Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP05_T7_F18
(791 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB1A11.02 |||esterase/lipase |Schizosaccharomyces pombe|chr 1... 38 0.002
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po... 29 0.76
SPCC1322.14c |vtc4||vacuolar transporter chaperone |Schizosaccha... 28 1.3
SPAC144.17c |||6-phosphofructo-2-kinase|Schizosaccharomyces pomb... 28 1.8
SPBC839.14c |||methyltransferase |Schizosaccharomyces pombe|chr ... 27 3.1
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 27 3.1
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 3.1
SPAC11G7.05c |||[acyl-carrier protein] S-malonyltransferase Mct1... 27 3.1
SPAC1D4.03c |aut12||autophagy associated protein Aut12|Schizosac... 27 4.1
SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3 B... 26 7.1
SPAPB1A10.09 |ase1||microtubule-associated protein Ase1 |Schizos... 26 7.1
SPBC685.03 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 7.1
SPAC24C9.11 |||MIF4G/MA4 domain protein|Schizosaccharomyces pomb... 25 9.4
>SPAPB1A11.02 |||esterase/lipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 339
Score = 37.9 bits (84), Expect = 0.002
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = -2
Query: 412 PRDPYLSP-YWADDELLKMFPPVRILTVHLDPCLDDCVMFAKKLKTLGNVVGIEVLEGLP 236
P+ P ++P Y+ K PP DP D+ + + K LK GN + V EG+P
Sbjct: 246 PKSPLVNPLYYPTGH--KDLPPSFFQCCGWDPLRDEGIAYEKALKAAGNETRLIVYEGVP 303
Query: 235 HGFLNFSLMVKEAXRGFE 182
H F + M+ + FE
Sbjct: 304 HCFWVYYPMLSLRKKYFE 321
>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 897
Score = 29.1 bits (62), Expect = 0.76
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -3
Query: 528 PTSRGPAPSSGPHRKTWRHARIWML**LAVRP 433
P S+ P SS RK WR R+W RP
Sbjct: 74 PPSKNPTSSSLSTRKRWRQKRLWSFKNFPFRP 105
>SPCC1322.14c |vtc4||vacuolar transporter chaperone
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 721
Score = 28.3 bits (60), Expect = 1.3
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Frame = +3
Query: 273 PSVFNFLANITQSSRHGSKCTVNILTGG-NILSSSSSAQYGD---R*GSRGTENMNSS 434
P+ F+ +QS H S + N+LT N + Y D R GS T N NS+
Sbjct: 483 PATHTFIQGRSQSGTHSSSVSANVLTDSENTPIHADGDNYVDEESRIGSSSTRNDNST 540
>SPAC144.17c |||6-phosphofructo-2-kinase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 432
Score = 27.9 bits (59), Expect = 1.8
Identities = 23/95 (24%), Positives = 44/95 (46%)
Frame = -2
Query: 550 GAMQTRLAYITGSSAIVRPTQEDLAARTNLDALIARSPSEEFIFSVPRDPYLSPYWADDE 371
G + +R+ ++ + + R + L + ++ L R P ++ + S Y AD
Sbjct: 243 GYLLSRILFLLMNMTLARK-RIFLVPKASMRPLKLREPEDDI-----ENRQFSEYVAD-R 295
Query: 370 LLKMFPPVRILTVHLDPCLDDCVMFAKKLKTLGNV 266
+ K FP V +H+ C++D VM + LG+V
Sbjct: 296 IRKSFPDVSFKNLHVLSCMEDSVM--SPFRELGSV 328
>SPBC839.14c |||methyltransferase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 238
Score = 27.1 bits (57), Expect = 3.1
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +2
Query: 566 RFTYSGFNLHPVVGALLFSWDC*RFSATSVLEFPIRSPSASHR 694
RFT +GF +H V +F + S+TSV+ F I PS + +
Sbjct: 197 RFTKNGFIVHSTVPVPVFEFQGSTGSSTSVIAFQI-DPSFNRK 238
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 27.1 bits (57), Expect = 3.1
Identities = 24/86 (27%), Positives = 37/86 (43%)
Frame = +3
Query: 255 SMPTTFPSVFNFLANITQSSRHGSKCTVNILTGGNILSSSSSAQYGDR*GSRGTENMNSS 434
S P T S+F+ T +S S + + NI SSSS Y G+ + +++SS
Sbjct: 483 STPVTSSSIFSTATEATDTSVQTSSAIYDSSSTSNIQSSSS--VYASSTGALSSNSLSSS 540
Query: 435 DGLRAIRASKFVRAAKSSCVGLTMAL 512
++ S A+ S T AL
Sbjct: 541 TS--SVSTSYIPNASSSVYASSTEAL 564
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.1 bits (57), Expect = 3.1
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +3
Query: 246 SNTSMPTTFPSVFNFLANITQSSRHGSKCTVNILTGGNILSSSSSA 383
S++S+P+TF SV + L++ T S S + T S+S+S+
Sbjct: 565 SSSSIPSTFSSVSSILSSSTSSPSSTSLSISSSSTSSTFSSASTSS 610
>SPAC11G7.05c |||[acyl-carrier protein] S-malonyltransferase Mct1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 318
Score = 27.1 bits (57), Expect = 3.1
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = +2
Query: 641 SATSVLEFPIRSPSASHRCWLLYSVSAPRSQYHCPARNALKN 766
S TS L +RS WL S A S+Y PAR++LKN
Sbjct: 183 SITSTLSELVRSLGKLRSNWLDVS-GAFHSRYMLPARDSLKN 223
>SPAC1D4.03c |aut12||autophagy associated protein
Aut12|Schizosaccharomyces pombe|chr 1|||Manual
Length = 513
Score = 26.6 bits (56), Expect = 4.1
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 318 HGSKCTVNILTGGNILSSSSSAQYGDR*GSRGTENMNS 431
H S+C +L GN+L ++ S D+ SR T + S
Sbjct: 23 HESECGSLLLNPGNVLMAAPSVSEDDQEVSRSTPELRS 60
>SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3
Brl1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 692
Score = 25.8 bits (54), Expect = 7.1
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = -2
Query: 613 EGPDNRMKIKTRISEAATGFMGAMQTRLAYITGSSAIVRPTQEDLAARTNLDALIA 446
EG NR+ I RI + TG M + I+ SSA+ + + + L ++ A
Sbjct: 400 EGYSNRLCIWDRIERSKTGEMNNVLDEKEEISASSALEKLIKNNSCLEAELPSMYA 455
>SPAPB1A10.09 |ase1||microtubule-associated protein Ase1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 731
Score = 25.8 bits (54), Expect = 7.1
Identities = 28/82 (34%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +3
Query: 192 RFASLTMREKLRNP*GRPSNTSMPTTFPSVFNFLANITQSSRHGSKCTVNILTGGNILSS 371
R AS M R P R NT P+ S A T + RH + ++I N S
Sbjct: 510 RSASRAMTSP-RTPLPRVKNTQNPSRSISAEPPSATSTANRRHPTANRIDINARLNSASR 568
Query: 372 SSSAQYGDR*GSRGTE-NMNSS 434
S SA R G+ G++ NM+SS
Sbjct: 569 SRSANM-IRQGANGSDSNMSSS 589
>SPBC685.03 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 452
Score = 25.8 bits (54), Expect = 7.1
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +3
Query: 246 SNTSMPTTFPSVFNFLANITQSSRHGSKCTVNI 344
+N+S+PTT+PS NIT +S S+ VNI
Sbjct: 377 TNSSIPTTYPSNSTTYQNIT-TSYPWSQPVVNI 408
>SPAC24C9.11 |||MIF4G/MA4 domain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 775
Score = 25.4 bits (53), Expect = 9.4
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -2
Query: 709 IEQPTTMARRGRSNRKLQYTGRRKPLTVPTEEEGPDNR 596
I + + ARRG+ N L + +RK + + G +NR
Sbjct: 20 IGESDSSARRGKRNHNLPHREKRKFARISRGKNGYENR 57
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,360,914
Number of Sequences: 5004
Number of extensions: 74668
Number of successful extensions: 215
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 215
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 385381248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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