Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP05_T7_H04
(812 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 95 1e-19
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 88 2e-17
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 88 2e-17
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 83 3e-16
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 83 3e-16
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 79 5e-15
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 75 1e-13
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 75 1e-13
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 70 4e-12
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 57 3e-08
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 57 3e-08
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 57 3e-08
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 56 4e-08
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 54 3e-07
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 52 1e-06
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 52 1e-06
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 52 1e-06
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 52 1e-06
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 52 1e-06
U14102-1|AAC46495.1| 299|Drosophila melanogaster putative rever... 50 4e-06
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 50 4e-06
AY119084-1|AAM50944.1| 543|Drosophila melanogaster LP10938p pro... 31 1.9
AY058505-1|AAL13734.1| 422|Drosophila melanogaster LD21309p pro... 31 1.9
AF325529-1|AAK01218.1| 422|Drosophila melanogaster elongation i... 31 1.9
AE014297-297|AAN13249.1| 422|Drosophila melanogaster CG2922-PG,... 31 1.9
AE014297-296|AAN13248.1| 422|Drosophila melanogaster CG2922-PF,... 31 1.9
AE014297-295|AAN13247.1| 422|Drosophila melanogaster CG2922-PE,... 31 1.9
AE014297-294|AAN13246.1| 422|Drosophila melanogaster CG2922-PD,... 31 1.9
AE014297-293|AAF51995.1| 422|Drosophila melanogaster CG2922-PC,... 31 1.9
AE014297-292|AAG22214.1| 422|Drosophila melanogaster CG2922-PB,... 31 1.9
AE014297-291|AAF51996.1| 422|Drosophila melanogaster CG2922-PA,... 31 1.9
AE013599-3359|AAF46819.1| 543|Drosophila melanogaster CG3292-PA... 31 1.9
AY118395-1|AAM48424.1| 268|Drosophila melanogaster RE53819p pro... 29 7.6
AE014296-1702|AAF50232.1| 268|Drosophila melanogaster CG18179-P... 29 7.6
AE014134-843|AAF52203.1| 1940|Drosophila melanogaster CG16858-PA... 29 10.0
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 95.1 bits (226), Expect = 1e-19
Identities = 55/158 (34%), Positives = 79/158 (50%), Gaps = 1/158 (0%)
Frame = -1
Query: 776 LGVTLDSRXTFRPHIXXXXXXXXXXXRL-YPMICRRSKMSLRNKVTLYKTCIRPVMTYAS 600
LGV LD R TF H+ Y ++ RSK+SL NK+T+YK + P Y
Sbjct: 748 LGVLLDRRLTFSKHVTDIRTRLRAKVAKHYWLLSSRSKLSLSNKLTIYKQILAPNWKYGC 807
Query: 599 VVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFDK 420
++ A H+K Q IQ++ R+ G WFVRN LH DL L ++ + S R+ D+
Sbjct: 808 QIWGLACDSHIKRIQAIQNKVARLITGCEWFVRNTTLHRDLKLATVFDEINKHSSRYHDR 867
Query: 419 AARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPP 306
RH N L A P R+ +RR+P+ +I+ P
Sbjct: 868 LERHRNRLASALNR--SRPPRRL--NRRQPRDLITRSP 901
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 87.8 bits (208), Expect = 2e-17
Identities = 46/128 (35%), Positives = 72/128 (56%), Gaps = 1/128 (0%)
Frame = -1
Query: 776 LGVTLDSRXTFRPHIXXXXXXXXXXXR-LYPMICRRSKMSLRNKVTLYKTCIRPVMTYAS 600
LGV LD R T+R HI R L+ +I RS +SL K LY + ++P+ TY S
Sbjct: 739 LGVHLDRRLTWRKHIEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSVLKPIWTYGS 798
Query: 599 VVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFDK 420
++ +A+R ++ Q QSR RI GAPW++RN ++H DL ++ + + + ++ +K
Sbjct: 799 ELWGNASRSNIDIIQRAQSRILRIITGAPWYLRNENIHRDLKIKLVIEVIAEKKTKYNEK 858
Query: 419 AARHENPL 396
H NPL
Sbjct: 859 LTTHTNPL 866
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 87.8 bits (208), Expect = 2e-17
Identities = 46/128 (35%), Positives = 72/128 (56%), Gaps = 1/128 (0%)
Frame = -1
Query: 776 LGVTLDSRXTFRPHIXXXXXXXXXXXR-LYPMICRRSKMSLRNKVTLYKTCIRPVMTYAS 600
LGV LD R T+R HI R L+ +I RS +SL K LY + ++P+ TY S
Sbjct: 739 LGVHLDRRLTWRKHIEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSVLKPIWTYGS 798
Query: 599 VVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFDK 420
++ +A+R ++ Q QSR RI GAPW++RN ++H DL ++ + + + ++ +K
Sbjct: 799 ELWGNASRSNIDIIQRAQSRILRIITGAPWYLRNENIHRDLKIKLVIEVIAEKKTKYNEK 858
Query: 419 AARHENPL 396
H NPL
Sbjct: 859 LTTHTNPL 866
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 83.4 bits (197), Expect = 3e-16
Identities = 50/160 (31%), Positives = 78/160 (48%), Gaps = 2/160 (1%)
Frame = -1
Query: 776 LGVTLDSRXTFRPHIXXXXXXXXXXXRLYP-MICRRSKMSLRNKVTLYKTCIRPVMTYAS 600
LG+TLD + TF HI +I R+K+SL KV +YK+ + P + Y
Sbjct: 753 LGITLDRKLTFSRHITNIQQAFRTKVARMSWLIAPRNKLSLGCKVNIYKSILAPCLFYGL 812
Query: 599 VVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFDK 420
V+ AA+ HL +I+Q++ R GAPW++R D+ DL + + LQ+ + ++ ++
Sbjct: 813 QVYGIAAKSHLNKIRILQAKTLRRISGAPWYMRTRDIERDLKVPKLGDKLQNIAQKYMER 872
Query: 419 AARHENPLIVAAGNYIPDPAD-RMESSRRRPKHVISDPPD 303
H N L G AD R RR +H D P+
Sbjct: 873 LNVHPNSLARKLGTAAVVNADPRTRVKRRLKRHHPHDLPN 912
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p protein.
Length = 718
Score = 83.4 bits (197), Expect = 3e-16
Identities = 50/160 (31%), Positives = 78/160 (48%), Gaps = 2/160 (1%)
Frame = -1
Query: 776 LGVTLDSRXTFRPHIXXXXXXXXXXXRLYP-MICRRSKMSLRNKVTLYKTCIRPVMTYAS 600
LG+TLD + TF HI +I R+K+SL KV +YK+ + P + Y
Sbjct: 555 LGITLDRKLTFSRHITNIQQAFRTKVARMSWLIAPRNKLSLGCKVNIYKSILAPCLFYGL 614
Query: 599 VVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFDK 420
V+ AA+ HL +I+Q++ R GAPW++R D+ DL + + LQ+ + ++ ++
Sbjct: 615 QVYGIAAKSHLNKIRILQAKTLRRISGAPWYMRTRDIERDLKVPKLGDKLQNIAQKYLER 674
Query: 419 AARHENPLIVAAGNYIPDPAD-RMESSRRRPKHVISDPPD 303
H N L G AD R RR +H D P+
Sbjct: 675 LNVHPNSLARKLGTAAVVNADPRTRVKRRLKRHHPHDLPN 714
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 79.4 bits (187), Expect = 5e-15
Identities = 40/128 (31%), Positives = 68/128 (53%), Gaps = 1/128 (0%)
Frame = -1
Query: 776 LGVTLDSRXTFRPHIXXXXXXXXXXXR-LYPMICRRSKMSLRNKVTLYKTCIRPVMTYAS 600
LG+TLD R TF PH+ + L ++ R+S M+LR K +Y C+ P+ Y
Sbjct: 754 LGITLDKRLTFGPHLKATTRRCYQRMQQLRWLLNRKSTMTLRAKRAVYVHCVAPIWLYGI 813
Query: 599 VVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFDK 420
++ AA+ + Q++Q+R R P++VR LH DL+L ++ + + + R+ D+
Sbjct: 814 QIWGIAAKSNYNRIQVLQNRAMRAITDCPYYVRGTTLHRDLNLHTVEEQISRHTSRYSDR 873
Query: 419 AARHENPL 396
RH + L
Sbjct: 874 LRRHHSIL 881
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 74.9 bits (176), Expect = 1e-13
Identities = 33/111 (29%), Positives = 60/111 (54%), Gaps = 1/111 (0%)
Frame = -1
Query: 776 LGVTLDSRXTFRPHIXXXXXXXXXXXR-LYPMICRRSKMSLRNKVTLYKTCIRPVMTYAS 600
LG+ D + TF+ HI LYP+I R+SK+S+ NK+ ++KT P++ Y S
Sbjct: 773 LGIIFDKKLTFKYHINNTIMKVNKIICTLYPLINRKSKLSISNKIIIFKTIFNPILMYGS 832
Query: 599 VVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQ 447
V+ A+ H+K QI Q++ ++ + P++ LH ++ + + +Q
Sbjct: 833 PVWGRCAQTHIKKLQICQNKLLKLIMNLPYYTNTKYLHIKAGVQKVQQKIQ 883
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 74.9 bits (176), Expect = 1e-13
Identities = 33/111 (29%), Positives = 60/111 (54%), Gaps = 1/111 (0%)
Frame = -1
Query: 776 LGVTLDSRXTFRPHIXXXXXXXXXXXR-LYPMICRRSKMSLRNKVTLYKTCIRPVMTYAS 600
LG+ D + TF+ HI LYP+I R+SK+S+ NK+ ++KT P++ Y S
Sbjct: 721 LGIIFDKKLTFKYHINNTIMKVNKIICTLYPLINRKSKLSISNKIIIFKTIFNPILMYGS 780
Query: 599 VVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQ 447
V+ A+ H+K QI Q++ ++ + P++ LH ++ + + +Q
Sbjct: 781 PVWGRCAQTHIKKLQICQNKLLKLIMNLPYYTNTKYLHIKAGVQKVQQKIQ 831
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 69.7 bits (163), Expect = 4e-12
Identities = 37/107 (34%), Positives = 61/107 (57%), Gaps = 1/107 (0%)
Frame = -1
Query: 776 LGVTLDSRXTFRPHIXXXXXXXXXXXR-LYPMICRRSKMSLRNKVTLYKTCIRPVMTYAS 600
LGV LD R T+R HI L+ +I S +SL +KV LY + ++P+ TY S
Sbjct: 741 LGVHLDRRLTWRRHIEAKKTQLKLKANNLHWLINSGSPLSLDHKVLLYNSILKPIWTYGS 800
Query: 599 VVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESIS 459
++ +A+ ++ Q QS+ R GAPW+VR+ ++ DL++ S++
Sbjct: 801 QLWGNASNSNIDIIQRAQSKILRTITGAPWYVRSENIQRDLNIPSVT 847
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 56.8 bits (131), Expect = 3e-08
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 4/152 (2%)
Frame = -1
Query: 776 LGVTLDSRXTFRPHIXXXXXXXXXXXR-LYPMICRRSKMSLRNKVTLYKTCIRPVMTYAS 600
LG+ LD R TF H+ + L +I + S + K+ L+K + P+ YA
Sbjct: 811 LGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAI 870
Query: 599 VVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFD 423
++ + K Q +++++ R + A + R D+ +++S + AS R+ +
Sbjct: 871 AIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFDEIFDKASQRYAN 930
Query: 422 KAARHENPLI--VAAGNYIPDPADRMESSRRR 333
HENPLI + Y P +R+E S+ R
Sbjct: 931 SLTDHENPLIYDLLINAYKP---NRLELSKNR 959
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 56.8 bits (131), Expect = 3e-08
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 4/152 (2%)
Frame = -1
Query: 776 LGVTLDSRXTFRPHIXXXXXXXXXXXR-LYPMICRRSKMSLRNKVTLYKTCIRPVMTYAS 600
LG+ LD R TF H+ + L +I + S + K+ L+K + P+ YA
Sbjct: 811 LGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAI 870
Query: 599 VVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFD 423
++ + K Q +++++ R + A + R D+ +++S + AS R+ +
Sbjct: 871 AIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFDEIFDKASQRYAN 930
Query: 422 KAARHENPLI--VAAGNYIPDPADRMESSRRR 333
HENPLI + Y P +R+E S+ R
Sbjct: 931 SLTDHENPLIYDLLINAYKP---NRLELSKNR 959
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 56.8 bits (131), Expect = 3e-08
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 4/152 (2%)
Frame = -1
Query: 776 LGVTLDSRXTFRPHIXXXXXXXXXXXR-LYPMICRRSKMSLRNKVTLYKTCIRPVMTYAS 600
LG+ LD R TF H+ + L +I + S + K+ L+K + P+ YA
Sbjct: 811 LGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAI 870
Query: 599 VVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFD 423
++ + K Q +++++ R + A + R D+ +++S + AS R+ +
Sbjct: 871 AIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFDEIFDKASQRYAN 930
Query: 422 KAARHENPLI--VAAGNYIPDPADRMESSRRR 333
HENPLI + Y P +R+E S+ R
Sbjct: 931 SLTDHENPLIYDLLINAYKP---NRLELSKNR 959
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 56.4 bits (130), Expect = 4e-08
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 4/152 (2%)
Frame = -1
Query: 776 LGVTLDSRXTFRPHIXXXXXXXXXXXR-LYPMICRRSKMSLRNKVTLYKTCIRPVMTYAS 600
LG+ LD R TF H+ + L +I + S + K+ L+K + P+ YA
Sbjct: 364 LGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAI 423
Query: 599 VVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFD 423
++ + K Q +++++ R + A + R D+ +++S + AS R+ +
Sbjct: 424 AIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFDETFDKASQRYAN 483
Query: 422 KAARHENPLI--VAAGNYIPDPADRMESSRRR 333
HENPLI + Y P +R+E S+ R
Sbjct: 484 SLTDHENPLIYDLLINAYKP---NRLELSKNR 512
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 53.6 bits (123), Expect = 3e-07
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 4/152 (2%)
Frame = -1
Query: 776 LGVTLDSRXTFRPHIXXXXXXXXXXXRLYPMICR-RSKMSLRNKVTLYKTCIRPVMTYAS 600
LGVTLDS+ T H+ R I RSK+ + K+ + K+ + P+ YA
Sbjct: 812 LGVTLDSKLTLSSHVTKLLGKYSTAYRKLTWILNGRSKLPTKTKILILKSVLSPIWQYAI 871
Query: 599 VVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFD 423
+ ++ Q+ ++R R A + RN + D ++++ ++ Q A R +
Sbjct: 872 AAWGPLVTDAQIRRVQVEENRKIRDICRAGRYTRNQTIRDLFGVKTVEEFYQQAMHRFSE 931
Query: 422 KAARHENPLI--VAAGNYIPDPADRMESSRRR 333
H N + + + +YIP +R+E SR+R
Sbjct: 932 TIKSHPNIAVRRILSRHYIP---NRLERSRQR 960
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial cds.
).
Length = 964
Score = 51.6 bits (118), Expect = 1e-06
Identities = 38/152 (25%), Positives = 69/152 (45%), Gaps = 4/152 (2%)
Frame = -1
Query: 776 LGVTLDSRXTFRPHIXXXXXXXXXXXRLYPMIC-RRSKMSLRNKVTLYKTCIRPVMTYAS 600
LGV LDS+ T PH+ R I RSK+ K+ + K+ + P+ YA
Sbjct: 684 LGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYAI 743
Query: 599 VVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFD 423
+ ++ Q+ ++R R A + +N + D ++++ ++ Q A R +
Sbjct: 744 AAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEEFYQQAVHRFSE 803
Query: 422 KAARHENPLI--VAAGNYIPDPADRMESSRRR 333
H N + + + +YIP +R+E SR+R
Sbjct: 804 TTKSHPNVAVRRIFSRHYIP---NRLERSRQR 832
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 51.6 bits (118), Expect = 1e-06
Identities = 38/152 (25%), Positives = 69/152 (45%), Gaps = 4/152 (2%)
Frame = -1
Query: 776 LGVTLDSRXTFRPHIXXXXXXXXXXXRLYPMIC-RRSKMSLRNKVTLYKTCIRPVMTYAS 600
LGV LDS+ T PH+ R I RSK+ K+ + K+ + P+ YA
Sbjct: 800 LGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYAI 859
Query: 599 VVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFD 423
+ ++ Q+ ++R R A + +N + D ++++ ++ Q A R +
Sbjct: 860 AAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEEFYQQAVHRFSE 919
Query: 422 KAARHENPLI--VAAGNYIPDPADRMESSRRR 333
H N + + + +YIP +R+E SR+R
Sbjct: 920 TTKSHPNVAVRRIFSRHYIP---NRLERSRQR 948
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 51.6 bits (118), Expect = 1e-06
Identities = 38/152 (25%), Positives = 69/152 (45%), Gaps = 4/152 (2%)
Frame = -1
Query: 776 LGVTLDSRXTFRPHIXXXXXXXXXXXRLYPMIC-RRSKMSLRNKVTLYKTCIRPVMTYAS 600
LGV LDS+ T PH+ R I RSK+ K+ + K+ + P+ YA
Sbjct: 800 LGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYAI 859
Query: 599 VVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFD 423
+ ++ Q+ ++R R A + +N + D ++++ ++ Q A R +
Sbjct: 860 AAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEEFYQQAVHRFSE 919
Query: 422 KAARHENPLI--VAAGNYIPDPADRMESSRRR 333
H N + + + +YIP +R+E SR+R
Sbjct: 920 TTKSHPNVAVRRIFSRHYIP---NRLERSRQR 948
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 51.6 bits (118), Expect = 1e-06
Identities = 38/152 (25%), Positives = 69/152 (45%), Gaps = 4/152 (2%)
Frame = -1
Query: 776 LGVTLDSRXTFRPHIXXXXXXXXXXXRLYPMIC-RRSKMSLRNKVTLYKTCIRPVMTYAS 600
LGV LDS+ T PH+ R I RSK+ K+ + K+ + P+ YA
Sbjct: 762 LGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYAI 821
Query: 599 VVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFD 423
+ ++ Q+ ++R R A + +N + D ++++ ++ Q A R +
Sbjct: 822 AAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEEFYQQAVHRFSE 881
Query: 422 KAARHENPLI--VAAGNYIPDPADRMESSRRR 333
H N + + + +YIP +R+E SR+R
Sbjct: 882 TTKSHPNVAVRRIFSRHYIP---NRLERSRQR 910
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 51.6 bits (118), Expect = 1e-06
Identities = 38/152 (25%), Positives = 69/152 (45%), Gaps = 4/152 (2%)
Frame = -1
Query: 776 LGVTLDSRXTFRPHIXXXXXXXXXXXRLYPMIC-RRSKMSLRNKVTLYKTCIRPVMTYAS 600
LGV LDS+ T PH+ R I RSK+ K+ + K+ + P+ YA
Sbjct: 800 LGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYAI 859
Query: 599 VVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFD 423
+ ++ Q+ ++R R A + +N + D ++++ ++ Q A R +
Sbjct: 860 AAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEEFYQQAVHRFSE 919
Query: 422 KAARHENPLI--VAAGNYIPDPADRMESSRRR 333
H N + + + +YIP +R+E SR+R
Sbjct: 920 TTKSHPNVAVRRIFSRHYIP---NRLERSRQR 948
>U14102-1|AAC46495.1| 299|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 299
Score = 50.0 bits (114), Expect = 4e-06
Identities = 38/152 (25%), Positives = 68/152 (44%), Gaps = 4/152 (2%)
Frame = -1
Query: 776 LGVTLDSRXTFRPHIXXXXXXXXXXXRLYPMIC-RRSKMSLRNKVTLYKTCIRPVMTYAS 600
LGV LDS+ T H+ R I RRSK+ + K+ + K+ + P+ YA
Sbjct: 15 LGVILDSKLTLSSHVTKLMGKYTTAYRKMTWILNRRSKLPTKTKMLILKSVLSPIWQYAI 74
Query: 599 VVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFD 423
+ ++ Q+ ++R R A + N + D ++++ ++ Q A R +
Sbjct: 75 AAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTSNQTIRDRYGIKTVEEFYQQALHRFSE 134
Query: 422 KAARHENPLI--VAAGNYIPDPADRMESSRRR 333
H N + + +YIP +R+E SR+R
Sbjct: 135 TIKSHPNIAVRRIFTRHYIP---NRLERSRQR 163
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 50.0 bits (114), Expect = 4e-06
Identities = 38/152 (25%), Positives = 68/152 (44%), Gaps = 4/152 (2%)
Frame = -1
Query: 776 LGVTLDSRXTFRPHIXXXXXXXXXXXRLYPMIC-RRSKMSLRNKVTLYKTCIRPVMTYAS 600
LGV LDS+ T H+ R I RRSK+ + K+ + K+ + P+ YA
Sbjct: 800 LGVILDSKLTLSSHVTKLMGKYTTAYRKMTWILNRRSKLPTKTKMLILKSVLSPIWQYAI 859
Query: 599 VVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFD 423
+ ++ Q+ ++R R A + N + D ++++ ++ Q A R +
Sbjct: 860 AAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTSNQTIRDRYGIKTVEEFYQQALHRFSE 919
Query: 422 KAARHENPLI--VAAGNYIPDPADRMESSRRR 333
H N + + +YIP +R+E SR+R
Sbjct: 920 TIKSHPNIAVRRIFTRHYIP---NRLERSRQR 948
>AY119084-1|AAM50944.1| 543|Drosophila melanogaster LP10938p
protein.
Length = 543
Score = 31.1 bits (67), Expect = 1.9
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +3
Query: 615 DGAYASFVECHLISKG-HFTSPTYHRVKTSRMKAXRSRTXDV 737
DG Y FVE LI G HF SPTY +T + + D+
Sbjct: 366 DGGYFLFVEGGLIDYGNHFNSPTYSLSETLQFEQAVQEALDI 407
>AY058505-1|AAL13734.1| 422|Drosophila melanogaster LD21309p
protein.
Length = 422
Score = 31.1 bits (67), Expect = 1.9
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -1
Query: 476 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 300
DLE ISKYL SA + + + +++A G +P + + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 299 L 297
+
Sbjct: 105 M 105
>AF325529-1|AAK01218.1| 422|Drosophila melanogaster elongation
initiation factor 5C protein.
Length = 422
Score = 31.1 bits (67), Expect = 1.9
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -1
Query: 476 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 300
DLE ISKYL SA + + + +++A G +P + + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 299 L 297
+
Sbjct: 105 M 105
>AE014297-297|AAN13249.1| 422|Drosophila melanogaster CG2922-PG,
isoform G protein.
Length = 422
Score = 31.1 bits (67), Expect = 1.9
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -1
Query: 476 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 300
DLE ISKYL SA + + + +++A G +P + + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 299 L 297
+
Sbjct: 105 M 105
>AE014297-296|AAN13248.1| 422|Drosophila melanogaster CG2922-PF,
isoform F protein.
Length = 422
Score = 31.1 bits (67), Expect = 1.9
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -1
Query: 476 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 300
DLE ISKYL SA + + + +++A G +P + + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 299 L 297
+
Sbjct: 105 M 105
>AE014297-295|AAN13247.1| 422|Drosophila melanogaster CG2922-PE,
isoform E protein.
Length = 422
Score = 31.1 bits (67), Expect = 1.9
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -1
Query: 476 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 300
DLE ISKYL SA + + + +++A G +P + + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 299 L 297
+
Sbjct: 105 M 105
>AE014297-294|AAN13246.1| 422|Drosophila melanogaster CG2922-PD,
isoform D protein.
Length = 422
Score = 31.1 bits (67), Expect = 1.9
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -1
Query: 476 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 300
DLE ISKYL SA + + + +++A G +P + + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 299 L 297
+
Sbjct: 105 M 105
>AE014297-293|AAF51995.1| 422|Drosophila melanogaster CG2922-PC,
isoform C protein.
Length = 422
Score = 31.1 bits (67), Expect = 1.9
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -1
Query: 476 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 300
DLE ISKYL SA + + + +++A G +P + + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 299 L 297
+
Sbjct: 105 M 105
>AE014297-292|AAG22214.1| 422|Drosophila melanogaster CG2922-PB,
isoform B protein.
Length = 422
Score = 31.1 bits (67), Expect = 1.9
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -1
Query: 476 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 300
DLE ISKYL SA + + + +++A G +P + + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 299 L 297
+
Sbjct: 105 M 105
>AE014297-291|AAF51996.1| 422|Drosophila melanogaster CG2922-PA,
isoform A protein.
Length = 422
Score = 31.1 bits (67), Expect = 1.9
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -1
Query: 476 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 300
DLE ISKYL SA + + + +++A G +P + + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 299 L 297
+
Sbjct: 105 M 105
>AE013599-3359|AAF46819.1| 543|Drosophila melanogaster CG3292-PA
protein.
Length = 543
Score = 31.1 bits (67), Expect = 1.9
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +3
Query: 615 DGAYASFVECHLISKG-HFTSPTYHRVKTSRMKAXRSRTXDV 737
DG Y FVE LI G HF SPTY +T + + D+
Sbjct: 366 DGGYFLFVEGGLIDYGNHFNSPTYSLSETLQFEQAVQEALDI 407
>AY118395-1|AAM48424.1| 268|Drosophila melanogaster RE53819p
protein.
Length = 268
Score = 29.1 bits (62), Expect = 7.6
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = -3
Query: 321 HLGSS*STNGAFRYFKHRSPFSSNPSLATKGSTSKLTLRHSPLSFSPDLLS 169
H GS+ NGAFR R F S+P+ +G +R + F+ DL++
Sbjct: 95 HYGSNWGWNGAFRQSVRRDNFISHPNWPAEGGRDIGLIRTPSVGFT-DLIN 144
>AE014296-1702|AAF50232.1| 268|Drosophila melanogaster CG18179-PA
protein.
Length = 268
Score = 29.1 bits (62), Expect = 7.6
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = -3
Query: 321 HLGSS*STNGAFRYFKHRSPFSSNPSLATKGSTSKLTLRHSPLSFSPDLLS 169
H GS+ NGAFR R F S+P+ +G +R + F+ DL++
Sbjct: 95 HYGSNWGWNGAFRQSVRRDNFISHPNWPAEGGRDIGLIRTPSVGFT-DLIN 144
>AE014134-843|AAF52203.1| 1940|Drosophila melanogaster CG16858-PA
protein.
Length = 1940
Score = 28.7 bits (61), Expect = 10.0
Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 2/23 (8%)
Frame = +3
Query: 501 PDEP--RGSDGYPAKTGLNNLKG 563
P EP +G GYP + G+N LKG
Sbjct: 1096 PGEPGAKGLGGYPGRNGINGLKG 1118
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,685,709
Number of Sequences: 53049
Number of extensions: 647256
Number of successful extensions: 1785
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1778
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3818998872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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