Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP05_T7_G15
(780 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX537991-1|CAD97950.1| 626|Homo sapiens hypothetical protein pr... 64 4e-10
AF077019-1|AAC27324.1| 671|Homo sapiens signal recognition part... 64 4e-10
AF069765-1|AAC97490.1| 671|Homo sapiens signal recognition part... 64 4e-10
AF038851-1|AAQ13423.1| 671|Homo sapiens putative signal recogni... 64 4e-10
U81554-1|AAB66908.1| 239|Homo sapiens CaM kinase II isoform pro... 37 0.071
BC105583-1|AAI05584.1| 560|Homo sapiens SRP72 protein protein. 37 0.071
BC046143-1|AAH46143.1| 559|Homo sapiens Similar to signal recog... 37 0.071
BC040134-1|AAH40134.1| 559|Homo sapiens SRP72 protein protein. 37 0.071
BC032609-1|AAH32609.1| 559|Homo sapiens SRP72 protein protein. 37 0.071
BC017057-1|AAH17057.1| 559|Homo sapiens SRP72 protein protein. 37 0.071
AB209421-1|BAD92658.1| 446|Homo sapiens amiloride-sensitive cat... 33 0.87
AK055141-1|BAB70862.1| 260|Homo sapiens protein ( Homo sapiens ... 30 8.1
>BX537991-1|CAD97950.1| 626|Homo sapiens hypothetical protein
protein.
Length = 626
Score = 64.5 bits (150), Expect = 4e-10
Identities = 42/131 (32%), Positives = 65/131 (49%), Gaps = 2/131 (1%)
Frame = -1
Query: 624 EALXAVEPRDARSLARLVKXXXXXXXXXXRSLAEQLPPLDQLETKIDIDALESSKWMMGA 445
+ L P+D +LA+L+ ++L++ LP D + K+D++ALE+S GA
Sbjct: 416 QQLWKQNPKDIHTLAQLISAYSLVDPEKAKALSKHLPSSDSMSLKVDVEALENSA---GA 472
Query: 444 KVV-KKTVQSKQEQSPGTPGSELGQXXXXXXXXXXKLPPNADLSKPPDPERWLPKYERTA 268
+ KK + + P G G KLP N D PDPERWLP ER+
Sbjct: 473 TYIRKKGGKVTGDSQPKEQGQ--GDLKKKKKKKKGKLPKNYDPKVTPDPERWLPMRERSY 530
Query: 267 YR-KRRGIRRD 238
YR +++G ++D
Sbjct: 531 YRGRKKGKKKD 541
>AF077019-1|AAC27324.1| 671|Homo sapiens signal recognition
particle 72 protein.
Length = 671
Score = 64.5 bits (150), Expect = 4e-10
Identities = 42/131 (32%), Positives = 65/131 (49%), Gaps = 2/131 (1%)
Frame = -1
Query: 624 EALXAVEPRDARSLARLVKXXXXXXXXXXRSLAEQLPPLDQLETKIDIDALESSKWMMGA 445
+ L P+D +LA+L+ ++L++ LP D + K+D++ALE+S GA
Sbjct: 471 QQLWKQNPKDIHTLAQLISAYSLVDPEKAKALSKHLPSSDSMSLKVDVEALENSA---GA 527
Query: 444 KVV-KKTVQSKQEQSPGTPGSELGQXXXXXXXXXXKLPPNADLSKPPDPERWLPKYERTA 268
+ KK + + P G G KLP N D PDPERWLP ER+
Sbjct: 528 TYIRKKGGKVTGDSQPKEQGQ--GDLKKKKKKKKGKLPKNYDPKVTPDPERWLPMRERSY 585
Query: 267 YR-KRRGIRRD 238
YR +++G ++D
Sbjct: 586 YRGRKKGKKKD 596
>AF069765-1|AAC97490.1| 671|Homo sapiens signal recognition
particle 72 protein.
Length = 671
Score = 64.5 bits (150), Expect = 4e-10
Identities = 42/131 (32%), Positives = 65/131 (49%), Gaps = 2/131 (1%)
Frame = -1
Query: 624 EALXAVEPRDARSLARLVKXXXXXXXXXXRSLAEQLPPLDQLETKIDIDALESSKWMMGA 445
+ L P+D +LA+L+ ++L++ LP D + K+D++ALE+S GA
Sbjct: 471 QQLWKQNPKDIHTLAQLISAYSLVDPEKAKALSKHLPSSDSMSLKVDVEALENSA---GA 527
Query: 444 KVV-KKTVQSKQEQSPGTPGSELGQXXXXXXXXXXKLPPNADLSKPPDPERWLPKYERTA 268
+ KK + + P G G KLP N D PDPERWLP ER+
Sbjct: 528 TYIRKKGGKVTGDSQPKEQGQ--GDLKKKKKKKKGKLPKNYDPKVTPDPERWLPMRERSY 585
Query: 267 YR-KRRGIRRD 238
YR +++G ++D
Sbjct: 586 YRGRKKGKKKD 596
>AF038851-1|AAQ13423.1| 671|Homo sapiens putative signal
recognition particle protein.
Length = 671
Score = 64.5 bits (150), Expect = 4e-10
Identities = 42/131 (32%), Positives = 65/131 (49%), Gaps = 2/131 (1%)
Frame = -1
Query: 624 EALXAVEPRDARSLARLVKXXXXXXXXXXRSLAEQLPPLDQLETKIDIDALESSKWMMGA 445
+ L P+D +LA+L+ ++L++ LP D + K+D++ALE+S GA
Sbjct: 471 QQLWKQNPKDIHTLAQLISAYSLVDPEKAKALSKHLPSSDSMSLKVDVEALENSA---GA 527
Query: 444 KVV-KKTVQSKQEQSPGTPGSELGQXXXXXXXXXXKLPPNADLSKPPDPERWLPKYERTA 268
+ KK + + P G G KLP N D PDPERWLP ER+
Sbjct: 528 TYIRKKGGKVTGDSQPKEQGQ--GDLKKKKKKKKGKLPKNYDPKVTPDPERWLPMRERSY 585
Query: 267 YR-KRRGIRRD 238
YR +++G ++D
Sbjct: 586 YRGRKKGKKKD 596
>U81554-1|AAB66908.1| 239|Homo sapiens CaM kinase II isoform
protein.
Length = 239
Score = 37.1 bits (82), Expect = 0.071
Identities = 19/65 (29%), Positives = 35/65 (53%)
Frame = -1
Query: 624 EALXAVEPRDARSLARLVKXXXXXXXXXXRSLAEQLPPLDQLETKIDIDALESSKWMMGA 445
+ L P+D +LA+L+ ++L++ LP D + K+D++ALE+S GA
Sbjct: 157 QQLWKQNPKDIHTLAQLISAYSLVDPEKAKALSKHLPSSDSMSLKVDVEALENS---AGA 213
Query: 444 KVVKK 430
++K
Sbjct: 214 TYIRK 218
>BC105583-1|AAI05584.1| 560|Homo sapiens SRP72 protein protein.
Length = 560
Score = 37.1 bits (82), Expect = 0.071
Identities = 19/65 (29%), Positives = 35/65 (53%)
Frame = -1
Query: 624 EALXAVEPRDARSLARLVKXXXXXXXXXXRSLAEQLPPLDQLETKIDIDALESSKWMMGA 445
+ L P+D +LA+L+ ++L++ LP D + K+D++ALE+S GA
Sbjct: 471 QQLWKQNPKDIHTLAQLISAYSLVDPEKAKALSKHLPSSDSMSLKVDVEALENS---AGA 527
Query: 444 KVVKK 430
++K
Sbjct: 528 TYIRK 532
>BC046143-1|AAH46143.1| 559|Homo sapiens Similar to signal
recognition particle 72kDa protein.
Length = 559
Score = 37.1 bits (82), Expect = 0.071
Identities = 19/65 (29%), Positives = 35/65 (53%)
Frame = -1
Query: 624 EALXAVEPRDARSLARLVKXXXXXXXXXXRSLAEQLPPLDQLETKIDIDALESSKWMMGA 445
+ L P+D +LA+L+ ++L++ LP D + K+D++ALE+S GA
Sbjct: 471 QQLWKQNPKDIHTLAQLISAYSLVDPEKAKALSKHLPSSDSMSLKVDVEALENS---AGA 527
Query: 444 KVVKK 430
++K
Sbjct: 528 TYIRK 532
>BC040134-1|AAH40134.1| 559|Homo sapiens SRP72 protein protein.
Length = 559
Score = 37.1 bits (82), Expect = 0.071
Identities = 19/65 (29%), Positives = 35/65 (53%)
Frame = -1
Query: 624 EALXAVEPRDARSLARLVKXXXXXXXXXXRSLAEQLPPLDQLETKIDIDALESSKWMMGA 445
+ L P+D +LA+L+ ++L++ LP D + K+D++ALE+S GA
Sbjct: 471 QQLWKQNPKDIHTLAQLISAYSLVDPEKAKALSKHLPSSDSMSLKVDVEALENS---AGA 527
Query: 444 KVVKK 430
++K
Sbjct: 528 TYIRK 532
>BC032609-1|AAH32609.1| 559|Homo sapiens SRP72 protein protein.
Length = 559
Score = 37.1 bits (82), Expect = 0.071
Identities = 19/65 (29%), Positives = 35/65 (53%)
Frame = -1
Query: 624 EALXAVEPRDARSLARLVKXXXXXXXXXXRSLAEQLPPLDQLETKIDIDALESSKWMMGA 445
+ L P+D +LA+L+ ++L++ LP D + K+D++ALE+S GA
Sbjct: 471 QQLWKQNPKDIHTLAQLISAYSLVDPEKAKALSKHLPSSDSMSLKVDVEALENS---AGA 527
Query: 444 KVVKK 430
++K
Sbjct: 528 TYIRK 532
>BC017057-1|AAH17057.1| 559|Homo sapiens SRP72 protein protein.
Length = 559
Score = 37.1 bits (82), Expect = 0.071
Identities = 19/65 (29%), Positives = 35/65 (53%)
Frame = -1
Query: 624 EALXAVEPRDARSLARLVKXXXXXXXXXXRSLAEQLPPLDQLETKIDIDALESSKWMMGA 445
+ L P+D +LA+L+ ++L++ LP D + K+D++ALE+S GA
Sbjct: 471 QQLWKQNPKDIHTLAQLISAYSLVDPEKAKALSKHLPSSDSMSLKVDVEALENS---AGA 527
Query: 444 KVVKK 430
++K
Sbjct: 528 TYIRK 532
>AB209421-1|BAD92658.1| 446|Homo sapiens amiloride-sensitive cation
channel 3 isoform c variant protein.
Length = 446
Score = 33.5 bits (73), Expect = 0.87
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -2
Query: 521 SCRPWTSSRRKSILTPWNRR 462
+C PWTSS R S + PW+RR
Sbjct: 397 TCWPWTSSLRPSTMRPWSRR 416
>AK055141-1|BAB70862.1| 260|Homo sapiens protein ( Homo sapiens
cDNA FLJ30579 fis, clone BRAWH2006989, weakly similar to
DNA-DIRECTED RNA POLYMERASE II LARGEST SUBUNIT (EC
2.7.7.6). ).
Length = 260
Score = 30.3 bits (65), Expect = 8.1
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +2
Query: 140 SWQRSPG*AWSAVYSCHIDPWQWW 211
SW SP +++S H PW WW
Sbjct: 174 SWSHSPHSRSHSLWSSHSSPWFWW 197
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,803,282
Number of Sequences: 237096
Number of extensions: 1358983
Number of successful extensions: 3758
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3564
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3727
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9478778060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -