAI40666.1| 1736|Homo sapiens RP11-419L10.1 protein. 31 6.7
AL591545-2|CAI40664.1| 1485|Homo sapiens RP11-419L10.1 protein. 31 6.7
AL358135-4|CAI13532.1| 589|Homo sapiens runt-related transcript... 31 6.7
AL358135-3|CAI13531.1| 521|Homo sapiens runt-related transcript... 31 6.7
AL358135-2|CAI13528.1| 507|Homo sapiens runt-related transcript... 31 6.7
AL358135-1|CAI13529.1| 440|Homo sapiens runt-related transcript... 31 6.7
AL355297-2|CAH71534.1| 1736|Homo sapiens RP11-419L10.1 protein. 31 6.7
AL162578-3|CAI40014.1| 1736|Homo sapiens RP11-419L10.1 protein. 31 6.7
AL161907-4|CAI19641.1| 589|Homo sapiens runt-related transcript... 31 6.7
AL161907-3|CAI19639.1| 521|Homo sapiens runt-related transcript... 31 6.7
AL161907-2|CAI19638.1| 507|Homo sapiens runt-related transcript... 31 6.7
AL161907-1|CAI19637.1| 440|Homo sapiens runt-related transcript... 31 6.7
AL096865-5|CAI19932.1| 589|Homo sapiens runt-related transcript... 31 6.7
AL096865-4|CAI19931.1| 521|Homo sapiens runt-related transcript... 31 6.7
AL096865-2|CAI19925.1| 507|Homo sapiens runt-related transcript... 31 6.7
AL096865-1|CAI19926.1| 440|Homo sapiens runt-related transcript... 31 6.7
AL049820-4|CAI42308.1| 1736|Homo sapiens RP11-419L10.1 protein. 31 6.7
AL049820-2|CAI42305.1| 1485|Homo sapiens RP11-419L10.1 protein. 31 6.7
AF521671-1|AAN03447.1| 2165|Homo sapiens SWI/SNF chromatin remod... 31 6.7
AF468300-1|AAL76077.1| 1740|Homo sapiens BRG1-binding protein EL... 31 6.7
AF253515-1|AAN70985.1| 1957|Homo sapiens BAF250b subunit protein. 31 6.7
AF001450-2|AAB65158.1| 507|Homo sapiens core binding factor alp... 31 6.7
AF001450-1|AAB65159.2| 521|Homo sapiens core binding factor alp... 31 6.7
AB033061-1|BAA86549.1| 1485|Homo sapiens KIAA1235 protein protein. 31 6.7
>BC111727-1|AAI11728.1| 1077|Homo sapiens transcription elongation
regulator 1 protein.
Length = 1077
Score = 34.7 bits (76), Expect = 0.41
Identities = 27/75 (36%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
Frame = -2
Query: 735 IXXSRPYASSHPXPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPG-----L 571
+ S P SS P PA+S TST SS P T TT TS++ TP ++ P
Sbjct: 256 VGASTPTTSS-PAPAVS-TSTSSSTPSSTTSTTTTATSVAQTVSTPTTQDQTPSSAVSVA 313
Query: 570 KPPLSSEAPSAYLTP 526
P +S P+ TP
Sbjct: 314 TPTVSVSTPAPTATP 328
>AF017789-1|AAB80727.1| 1098|Homo sapiens putative transcription
factor CA150 protein.
Length = 1098
Score = 34.7 bits (76), Expect = 0.41
Identities = 27/75 (36%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
Frame = -2
Query: 735 IXXSRPYASSHPXPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPG-----L 571
+ S P SS P PA+S TST SS P T TT TS++ TP ++ P
Sbjct: 256 VGASTPTTSS-PAPAVS-TSTSSSTPSSTTSTTTTATSVAQTVSTPTTQDQTPSSAVSVA 313
Query: 570 KPPLSSEAPSAYLTP 526
P +S P+ TP
Sbjct: 314 TPTVSVSTPARTATP 328
>AB209910-1|BAD93147.1| 1081|Homo sapiens transcription elongation
regulator 1 variant protein.
Length = 1081
Score = 34.7 bits (76), Expect = 0.41
Identities = 27/75 (36%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
Frame = -2
Query: 735 IXXSRPYASSHPXPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPG-----L 571
+ S P SS P PA+S TST SS P T TT TS++ TP ++ P
Sbjct: 260 VGASTPTTSS-PAPAVS-TSTSSSTPSSTTSTTTTATSVAQTVSTPTTQDQTPSSAVSVA 317
Query: 570 KPPLSSEAPSAYLTP 526
P +S P+ TP
Sbjct: 318 TPTVSVSTPAPTATP 332
>U91543-1|AAC39923.1| 2000|Homo sapiens zinc-finger helicase protein.
Length = 2000
Score = 31.9 bits (69), Expect = 2.9
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Frame = -2
Query: 702 PXP-AISXTSTRSSNPRFHTPTTPDLTS----ISINPLTPY*KEFAPGLKPPLSSE 550
P P A S S+R+S+P +PTTP+ ++ + P TP E G++ PL E
Sbjct: 1519 PDPSADSKRSSRASSPTKTSPTTPEASATNSPCTSKPATPAPSEKGEGIRTPLEKE 1574
>L07518-1|AAB61945.1| 505|Homo sapiens mucin protein.
Length = 505
Score = 31.9 bits (69), Expect = 2.9
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Frame = -2
Query: 717 YASSHPXPAISXTSTRSSNPRF-----HTPTTPDLTSISINPLTPY*KEFAPGLKPPLSS 553
+ASS P ++ TST + P+ TP T ++ S P TP +P PLSS
Sbjct: 247 HASSTHHPEVTPTSTTNVTPKSTSRDTSTPVTHTTSATSSRPPTPITTHSSPTRSSPLSS 306
Query: 552 EAP 544
P
Sbjct: 307 TGP 309
>BC110648-1|AAI10649.1| 661|Homo sapiens CHD3 protein protein.
Length = 661
Score = 31.9 bits (69), Expect = 2.9
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Frame = -2
Query: 702 PXP-AISXTSTRSSNPRFHTPTTPDLTS----ISINPLTPY*KEFAPGLKPPLSSE 550
P P A S S+R+S+P +PTTP+ ++ + P TP E G++ PL E
Sbjct: 180 PDPSADSKRSSRASSPTKTSPTTPEASATNSPCTSKPATPAPSEKGEGIRTPLEKE 235
>AF259792-1|AAG36928.1| 1486|Homo sapiens p250R protein.
Length = 1486
Score = 31.9 bits (69), Expect = 2.9
Identities = 25/91 (27%), Positives = 36/91 (39%), Gaps = 8/91 (8%)
Frame = -2
Query: 702 PXPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEF-----APG-LKPPLSSEAPS 541
P P + T P+ P+ + S+ P TP PG LKPP+ + P
Sbjct: 399 PPPEVFSTGDTKKQPKLQPPSPANSGSLQ-GPQTPQSTGSNSMAEVPGDLKPPIPASTPH 457
Query: 540 AYLTPSSLGMXKGVS--PPYFQVNDESQASR 454
+TP G +S P+ V+D S R
Sbjct: 458 GQMTPMQGGRSSTISVHDPFSDVSDSSFPKR 488
>AF006515-1|AAB87383.1| 1944|Homo sapiens CHD3 protein.
Length = 1944
Score = 31.9 bits (69), Expect = 2.9
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Frame = -2
Query: 702 PXP-AISXTSTRSSNPRFHTPTTPDLTS----ISINPLTPY*KEFAPGLKPPLSSE 550
P P A S S+R+S+P +PTTP+ ++ + P TP E G++ PL E
Sbjct: 1519 PDPSADSKRSSRASSPTKTSPTTPEASATNSPCTSKPATPAPSEKGEGIRTPLEKE 1574
>CR456522-1|CAG30408.1| 931|Homo sapiens MKL1 protein.
Length = 931
Score = 31.1 bits (67), Expect = 5.1
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = -2
Query: 663 NPRFHTPTTPDLTSISINPLTPY*KEFAPGLKP-PLSSEAPSAYLTPSSLGMXKGVSPP 490
NP P T + ++ P P L+P P AP L P G+ KGV+PP
Sbjct: 598 NPSLAAPATNHIDPCAVAPGPPSVVVKQEALQPEPEPVPAPQLLLGPQGPGLIKGVAPP 656
>BC115039-1|AAI15040.1| 798|Homo sapiens MKL1 protein protein.
Length = 798
Score = 31.1 bits (67), Expect = 5.1
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = -2
Query: 663 NPRFHTPTTPDLTSISINPLTPY*KEFAPGLKP-PLSSEAPSAYLTPSSLGMXKGVSPP 490
NP P T + ++ P P L+P P AP L P G+ KGV+PP
Sbjct: 598 NPSLAAPATNHIDPCAVAPGPPSVVVKQEALQPEPEPVPAPQLLLGPQGPGLIKGVAPP 656
>L40992-1|AAA89072.1| 440|Homo sapiens core-binding factor, runt
domain, alpha subunit 1 protein.
Length = 440
Score = 30.7 bits (66), Expect = 6.7
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 8/88 (9%)
Frame = -2
Query: 720 PYASSHPXPAISX-TSTRSSNPRFHTPT----TPDLT---SISINPLTPY*KEFAPGLKP 565
P++ P+IS T +R SNPR H P TP +T S+ ++ T Y + P P
Sbjct: 288 PFSDPRQFPSISSLTESRFSNPRMHYPATFTYTPPVTSGMSLGMSATTHY-HTYLPPPYP 346
Query: 564 PLSSEAPSAYLTPSSLGMXKGVSPPYFQ 481
S + T S+ + G S +Q
Sbjct: 347 GSSQSQSGPFQTSSTPYLYYGTSSGSYQ 374
>AL591545-3|CAI40666.1| 1736|Homo sapiens RP11-419L10.1 protein.
Length = 1736
Score = 30.7 bits (66), Expect = 6.7
Identities = 25/91 (27%), Positives = 35/91 (38%), Gaps = 8/91 (8%)
Frame = -2
Query: 702 PXPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEF-----APG-LKPPLSSEAPS 541
P P + T P+ P+ + S+ P TP PG LKPP + P
Sbjct: 649 PPPEVFSTGDTKKQPKLQPPSPANSGSLQ-GPQTPQSTGSNSMAEVPGDLKPPTPASTPH 707
Query: 540 AYLTPSSLGMXKGVS--PPYFQVNDESQASR 454
+TP G +S P+ V+D S R
Sbjct: 708 GQMTPMQGGRSSTISVHDPFSDVSDSSFPKR 738
>AL591545-2|CAI40664.1| 1485|Homo sapiens RP11-419L10.1 protein.
Length = 1485
Score = 30.7 bits (66), Expect = 6.7
Identities = 25/91 (27%), Positives = 35/91 (38%), Gaps = 8/91 (8%)
Frame = -2
Query: 702 PXPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEF-----APG-LKPPLSSEAPS 541
P P + T P+ P+ + S+ P TP PG LKPP + P
Sbjct: 398 PPPEVFSTGDTKKQPKLQPPSPANSGSLQ-GPQTPQSTGSNSMAEVPGDLKPPTPASTPH 456
Query: 540 AYLTPSSLGMXKGVS--PPYFQVNDESQASR 454
+TP G +S P+ V+D S R
Sbjct: 457 GQMTPMQGGRSSTISVHDPFSDVSDSSFPKR 487
>AL358135-4|CAI13532.1| 589|Homo sapiens runt-related transcription
factor 2 protein.
Length = 589
Score = 30.7 bits (66), Expect = 6.7
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 8/88 (9%)
Frame = -2
Query: 720 PYASSHPXPAISX-TSTRSSNPRFHTPT----TPDLT---SISINPLTPY*KEFAPGLKP 565
P++ P+IS T +R SNPR H P TP +T S+ ++ T Y + P P
Sbjct: 437 PFSDPRQFPSISSLTESRFSNPRMHYPATFTYTPPVTSGMSLGMSATTHY-HTYLPPPYP 495
Query: 564 PLSSEAPSAYLTPSSLGMXKGVSPPYFQ 481
S + T S+ + G S +Q
Sbjct: 496 GSSQSQSGPFQTSSTPYLYYGTSSGSYQ 523
>AL358135-3|CAI13531.1| 521|Homo sapiens runt-related transcription
factor 2 protein.
Length = 521
Score = 30.7 bits (66), Expect = 6.7
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 8/88 (9%)
Frame = -2
Query: 720 PYASSHPXPAISX-TSTRSSNPRFHTPT----TPDLT---SISINPLTPY*KEFAPGLKP 565
P++ P+IS T +R SNPR H P TP +T S+ ++ T Y + P P
Sbjct: 369 PFSDPRQFPSISSLTESRFSNPRMHYPATFTYTPPVTSGMSLGMSATTHY-HTYLPPPYP 427
Query: 564 PLSSEAPSAYLTPSSLGMXKGVSPPYFQ 481
S + T S+ + G S +Q
Sbjct: 428 GSSQSQSGPFQTSSTPYLYYGTSSGSYQ 455
>AL358135-2|CAI13528.1| 507|Homo sapiens runt-related transcription
factor 2 protein.
Length = 507
Score = 30.7 bits (66), Expect = 6.7
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 8/88 (9%)
Frame = -2
Query: 720 PYASSHPXPAISX-TSTRSSNPRFHTPT----TPDLT---SISINPLTPY*KEFAPGLKP 565
P++ P+IS T +R SNPR H P TP +T S+ ++ T Y + P P
Sbjct: 355 PFSDPRQFPSISSLTESRFSNPRMHYPATFTYTPPVTSGMSLGMSATTHY-HTYLPPPYP 413
Query: 564 PLSSEAPSAYLTPSSLGMXKGVSPPYFQ 481
S + T S+ + G S +Q
Sbjct: 414 GSSQSQSGPFQTSSTPYLYYGTSSGSYQ 441
>AL358135-1|CAI13529.1| 440|Homo sapiens runt-related transcription
factor 2 protein.
Length = 440
Score = 30.7 bits (66), Expect = 6.7
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 8/88 (9%)
Frame = -2
Query: 720 PYASSHPXPAISX-TSTRSSNPRFHTPT----TPDLT---SISINPLTPY*KEFAPGLKP 565
P++ P+IS T +R SNPR H P TP +T S+ ++ T Y + P P
Sbjct: 288 PFSDPRQFPSISSLTESRFSNPRMHYPATFTYTPPVTSGMSLGMSATTHY-HTYLPPPYP 346
Query: 564 PLSSEAPSAYLTPSSLGMXKGVSPPYFQ 481
S + T S+ + G S +Q
Sbjct: 347 GSSQSQSGPFQTSSTPYLYYGTSSGSYQ 374
>AL355297-2|CAH71534.1| 1736|Homo sapiens RP11-419L10.1 protein.
Length = 1736
Score = 30.7 bits (66), Expect = 6.7
Identities = 25/91 (27%), Positives = 35/91 (38%), Gaps = 8/91 (8%)
Frame = -2
Query: 702 PXPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEF-----APG-LKPPLSSEAPS 541
P P + T P+ P+ + S+ P TP PG LKPP + P
Sbjct: 649 PPPEVFSTGDTKKQPKLQPPSPANSGSLQ-GPQTPQSTGSNSMAEVPGDLKPPTPASTPH 707
Query: 540 AYLTPSSLGMXKGVS--PPYFQVNDESQASR 454
+TP G +S P+ V+D S R
Sbjct: 708 GQMTPMQGGRSSTISVHDPFSDVSDSSFPKR 738
>AL162578-3|CAI40014.1| 1736|Homo sapiens RP11-419L10.1 protein.
Length = 1736
Score = 30.7 bits (66), Expect = 6.7
Identities = 25/91 (27%), Positives = 35/91 (38%), Gaps = 8/91 (8%)
Frame = -2
Query: 702 PXPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEF-----APG-LKPPLSSEAPS 541
P P + T P+ P+ + S+ P TP PG LKPP + P
Sbjct: 649 PPPEVFSTGDTKKQPKLQPPSPANSGSLQ-GPQTPQSTGSNSMAEVPGDLKPPTPASTPH 707
Query: 540 AYLTPSSLGMXKGVS--PPYFQVNDESQASR 454
+TP G +S P+ V+D S R
Sbjct: 708 GQMTPMQGGRSSTISVHDPFSDVSDSSFPKR 738
>AL161907-4|CAI19641.1| 589|Homo sapiens runt-related transcription
factor 2 protein.
Length = 589
Score = 30.7 bits (66), Expect = 6.7
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 8/88 (9%)
Frame = -2
Query: 720 PYASSHPXPAISX-TSTRSSNPRFHTPT----TPDLT---SISINPLTPY*KEFAPGLKP 565
P++ P+IS T +R SNPR H P TP +T S+ ++ T Y + P P
Sbjct: 437 PFSDPRQFPSISSLTESRFSNPRMHYPATFTYTPPVTSGMSLGMSATTHY-HTYLPPPYP 495
Query: 564 PLSSEAPSAYLTPSSLGMXKGVSPPYFQ 481
S + T S+ + G S +Q
Sbjct: 496 GSSQSQSGPFQTSSTPYLYYGTSSGSYQ 523
>AL161907-3|CAI19639.1| 521|Homo sapiens runt-related transcription
factor 2 protein.
Length = 521
Score = 30.7 bits (66), Expect = 6.7
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 8/88 (9%)
Frame = -2
Query: 720 PYASSHPXPAISX-TSTRSSNPRFHTPT----TPDLT---SISINPLTPY*KEFAPGLKP 565
P++ P+IS T +R SNPR H P TP +T S+ ++ T Y + P P
Sbjct: 369 PFSDPRQFPSISSLTESRFSNPRMHYPATFTYTPPVTSGMSLGMSATTHY-HTYLPPPYP 427
Query: 564 PLSSEAPSAYLTPSSLGMXKGVSPPYFQ 481
S + T S+ + G S +Q
Sbjct: 428 GSSQSQSGPFQTSSTPYLYYGTSSGSYQ 455
>AL161907-2|CAI19638.1| 507|Homo sapiens runt-related transcription
factor 2 protein.
Length = 507
Score = 30.7 bits (66), Expect = 6.7
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 8/88 (9%)
Frame = -2
Query: 720 PYASSHPXPAISX-TSTRSSNPRFHTPT----TPDLT---SISINPLTPY*KEFAPGLKP 565
P++ P+IS T +R SNPR H P TP +T S+ ++ T Y + P P
Sbjct: 355 PFSDPRQFPSISSLTESRFSNPRMHYPATFTYTPPVTSGMSLGMSATTHY-HTYLPPPYP 413
Query: 564 PLSSEAPSAYLTPSSLGMXKGVSPPYFQ 481
S + T S+ + G S +Q
Sbjct: 414 GSSQSQSGPFQTSSTPYLYYGTSSGSYQ 441
>AL161907-1|CAI19637.1| 440|Homo sapiens runt-related transcription
factor 2 protein.
Length = 440
Score = 30.7 bits (66), Expect = 6.7
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 8/88 (9%)
Frame = -2
Query: 720 PYASSHPXPAISX-TSTRSSNPRFHTPT----TPDLT---SISINPLTPY*KEFAPGLKP 565
P++ P+IS T +R SNPR H P TP +T S+ ++ T Y + P P
Sbjct: 288 PFSDPRQFPSISSLTESRFSNPRMHYPATFTYTPPVTSGMSLGMSATTHY-HTYLPPPYP 346
Query: 564 PLSSEAPSAYLTPSSLGMXKGVSPPYFQ 481
S + T S+ + G S +Q
Sbjct: 347 GSSQSQSGPFQTSSTPYLYYGTSSGSYQ 374
>AL096865-5|CAI19932.1| 589|Homo sapiens runt-related transcription
factor 2 protein.
Length = 589
Score = 30.7 bits (66), Expect = 6.7
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 8/88 (9%)
Frame = -2
Query: 720 PYASSHPXPAISX-TSTRSSNPRFHTPT----TPDLT---SISINPLTPY*KEFAPGLKP 565
P++ P+IS T +R SNPR H P TP +T S+ ++ T Y + P P
Sbjct: 437 PFSDPRQFPSISSLTESRFSNPRMHYPATFTYTPPVTSGMSLGMSATTHY-HTYLPPPYP 495
Query: 564 PLSSEAPSAYLTPSSLGMXKGVSPPYFQ 481
S + T S+ + G S +Q
Sbjct: 496 GSSQSQSGPFQTSSTPYLYYGTSSGSYQ 523
>AL096865-4|CAI19931.1| 521|Homo sapiens runt-related transcription
factor 2 protein.
Length = 521
Score = 30.7 bits (66), Expect = 6.7
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 8/88 (9%)
Frame = -2
Query: 720 PYASSHPXPAISX-TSTRSSNPRFHTPT----TPDLT---SISINPLTPY*KEFAPGLKP 565
P++ P+IS T +R SNPR H P TP +T S+ ++ T Y + P P
Sbjct: 369 PFSDPRQFPSISSLTESRFSNPRMHYPATFTYTPPVTSGMSLGMSATTHY-HTYLPPPYP 427
Query: 564 PLSSEAPSAYLTPSSLGMXKGVSPPYFQ 481
S + T S+ + G S +Q
Sbjct: 428 GSSQSQSGPFQTSSTPYLYYGTSSGSYQ 455
>AL096865-2|CAI19925.1| 507|Homo sapiens runt-related transcription
factor 2 protein.
Length = 507
Score = 30.7 bits (66), Expect = 6.7
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 8/88 (9%)
Frame = -2
Query: 720 PYASSHPXPAISX-TSTRSSNPRFHTPT----TPDLT---SISINPLTPY*KEFAPGLKP 565
P++ P+IS T +R SNPR H P TP +T S+ ++ T Y + P P
Sbjct: 355 PFSDPRQFPSISSLTESRFSNPRMHYPATFTYTPPVTSGMSLGMSATTHY-HTYLPPPYP 413
Query: 564 PLSSEAPSAYLTPSSLGMXKGVSPPYFQ 481
S + T S+ + G S +Q
Sbjct: 414 GSSQSQSGPFQTSSTPYLYYGTSSGSYQ 441
>AL096865-1|CAI19926.1| 440|Homo sapiens runt-related transcription
factor 2 protein.
Length = 440
Score = 30.7 bits (66), Expect = 6.7
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 8/88 (9%)
Frame = -2
Query: 720 PYASSHPXPAISX-TSTRSSNPRFHTPT----TPDLT---SISINPLTPY*KEFAPGLKP 565
P++ P+IS T +R SNPR H P TP +T S+ ++ T Y + P P
Sbjct: 288 PFSDPRQFPSISSLTESRFSNPRMHYPATFTYTPPVTSGMSLGMSATTHY-HTYLPPPYP 346
Query: 564 PLSSEAPSAYLTPSSLGMXKGVSPPYFQ 481
S + T S+ + G S +Q
Sbjct: 347 GSSQSQSGPFQTSSTPYLYYGTSSGSYQ 374
>AL049820-4|CAI42308.1| 1736|Homo sapiens RP11-419L10.1 protein.
Length = 1736
Score = 30.7 bits (66), Expect = 6.7
Identities = 25/91 (27%), Positives = 35/91 (38%), Gaps = 8/91 (8%)
Frame = -2
Query: 702 PXPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEF-----APG-LKPPLSSEAPS 541
P P + T P+ P+ + S+ P TP PG LKPP + P
Sbjct: 649 PPPEVFSTGDTKKQPKLQPPSPANSGSLQ-GPQTPQSTGSNSMAEVPGDLKPPTPASTPH 707
Query: 540 AYLTPSSLGMXKGVS--PPYFQVNDESQASR 454
+TP G +S P+ V+D S R
Sbjct: 708 GQMTPMQGGRSSTISVHDPFSDVSDSSFPKR 738
>AL049820-2|CAI42305.1| 1485|Homo sapiens RP11-419L10.1 protein.
Length = 1485
Score = 30.7 bits (66), Expect = 6.7
Identities = 25/91 (27%), Positives = 35/91 (38%), Gaps = 8/91 (8%)
Frame = -2
Query: 702 PXPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEF-----APG-LKPPLSSEAPS 541
P P + T P+ P+ + S+ P TP PG LKPP + P
Sbjct: 398 PPPEVFSTGDTKKQPKLQPPSPANSGSLQ-GPQTPQSTGSNSMAEVPGDLKPPTPASTPH 456
Query: 540 AYLTPSSLGMXKGVS--PPYFQVNDESQASR 454
+TP G +S P+ V+D S R
Sbjct: 457 GQMTPMQGGRSSTISVHDPFSDVSDSSFPKR 487
>AF521671-1|AAN03447.1| 2165|Homo sapiens SWI/SNF chromatin remodeling
complex subunit OSA2 protein.
Length = 2165
Score = 30.7 bits (66), Expect = 6.7
Identities = 25/91 (27%), Positives = 35/91 (38%), Gaps = 8/91 (8%)
Frame = -2
Query: 702 PXPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEF-----APG-LKPPLSSEAPS 541
P P + T P+ P+ + S+ P TP PG LKPP + P
Sbjct: 1078 PPPEVFSTGDTKKQPKLQPPSPANSGSLQ-GPQTPQSTGSNSMAEVPGDLKPPTPASTPH 1136
Query: 540 AYLTPSSLGMXKGVS--PPYFQVNDESQASR 454
+TP G +S P+ V+D S R
Sbjct: 1137 GQMTPMQGGRSSTISVHDPFSDVSDSSFPKR 1167
>AF468300-1|AAL76077.1| 1740|Homo sapiens BRG1-binding protein
ELD/OSA1 protein.
Length = 1740
Score = 30.7 bits (66), Expect = 6.7
Identities = 25/91 (27%), Positives = 35/91 (38%), Gaps = 8/91 (8%)
Frame = -2
Query: 702 PXPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEF-----APG-LKPPLSSEAPS 541
P P + T P+ P+ + S+ P TP PG LKPP + P
Sbjct: 653 PPPEVFSTGDTKKQPKLQPPSPANSGSLQ-GPQTPQSTGSNSMAEVPGDLKPPTPASTPH 711
Query: 540 AYLTPSSLGMXKGVS--PPYFQVNDESQASR 454
+TP G +S P+ V+D S R
Sbjct: 712 GQMTPMQGGRSSTISVHDPFSDVSDSSFPKR 742
>AF253515-1|AAN70985.1| 1957|Homo sapiens BAF250b subunit protein.
Length = 1957
Score = 30.7 bits (66), Expect = 6.7
Identities = 25/91 (27%), Positives = 35/91 (38%), Gaps = 8/91 (8%)
Frame = -2
Query: 702 PXPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEF-----APG-LKPPLSSEAPS 541
P P + T P+ P+ + S+ P TP PG LKPP + P
Sbjct: 870 PPPEVFSTGDTKKQPKLQPPSPANSGSLQ-GPQTPQSTGSNSMAEVPGDLKPPTPASTPH 928
Query: 540 AYLTPSSLGMXKGVS--PPYFQVNDESQASR 454
+TP G +S P+ V+D S R
Sbjct: 929 GQMTPMQGGRSSTISVHDPFSDVSDSSFPKR 959
>AF001450-2|AAB65158.1| 507|Homo sapiens core binding factor alpha1
subunit protein.
Length = 507
Score = 30.7 bits (66), Expect = 6.7
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 8/88 (9%)
Frame = -2
Query: 720 PYASSHPXPAISX-TSTRSSNPRFHTPT----TPDLT---SISINPLTPY*KEFAPGLKP 565
P++ P+IS T +R SNPR H P TP +T S+ ++ T Y + P P
Sbjct: 355 PFSDPRQFPSISSLTESRFSNPRMHYPATFTYTPPVTSGMSLGMSATTHY-HTYLPPPYP 413
Query: 564 PLSSEAPSAYLTPSSLGMXKGVSPPYFQ 481
S + T S+ + G S +Q
Sbjct: 414 GSSQSQSGPFQTSSTPYLYYGTSSGSYQ 441
>AF001450-1|AAB65159.2| 521|Homo sapiens core binding factor alpha1
subunit protein.
Length = 521
Score = 30.7 bits (66), Expect = 6.7
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 8/88 (9%)
Frame = -2
Query: 720 PYASSHPXPAISX-TSTRSSNPRFHTPT----TPDLT---SISINPLTPY*KEFAPGLKP 565
P++ P+IS T +R SNPR H P TP +T S+ ++ T Y + P P
Sbjct: 369 PFSDPRQFPSISSLTESRFSNPRMHYPATFTYTPPVTSGMSLGMSATTHY-HTYLPPPYP 427
Query: 564 PLSSEAPSAYLTPSSLGMXKGVSPPYFQ 481
S + T S+ + G S +Q
Sbjct: 428 GSSQSQSGPFQTSSTPYLYYGTSSGSYQ 455
>AB033061-1|BAA86549.1| 1485|Homo sapiens KIAA1235 protein protein.
Length = 1485
Score = 30.7 bits (66), Expect = 6.7
Identities = 25/91 (27%), Positives = 35/91 (38%), Gaps = 8/91 (8%)
Frame = -2
Query: 702 PXPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEF-----APG-LKPPLSSEAPS 541
P P + T P+ P+ + S+ P TP PG LKPP + P
Sbjct: 398 PPPEVFSTGDTKKQPKLQPPSPANSGSLQ-GPQTPQSTGSNSMAEVPGDLKPPTPASTPH 456
Query: 540 AYLTPSSLGMXKGVS--PPYFQVNDESQASR 454
+TP G +S P+ V+D S R
Sbjct: 457 GQMTPMQGGRSSTISVHDPFSDVSDSSFPKR 487
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,701,169
Number of Sequences: 237096
Number of extensions: 2364789
Number of successful extensions: 6699
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 6078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6695
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10315140830
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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