Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP05_T7_H07
         (775 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0405 - 17767303-17767665,17767815-17768039,17768115-177683...   221   7e-58
02_04_0096 + 19669428-19669525,19670770-19670818,19671041-196711...    34   0.14 
02_01_0487 + 3503003-3503037,3505802-3505833,3506012-3506127,350...    30   1.8  
11_04_0354 + 16697571-16700256,16700335-16700759                       28   9.5  
05_03_0526 + 15021174-15021363,15021743-15021843,15021893-15022033     28   9.5  

>07_03_0405 -
           17767303-17767665,17767815-17768039,17768115-17768342,
           17768607-17768621,17768622-17768810,17769106-17769213,
           17769917-17770045
          Length = 418

 Score =  221 bits (539), Expect = 7e-58
 Identities = 107/170 (62%), Positives = 124/170 (72%)
 Frame = -2

Query: 651 NXGHPVFATRYGKIAVNXXFGRHHVLNWMMFGQNGAEIVFNPSATIAGEGGSEYMWNVEA 472
           N GHPVF T YGKI VN  +GRHH LNW+ FG NGAEIVFNPSAT+ GE  SE MW +EA
Sbjct: 242 NTGHPVFETAYGKIGVNICYGRHHPLNWLAFGLNGAEIVFNPSATV-GEL-SEPMWPIEA 299

Query: 471 RNAAITNXYFTAAINRVGYEEFPNEFTSADGKPAHKDLGLFYGSSYFCGPDGVRCPGLSR 292
           RNAAI N YF  +INRVG E FPN FTS DGKP H D G FYGSS+F  PD    P LSR
Sbjct: 300 RNAAIANSYFVGSINRVGTEVFPNPFTSGDGKPQHADFGHFYGSSHFSAPDASCTPSLSR 359

Query: 291 TRDGLLIAAVDLNLNRQIRDRRCYYMTQRLDMYVNSLSKVLELDYKPQVV 142
            RDGL+I+ +DLNL RQI+D+  + MT R D Y + LS+ L+ D+KPQV+
Sbjct: 360 YRDGLMISDMDLNLCRQIKDKWGFRMTARYDTYASLLSEYLKPDFKPQVI 409


>02_04_0096 +
           19669428-19669525,19670770-19670818,19671041-19671132,
           19671235-19671386,19671478-19671524,19671617-19671650,
           19671769-19671935,19672070-19672166,19672239-19672408
          Length = 301

 Score = 33.9 bits (74), Expect = 0.14
 Identities = 40/157 (25%), Positives = 61/157 (38%), Gaps = 6/157 (3%)
 Frame = -2

Query: 645 GHPVFATRYGKIAVNXXFGRHHVLNWMMFGQNGAEIVFNPSATIAGEG-----GSEYMWN 481
           G   F T+Y  I V   + +            GAEI+F P+A I  E       S   W 
Sbjct: 144 GFKAFKTKYATIGVGICWDQWFPECARAMVLQGAEILFYPTA-IGSEPQDNNLDSREHWK 202

Query: 480 VEARNAAITNXYFTAAINRVGYEEFPNEFTSADGKPAHKDLGL-FYGSSYFCGPDGVRCP 304
              +  A  N     A NR+G E    E         H +  + F+G+S+  GP G    
Sbjct: 203 RVMQGHAGANLVPLVASNRIGRETVETE---------HGESTITFFGNSFIAGPTGEIVK 253

Query: 303 GLSRTRDGLLIAAVDLNLNRQIRDRRCYYMTQRLDMY 193
             +   + +L+A  DL+  +  R     +  +R D+Y
Sbjct: 254 LANDKDEDVLVAEFDLDEIKSTRHGWGIFRDRRPDLY 290


>02_01_0487 +
           3503003-3503037,3505802-3505833,3506012-3506127,
           3506227-3506437,3506555-3506792,3507075-3507252,
           3507962-3508079,3508167-3508373,3509134-3509234
          Length = 411

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 21/64 (32%), Positives = 32/64 (50%)
 Frame = -2

Query: 534 FNPSATIAGEGGSEYMWNVEARNAAITNXYFTAAINRVGYEEFPNEFTSADGKPAHKDLG 355
           F+PS  I GEGG   ++  + RN  +      +  +R G +EF NE   A    +H++L 
Sbjct: 45  FSPSNKI-GEGGFGSVYKGKLRNGKLVAVKVLSLESRQGAKEFLNEL-MAISNVSHENLV 102

Query: 354 LFYG 343
             YG
Sbjct: 103 KLYG 106


>11_04_0354 + 16697571-16700256,16700335-16700759
          Length = 1036

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = +1

Query: 208 LGHVITTSVSDLSVQVQVHGRD*QAVSGAGQTGAPNAVG 324
           LG V+ TSVS+LS Q+Q+       +SG    G  N VG
Sbjct: 331 LGGVLPTSVSNLSAQLQLLYVGFNKISGNIPFGISNLVG 369


>05_03_0526 + 15021174-15021363,15021743-15021843,15021893-15022033
          Length = 143

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = -1

Query: 268 GRGLEPEQTDQRQTLLLHDPTPGHVREQSQQSTRAGLQ 155
           G+G EP+  D ++ L ++D  PG   E  Q S+ AGL+
Sbjct: 89  GKGHEPDWRDLQELLRIYD--PGTSTECKQASSGAGLR 124


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,193,196
Number of Sequences: 37544
Number of extensions: 339124
Number of successful extensions: 1012
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1011
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2068401984
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)