Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP05_T7_H01
(776 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC22A12.08c |||cardiolipin synthase/ hydrolase fusion protein ... 28 1.3
SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6 |Schizosacc... 27 3.0
SPCC330.06c |||thioredoxin peroxidase|Schizosaccharomyces pombe|... 27 3.0
SPBC29A3.14c |trt1||telomerase reverse transcriptase 1 protein T... 27 3.0
SPBC27B12.11c |||transcription factor |Schizosaccharomyces pombe... 27 4.0
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 26 5.2
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 26 5.2
SPAC26F1.12c |||conserved eukaryotic protein|Schizosaccharomyces... 26 5.2
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 26 6.9
SPAC458.03 |||nuclear telomere cap complex subunit |Schizosaccha... 26 6.9
SPAC57A7.07c |||homocysteine methyltransferase |Schizosaccharomy... 25 9.2
SPAC13G7.10 |mug152||transcription factor |Schizosaccharomyces p... 25 9.2
SPAPB1E7.06c |eme1||Holliday junction resolvase subunit Eme1|Sch... 25 9.2
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 25 9.2
>SPAC22A12.08c |||cardiolipin synthase/ hydrolase fusion protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 570
Score = 28.3 bits (60), Expect = 1.3
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 99 RNMARIYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVVVQYG 227
R +A Y+ + LGG++ S+ EK F + N DV+ + G
Sbjct: 112 RALADKYKHVLVLGGKDNSVRETAEKYGFKSVINELDVIAKLG 154
>SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 745
Score = 27.1 bits (57), Expect = 3.0
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = -1
Query: 254 CYFSTPPFDTVLYDNIRTVLKDNKTALLSASI 159
CY P + + L ++I+T+L DN ++ A++
Sbjct: 168 CYSLDPSYKSQLEEHIKTLLSDNSPIVVPAAL 199
>SPCC330.06c |||thioredoxin peroxidase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 156
Score = 27.1 bits (57), Expect = 3.0
Identities = 18/60 (30%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Frame = -3
Query: 648 YTNHPRLNIHFHQSPDAVXEGVRAGVKPPXSSEAPSAYLTPSSLGMXKGVSPPY-FQVND 472
+ N P + F + GV PP SS+ P Y+ KG+S Y VND
Sbjct: 14 WENKPEEVVEFPSQGKFIIVGVPGAFTPPCSSQVP-GYIANEKQFAAKGISGIYVVAVND 72
>SPBC29A3.14c |trt1||telomerase reverse transcriptase 1 protein Trt1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 988
Score = 27.1 bits (57), Expect = 3.0
Identities = 20/78 (25%), Positives = 34/78 (43%)
Frame = -1
Query: 353 KVKIADNNLVTHKELALKVSSIIGTRVYVFDPSCYFSTPPFDTVLYDNIRTVLKDNKTAL 174
K K+ D V K + +S T+ +V + YF PF+ V+ +K + T
Sbjct: 608 KKKLKDPEFVIRKYATIHATSDRATKNFVSEAFSYFDMVPFEKVVQ---LLSMKTSDTLF 664
Query: 173 LSASIQASLPSSEIYRQL 120
+ + SSEI++ L
Sbjct: 665 VDFVDYWTKSSSEIFKML 682
>SPBC27B12.11c |||transcription factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 738
Score = 26.6 bits (56), Expect = 4.0
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 7/63 (11%)
Frame = -3
Query: 735 YWXXRPYASSHPPXRXRXHQPRSSNPPIPYTNHPRLN---IHFHQSP----DAVXEGVRA 577
Y+ P + S P P S+N P Y+N P L+ I + SP DA + A
Sbjct: 129 YYHRSPSSDSFSPGVVASVNPNSNNSPTFYSNPPALSNIPIPLNNSPYRPEDAYFQLQGA 188
Query: 576 GVK 568
GVK
Sbjct: 189 GVK 191
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 26.2 bits (55), Expect = 5.2
Identities = 20/64 (31%), Positives = 28/64 (43%)
Frame = -2
Query: 706 PPSXAXSXTSTPIIKSPDSIHQPPQT*HPFPSIPXXXXXXXXXRGKASVVIRGSISVSHP 527
PP S TSTP + +P S+ PP P PS+P A+ + S ++ P
Sbjct: 404 PPLGNASRTSTPPVPTPPSL--PPSA--P-PSLPPSAPPSLPMGAPAAPPLPPSAPIAPP 458
Query: 526 LVTG 515
L G
Sbjct: 459 LPAG 462
>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 26.2 bits (55), Expect = 5.2
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -1
Query: 464 KLRALLVVIPRILRSPPPTHPLIEDV 387
KLR++L I ++LR P P PL+ +
Sbjct: 105 KLRSVLEQILQLLREPNPDDPLVASI 130
>SPAC26F1.12c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 356
Score = 26.2 bits (55), Expect = 5.2
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 4/48 (8%)
Frame = -3
Query: 654 IPYT--NHPRLNIHFHQSPDAVXEGVRAGV--KPPXSSEAPSAYLTPS 523
+PYT NHP+ +I FH + V + ++A + KP +S+A +A + S
Sbjct: 27 LPYTARNHPQFSIWFHNDFEPVKD-LKALLKDKPQIASQAVTALVNVS 73
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 25.8 bits (54), Expect = 6.9
Identities = 18/77 (23%), Positives = 27/77 (35%), Gaps = 2/77 (2%)
Frame = -3
Query: 705 HPPXRXRXHQPRSSNPPIPYTNHPRLNIHFHQSPDAVXEGVRAGVKPPXSSEAPSAYLTP 526
H P H+P PP P + P H P + + PP P ++ P
Sbjct: 271 HMPPPPMHHEPGEHMPPPPMHHEP----GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPP 326
Query: 525 SSLGMXKG--VSPPYFQ 481
+ G + PP F+
Sbjct: 327 PPMHHEPGEHMPPPPFK 343
>SPAC458.03 |||nuclear telomere cap complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 868
Score = 25.8 bits (54), Expect = 6.9
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -3
Query: 141 LRDLPPVGRSSPCFFRLLWSLRKILIPYSSQFW 43
L++L +G SPC RL L +++P FW
Sbjct: 21 LKELQHIGVPSPCNLRLYHELISVIVP---TFW 50
>SPAC57A7.07c |||homocysteine methyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 308
Score = 25.4 bits (53), Expect = 9.2
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -1
Query: 329 LVTHKELALKVSSIIGTRVYVFDPSCY 249
+V H E LKV II T Y D S Y
Sbjct: 37 VVKHHEEFLKVCDIISTFTYQLDASIY 63
>SPAC13G7.10 |mug152||transcription factor |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 390
Score = 25.4 bits (53), Expect = 9.2
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2
Query: 469 ITSFAPY*SSFHAYSAPLLQLTPSSKTSS 383
+ SF PY S F A P L ++PS+ +S
Sbjct: 302 LQSFHPYESLFSAGQPPSLPISPSTSQNS 330
>SPAPB1E7.06c |eme1||Holliday junction resolvase subunit
Eme1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 738
Score = 25.4 bits (53), Expect = 9.2
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = -1
Query: 740 NXIGRXALMHQATLPCDXGYINPDHQ-IPRFHTPTTPDLTSISINPLTP 597
N R +++ + P + P HQ FHTPT P T +S +P
Sbjct: 109 NPSSRVEIINLNSSPPNSLSSQPKHQEFHLFHTPTIPRTTQLSSKTSSP 157
>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 25.4 bits (53), Expect = 9.2
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +3
Query: 114 IYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVV 215
++Q A+ LG RS RC KSSF+ + DVV
Sbjct: 33 LHQQAL-LGRNGRSSKRCSPKSSFIRNSPKIDVV 65
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,927,569
Number of Sequences: 5004
Number of extensions: 58160
Number of successful extensions: 168
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 162
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 375345278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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