BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP05_T7_F20
(803 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 82 3e-15
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 82 3e-15
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 82 3e-15
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 82 3e-15
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 82 3e-15
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 82 3e-15
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 82 3e-15
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 82 3e-15
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 82 3e-15
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 82 3e-15
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 82 3e-15
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 82 3e-15
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 80 8e-15
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 79 2e-14
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 81.8 bits (193), Expect = 3e-15
Identities = 40/85 (47%), Positives = 53/85 (62%)
Frame = -2
Query: 553 GHGRHHRNKRRTFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA 374
G R + + +NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N +
Sbjct: 264 GTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRI 323
Query: 373 MLKLNPYAAVXEEESYLRAAQKEEL 299
MLKLNPYA + LR A+ +L
Sbjct: 324 MLKLNPYAKTMRRNTILRQARNHKL 348
Score = 57.2 bits (132), Expect = 6e-08
Identities = 30/75 (40%), Positives = 43/75 (57%)
Frame = -1
Query: 740 RGPXIIFKQGXRVXIGAXPQHXPVWSXXXXXXXXXXXLAPGGHXGRFVIWTQSAFGRLDP 561
RGP II+ + + I A ++ P + LAPGGH GRF IWT+SAF +LD
Sbjct: 204 RGPCIIYNEDNGI-IKAF-RNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDE 261
Query: 560 LFGSWKTPSKQKKNF 516
L+G+W+ + K N+
Sbjct: 262 LYGTWRKAASLKSNY 276
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 81.8 bits (193), Expect = 3e-15
Identities = 40/85 (47%), Positives = 53/85 (62%)
Frame = -2
Query: 553 GHGRHHRNKRRTFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA 374
G R + + +NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N +
Sbjct: 265 GTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRI 324
Query: 373 MLKLNPYAAVXEEESYLRAAQKEEL 299
MLKLNPYA + LR A+ +L
Sbjct: 325 MLKLNPYAKTMRRNTILRQARNHKL 349
Score = 57.2 bits (132), Expect = 6e-08
Identities = 30/75 (40%), Positives = 43/75 (57%)
Frame = -1
Query: 740 RGPXIIFKQGXRVXIGAXPQHXPVWSXXXXXXXXXXXLAPGGHXGRFVIWTQSAFGRLDP 561
RGP II+ + + I A ++ P + LAPGGH GRF IWT+SAF +LD
Sbjct: 205 RGPCIIYNEDNGI-IKAF-RNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDE 262
Query: 560 LFGSWKTPSKQKKNF 516
L+G+W+ + K N+
Sbjct: 263 LYGTWRKAASLKSNY 277
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 81.8 bits (193), Expect = 3e-15
Identities = 40/85 (47%), Positives = 53/85 (62%)
Frame = -2
Query: 553 GHGRHHRNKRRTFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA 374
G R + + +NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N +
Sbjct: 265 GTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRI 324
Query: 373 MLKLNPYAAVXEEESYLRAAQKEEL 299
MLKLNPYA + LR A+ +L
Sbjct: 325 MLKLNPYAKTMRRNTILRQARNHKL 349
Score = 57.2 bits (132), Expect = 6e-08
Identities = 30/75 (40%), Positives = 43/75 (57%)
Frame = -1
Query: 740 RGPXIIFKQGXRVXIGAXPQHXPVWSXXXXXXXXXXXLAPGGHXGRFVIWTQSAFGRLDP 561
RGP II+ + + I A ++ P + LAPGGH GRF IWT+SAF +LD
Sbjct: 205 RGPCIIYNEDNGI-IKAF-RNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDE 262
Query: 560 LFGSWKTPSKQKKNF 516
L+G+W+ + K N+
Sbjct: 263 LYGTWRKAASLKSNY 277
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 81.8 bits (193), Expect = 3e-15
Identities = 40/85 (47%), Positives = 53/85 (62%)
Frame = -2
Query: 553 GHGRHHRNKRRTFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA 374
G R + + +NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N +
Sbjct: 265 GTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRI 324
Query: 373 MLKLNPYAAVXEEESYLRAAQKEEL 299
MLKLNPYA + LR A+ +L
Sbjct: 325 MLKLNPYAKTMRRNTILRQARNHKL 349
Score = 57.2 bits (132), Expect = 6e-08
Identities = 30/75 (40%), Positives = 43/75 (57%)
Frame = -1
Query: 740 RGPXIIFKQGXRVXIGAXPQHXPVWSXXXXXXXXXXXLAPGGHXGRFVIWTQSAFGRLDP 561
RGP II+ + + I A ++ P + LAPGGH GRF IWT+SAF +LD
Sbjct: 205 RGPCIIYNEDNGI-IKAF-RNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDE 262
Query: 560 LFGSWKTPSKQKKNF 516
L+G+W+ + K N+
Sbjct: 263 LYGTWRKAASLKSNY 277
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 81.8 bits (193), Expect = 3e-15
Identities = 40/85 (47%), Positives = 53/85 (62%)
Frame = -2
Query: 553 GHGRHHRNKRRTFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA 374
G R + + +NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N +
Sbjct: 265 GTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRI 324
Query: 373 MLKLNPYAAVXEEESYLRAAQKEEL 299
MLKLNPYA + LR A+ +L
Sbjct: 325 MLKLNPYAKTMRRNTILRQARNHKL 349
Score = 57.2 bits (132), Expect = 6e-08
Identities = 30/75 (40%), Positives = 43/75 (57%)
Frame = -1
Query: 740 RGPXIIFKQGXRVXIGAXPQHXPVWSXXXXXXXXXXXLAPGGHXGRFVIWTQSAFGRLDP 561
RGP II+ + + I A ++ P + LAPGGH GRF IWT+SAF +LD
Sbjct: 205 RGPCIIYNEDNGI-IKAF-RNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDE 262
Query: 560 LFGSWKTPSKQKKNF 516
L+G+W+ + K N+
Sbjct: 263 LYGTWRKAASLKSNY 277
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 81.8 bits (193), Expect = 3e-15
Identities = 40/85 (47%), Positives = 53/85 (62%)
Frame = -2
Query: 553 GHGRHHRNKRRTFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA 374
G R + + +NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N +
Sbjct: 265 GTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRI 324
Query: 373 MLKLNPYAAVXEEESYLRAAQKEEL 299
MLKLNPYA + LR A+ +L
Sbjct: 325 MLKLNPYAKTMRRNTILRQARNHKL 349
Score = 57.2 bits (132), Expect = 6e-08
Identities = 30/75 (40%), Positives = 43/75 (57%)
Frame = -1
Query: 740 RGPXIIFKQGXRVXIGAXPQHXPVWSXXXXXXXXXXXLAPGGHXGRFVIWTQSAFGRLDP 561
RGP II+ + + I A ++ P + LAPGGH GRF IWT+SAF +LD
Sbjct: 205 RGPCIIYNEDNGI-IKAF-RNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDE 262
Query: 560 LFGSWKTPSKQKKNF 516
L+G+W+ + K N+
Sbjct: 263 LYGTWRKAASLKSNY 277
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 81.8 bits (193), Expect = 3e-15
Identities = 40/85 (47%), Positives = 53/85 (62%)
Frame = -2
Query: 553 GHGRHHRNKRRTFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA 374
G R + + +NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N +
Sbjct: 265 GTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRI 324
Query: 373 MLKLNPYAAVXEEESYLRAAQKEEL 299
MLKLNPYA + LR A+ +L
Sbjct: 325 MLKLNPYAKTMRRNTILRQARNHKL 349
Score = 57.2 bits (132), Expect = 6e-08
Identities = 30/75 (40%), Positives = 43/75 (57%)
Frame = -1
Query: 740 RGPXIIFKQGXRVXIGAXPQHXPVWSXXXXXXXXXXXLAPGGHXGRFVIWTQSAFGRLDP 561
RGP II+ + + I A ++ P + LAPGGH GRF IWT+SAF +LD
Sbjct: 205 RGPCIIYNEDNGI-IKAF-RNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDE 262
Query: 560 LFGSWKTPSKQKKNF 516
L+G+W+ + K N+
Sbjct: 263 LYGTWRKAASLKSNY 277
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 81.8 bits (193), Expect = 3e-15
Identities = 40/85 (47%), Positives = 53/85 (62%)
Frame = -2
Query: 553 GHGRHHRNKRRTFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA 374
G R + + +NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N +
Sbjct: 265 GTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRI 324
Query: 373 MLKLNPYAAVXEEESYLRAAQKEEL 299
MLKLNPYA + LR A+ +L
Sbjct: 325 MLKLNPYAKTMRRNTILRQARNHKL 349
Score = 57.2 bits (132), Expect = 6e-08
Identities = 30/75 (40%), Positives = 43/75 (57%)
Frame = -1
Query: 740 RGPXIIFKQGXRVXIGAXPQHXPVWSXXXXXXXXXXXLAPGGHXGRFVIWTQSAFGRLDP 561
RGP II+ + + I A ++ P + LAPGGH GRF IWT+SAF +LD
Sbjct: 205 RGPCIIYNEDNGI-IKAF-RNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDE 262
Query: 560 LFGSWKTPSKQKKNF 516
L+G+W+ + K N+
Sbjct: 263 LYGTWRKAASLKSNY 277
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 81.8 bits (193), Expect = 3e-15
Identities = 40/85 (47%), Positives = 53/85 (62%)
Frame = -2
Query: 553 GHGRHHRNKRRTFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA 374
G R + + +NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N +
Sbjct: 265 GTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRI 324
Query: 373 MLKLNPYAAVXEEESYLRAAQKEEL 299
MLKLNPYA + LR A+ +L
Sbjct: 325 MLKLNPYAKTMRRNTILRQARNHKL 349
Score = 57.2 bits (132), Expect = 6e-08
Identities = 30/75 (40%), Positives = 43/75 (57%)
Frame = -1
Query: 740 RGPXIIFKQGXRVXIGAXPQHXPVWSXXXXXXXXXXXLAPGGHXGRFVIWTQSAFGRLDP 561
RGP II+ + + I A ++ P + LAPGGH GRF IWT+SAF +LD
Sbjct: 205 RGPCIIYNEDNGI-IKAF-RNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDE 262
Query: 560 LFGSWKTPSKQKKNF 516
L+G+W+ + K N+
Sbjct: 263 LYGTWRKAASLKSNY 277
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 81.8 bits (193), Expect = 3e-15
Identities = 40/85 (47%), Positives = 53/85 (62%)
Frame = -2
Query: 553 GHGRHHRNKRRTFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA 374
G R + + +NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N +
Sbjct: 265 GTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRI 324
Query: 373 MLKLNPYAAVXEEESYLRAAQKEEL 299
MLKLNPYA + LR A+ +L
Sbjct: 325 MLKLNPYAKTMRRNTILRQARNHKL 349
Score = 57.2 bits (132), Expect = 6e-08
Identities = 30/75 (40%), Positives = 43/75 (57%)
Frame = -1
Query: 740 RGPXIIFKQGXRVXIGAXPQHXPVWSXXXXXXXXXXXLAPGGHXGRFVIWTQSAFGRLDP 561
RGP II+ + + I A ++ P + LAPGGH GRF IWT+SAF +LD
Sbjct: 205 RGPCIIYNEDNGI-IKAF-RNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDE 262
Query: 560 LFGSWKTPSKQKKNF 516
L+G+W+ + K N+
Sbjct: 263 LYGTWRKAASLKSNY 277
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 81.8 bits (193), Expect = 3e-15
Identities = 40/85 (47%), Positives = 53/85 (62%)
Frame = -2
Query: 553 GHGRHHRNKRRTFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA 374
G R + + +NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N +
Sbjct: 265 GTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRI 324
Query: 373 MLKLNPYAAVXEEESYLRAAQKEEL 299
MLKLNPYA + LR A+ +L
Sbjct: 325 MLKLNPYAKTMRRNTILRQARNHKL 349
Score = 57.2 bits (132), Expect = 6e-08
Identities = 30/75 (40%), Positives = 43/75 (57%)
Frame = -1
Query: 740 RGPXIIFKQGXRVXIGAXPQHXPVWSXXXXXXXXXXXLAPGGHXGRFVIWTQSAFGRLDP 561
RGP II+ + + I A ++ P + LAPGGH GRF IWT+SAF +LD
Sbjct: 205 RGPCIIYNEDNGI-IKAF-RNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDE 262
Query: 560 LFGSWKTPSKQKKNF 516
L+G+W+ + K N+
Sbjct: 263 LYGTWRKAASLKSNY 277
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 81.8 bits (193), Expect = 3e-15
Identities = 40/85 (47%), Positives = 53/85 (62%)
Frame = -2
Query: 553 GHGRHHRNKRRTFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA 374
G R + + +NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N +
Sbjct: 265 GTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRI 324
Query: 373 MLKLNPYAAVXEEESYLRAAQKEEL 299
MLKLNPYA + LR A+ +L
Sbjct: 325 MLKLNPYAKTMRRNTILRQARNHKL 349
Score = 57.2 bits (132), Expect = 6e-08
Identities = 30/75 (40%), Positives = 43/75 (57%)
Frame = -1
Query: 740 RGPXIIFKQGXRVXIGAXPQHXPVWSXXXXXXXXXXXLAPGGHXGRFVIWTQSAFGRLDP 561
RGP II+ + + I A ++ P + LAPGGH GRF IWT+SAF +LD
Sbjct: 205 RGPCIIYNEDNGI-IKAF-RNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDE 262
Query: 560 LFGSWKTPSKQKKNF 516
L+G+W+ + K N+
Sbjct: 263 LYGTWRKAASLKSNY 277
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 80.2 bits (189), Expect = 8e-15
Identities = 39/85 (45%), Positives = 53/85 (62%)
Frame = -2
Query: 553 GHGRHHRNKRRTFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA 374
G R + + +NLP +M NTDL+R+LKS EI++ LRAP K++ R K NPL N +
Sbjct: 265 GTWRKAASLKSNYNLPMHEMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRI 324
Query: 373 MLKLNPYAAVXEEESYLRAAQKEEL 299
MLKLNPYA + LR A+ +L
Sbjct: 325 MLKLNPYAKTMRRNTILRQARNHKL 349
Score = 54.8 bits (126), Expect = 3e-07
Identities = 29/75 (38%), Positives = 42/75 (56%)
Frame = -1
Query: 740 RGPXIIFKQGXRVXIGAXPQHXPVWSXXXXXXXXXXXLAPGGHXGRFVIWTQSAFGRLDP 561
RGP II+ + + I A ++ P + LAPGGH GRF IW +SAF +LD
Sbjct: 205 RGPCIIYNEDNGI-IKAF-RNIPGITLLNVSKLNILKLAPGGHVGRFCIWIESAFRKLDE 262
Query: 560 LFGSWKTPSKQKKNF 516
L+G+W+ + K N+
Sbjct: 263 LYGTWRKAASLKSNY 277
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 78.6 bits (185), Expect = 2e-14
Identities = 39/85 (45%), Positives = 52/85 (61%)
Frame = -2
Query: 553 GHGRHHRNKRRTFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA 374
G R + + +NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N +
Sbjct: 279 GTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRI 338
Query: 373 MLKLNPYAAVXEEESYLRAAQKEEL 299
MLKLNPYA + L A+ +L
Sbjct: 339 MLKLNPYAKTMRRNTILCQARNHKL 363
Score = 57.2 bits (132), Expect = 6e-08
Identities = 30/75 (40%), Positives = 43/75 (57%)
Frame = -1
Query: 740 RGPXIIFKQGXRVXIGAXPQHXPVWSXXXXXXXXXXXLAPGGHXGRFVIWTQSAFGRLDP 561
RGP II+ + + I A ++ P + LAPGGH GRF IWT+SAF +LD
Sbjct: 219 RGPCIIYNEDNGI-IKAF-RNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDE 276
Query: 560 LFGSWKTPSKQKKNF 516
L+G+W+ + K N+
Sbjct: 277 LYGTWRKAASLKSNY 291
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,997,486
Number of Sequences: 237096
Number of extensions: 1643105
Number of successful extensions: 2773
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2568
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2773
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9924838204
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -