Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP05_T7_K06
         (807 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_05_0050 + 18665251-18665613,18667280-18667744,18668548-186690...    31   1.1  
03_04_0115 + 17393995-17394693,17394708-17395001                       31   1.1  
01_07_0031 - 40603243-40603491,40603617-40603799,40603896-406040...    29   3.3  

>11_05_0050 +
           18665251-18665613,18667280-18667744,18668548-18669037,
           18669115-18669143
          Length = 448

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 17/49 (34%), Positives = 22/49 (44%)
 Frame = -3

Query: 436 ADYFPNPDHAGASHRRRPRHVLTDPSDPITFALDAFSSNTGSRLSDPGN 290
           AD  PNP  A  SH +   HV + P  P+ F   + +   GS    P N
Sbjct: 132 ADICPNPQPAYMSHPKPNPHVFSSPCSPVVFNSPS-NHLAGSTTPTPNN 179


>03_04_0115 + 17393995-17394693,17394708-17395001
          Length = 330

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +3

Query: 66  RTGGRAKAQPGSVGFANSFPSASEGDLTAQEQL 164
           + GGR    PGS+G    F +AS+ DL A++ +
Sbjct: 173 KEGGRKLRWPGSLGAWEGFSNASDADLVAEQHI 205


>01_07_0031 -
           40603243-40603491,40603617-40603799,40603896-40604084,
           40604244-40604916,40605583-40605737
          Length = 482

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
 Frame = +2

Query: 362 WIRKDVSRPS-----PVTGSCVIRIREVVSGGNDKAIIMTHSLIEVPFRR*LHVFLDRFE 526
           W+ K V RP+     P T  CV  I+EV++ G    + +  S+    +   +  ++D  E
Sbjct: 239 WLHKVVDRPNVYIKIPATAECVPSIKEVIANGISVNVTLIFSIAR--YEAVIDAYIDGLE 296

Query: 527 A 529
           A
Sbjct: 297 A 297


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,570,273
Number of Sequences: 37544
Number of extensions: 441727
Number of successful extensions: 1039
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1039
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2197677108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)