Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP05_T7_F18
(791 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0446 - 3371829-3372132,3374691-3375673 33 0.20
06_01_0107 - 854756-854883,855126-856968 31 0.79
04_01_0419 + 5555264-5555808,5556582-5556903,5557011-5557271 31 0.79
10_08_0977 - 21985149-21985277,21985348-21985722,21985824-219858... 29 3.2
03_06_0299 + 32956737-32957129,32957250-32957442,32957537-32958117 29 3.2
07_01_1037 - 9026198-9026586,9026773-9026937,9027010-9027096,902... 29 4.2
02_01_0657 - 4888723-4890156 29 4.2
11_06_0741 - 26826931-26827022,26827660-26829470,26829772-26830610 29 5.6
07_01_1153 - 10842259-10842390,10843348-10845315 29 5.6
06_01_1049 + 8257930-8258316 28 7.4
01_07_0131 + 41292800-41293400,41293522-41293649,41293759-412940... 28 7.4
11_06_0196 + 21144094-21144483 28 9.8
11_01_0762 + 6400052-6401845,6401977-6402609 28 9.8
07_03_1469 - 26742772-26743848 28 9.8
06_01_0725 + 5305839-5306279,5306816-5307028,5307229-5307675,530... 28 9.8
04_04_1023 + 30201374-30201487,30201601-30202285,30202402-302025... 28 9.8
04_04_0775 - 27989704-27990281,27990407-27990653,27990743-279908... 28 9.8
02_05_0306 - 27741506-27741994 28 9.8
>07_01_0446 - 3371829-3372132,3374691-3375673
Length = 428
Score = 33.5 bits (73), Expect = 0.20
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 8/118 (6%)
Frame = -2
Query: 499 RPTQEDLAARTNLDALIARSPSEEFI-FSVP----RD-PYLSPYWADDELLKMFPPVRIL 338
RPT +LAA A + R + + ++P +D P ++P+ L+ R+L
Sbjct: 206 RPTPSELAAPAT--AFLTRDMCDRYCRLALPAGADKDHPLVNPFGPASRSLEAVDVGRVL 263
Query: 337 TVHLDPCL--DDCVMFAKKLKTLGNVVGIEVLEGLPHGFLNFSLMVKEAXRGFETLRR 170
V D L D V +A+++K +G V + V G H F M E +RR
Sbjct: 264 VVAADGDLLRDKNVEYAERMKAMGKDVELVVFAGEEHAFFGVKPMSAATGELVEVIRR 321
>06_01_0107 - 854756-854883,855126-856968
Length = 656
Score = 31.5 bits (68), Expect = 0.79
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -2
Query: 355 PPVRILTVHLDPCLDDCVMFAKKLKTLGNVVGIEVLEGLPHG 230
PPV L +L P DC +FA G++ ++E PHG
Sbjct: 171 PPVTALLAYLSPRRTDCFLFAGHAD--GSIAAHRLIESSPHG 210
>04_01_0419 + 5555264-5555808,5556582-5556903,5557011-5557271
Length = 375
Score = 31.5 bits (68), Expect = 0.79
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Frame = -2
Query: 454 LIARSPSEEFIFSVPRDPYLSPY--WADDELLKMFPPVRILTVHLDPCLDDCVMFAKKLK 281
L +R P + D Y SP W D L+M P + C D +AK++K
Sbjct: 134 LYSREPGRAVKYHCNFDLYQSPVANWRDTLYLRMAPDPPPAADLPEICRDALFEYAKQVK 193
Query: 280 TLGNVVGIEVLEGL 239
LGN + + EGL
Sbjct: 194 NLGNTLFELLSEGL 207
>10_08_0977 -
21985149-21985277,21985348-21985722,21985824-21985874,
21985964-21986189,21986289-21986359,21986430-21986549,
21986641-21986835,21986921-21986985,21987894-21987984,
21988700-21988761,21988854-21988904,21989172-21989273,
21989873-21989980,21990071-21990134,21990246-21990392
Length = 618
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = -2
Query: 505 IVRPTQEDLAARTNLDALIARSPSEEFIFSVPRDPYLSPYWADDELLKM 359
IV +Q D+ N+D +IAR +EF S P +LS + L K+
Sbjct: 246 IVNRSQADI--NKNIDMIIARRKEQEFFASSPEYSHLSSRMGSEYLAKL 292
>03_06_0299 + 32956737-32957129,32957250-32957442,32957537-32958117
Length = 388
Score = 29.5 bits (63), Expect = 3.2
Identities = 20/79 (25%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +2
Query: 269 VSECFQFFGEHHAIVQARVQMYSQYPDG-WEHLEQFIIGPVRRQIRVPRHREYELFGRTA 445
V++ + G A+ ++R + S YP G E+++ + VR + V E+E+ T
Sbjct: 169 VADGLRALGYDAAVCRSRWEKTSSYPAGEHEYIDAVVGEEVRLIVEVDFRSEFEVARSTK 228
Query: 446 SYQSIQIRACRQVFLCGPD 502
+Y++ ++A +F+ PD
Sbjct: 229 AYRA-ALQALPPLFVGTPD 246
>07_01_1037 -
9026198-9026586,9026773-9026937,9027010-9027096,
9027173-9027245,9027947-9028012,9028096-9028194,
9028710-9028772,9028959-9029345
Length = 442
Score = 29.1 bits (62), Expect = 4.2
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = -2
Query: 526 YITGSSAIVRPTQEDLAARTNLDALIARSPSEEFIFSVPRDPYLSPYWADDELLKMF 356
+ITG+ IV PTQE+ ++ +N DA + + S P W DD+L ++F
Sbjct: 388 FITGTLGIVLPTQEN-SSVSNSDATTLSAS----LHSQPNKMASVTEWTDDQLSELF 439
>02_01_0657 - 4888723-4890156
Length = 477
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -2
Query: 496 PTQEDLAARTNLDALIARSPSEEFIFSVPRDPYLS 392
P ++DL AR L L A S ++ F +P +PY+S
Sbjct: 176 PPEDDLDARLTLPGLPAMSVADVPSFLLPSNPYMS 210
>11_06_0741 - 26826931-26827022,26827660-26829470,26829772-26830610
Length = 913
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = -2
Query: 337 TVHLDPCLDDCVMFAKKLKTLGNVVGIEVLEGLPHGFLNFSL 212
++HL+PC +D K LK GN++ + + L G + +
Sbjct: 761 SIHLEPCSEDYKYTLKSLKLHGNLLQLPLFVTLLSGLIELCI 802
>07_01_1153 - 10842259-10842390,10843348-10845315
Length = 699
Score = 28.7 bits (61), Expect = 5.6
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Frame = +3
Query: 498 LTMALDPVM*ASLVCIAPMKPV-AASXXXXXXXXXXS--GPSSSVGTVNGFRRPVYWSFL 668
+T+A+ P+ A PMKP+ AS + G SS+ GT+N + WSF
Sbjct: 209 ITVAMAPIKVAR-----PMKPLFTASYNLTSVITDVAYVGFSSATGTINVRHCVLGWSFA 263
Query: 669 FDLPLRAIVVGCSIQFPPLG 728
+ P AI +G + P +G
Sbjct: 264 INSPASAINLGKLPKLPRMG 283
>06_01_1049 + 8257930-8258316
Length = 128
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/36 (44%), Positives = 17/36 (47%)
Frame = -1
Query: 560 RLHGRDADQAGLHHGVQRHRQAHTGRLGGTHEFGCS 453
R H RDA G +GV RH L G H GCS
Sbjct: 90 RSHERDAGSRG-SYGVLRHCVVGDSWLVGVHGMGCS 124
>01_07_0131 +
41292800-41293400,41293522-41293649,41293759-41294019,
41294154-41294416,41294507-41294831
Length = 525
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -1
Query: 470 HEFGCSDSSQSVRRVHILGASGPLSVSVLG 381
H SD + +VRRV LG S PL+V+ G
Sbjct: 68 HPGSVSDVAATVRRVFQLGRSSPLTVAARG 97
>11_06_0196 + 21144094-21144483
Length = 129
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -3
Query: 573 VKRPPASWARCRPGWPTSRGPAPS 502
V +PPA+ A +P WP R P+PS
Sbjct: 88 VIKPPAA-AVAKPPWPQPRSPSPS 110
>11_01_0762 + 6400052-6401845,6401977-6402609
Length = 808
Score = 27.9 bits (59), Expect = 9.8
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = -1
Query: 335 CTFGPVPGRLRDVRQKIENTRKRCRHRSVRGPASRIPQ--FLSHGQG 201
C F P R+R VR+ ++ TRK+C VR PA + FLS+ G
Sbjct: 131 CKF-PEEWRMRSVRKYLQYTRKKC----VRDPAPLAEKRTFLSYAAG 172
>07_03_1469 - 26742772-26743848
Length = 358
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/52 (28%), Positives = 21/52 (40%)
Frame = -2
Query: 373 ELLKMFPPVRILTVHLDPCLDDCVMFAKKLKTLGNVVGIEVLEGLPHGFLNF 218
EL + FPP ++ DP D + L+ G V + HGF F
Sbjct: 280 ELAEAFPPAMVVIGGFDPLQDWQRRYVDVLRRKGKAVEVAEFPDAFHGFYGF 331
>06_01_0725 +
5305839-5306279,5306816-5307028,5307229-5307675,
5307768-5307917,5308185-5308486,5309718-5309758,
5311294-5311968,5312343-5312386
Length = 770
Score = 27.9 bits (59), Expect = 9.8
Identities = 36/117 (30%), Positives = 48/117 (41%), Gaps = 7/117 (5%)
Frame = -1
Query: 554 HGRDADQAGLHHGVQRHRQAHTGRLGGTHEFGCSDSSQSVRRVHILGASGPLSVSVLGR* 375
HG D D + HG R RQ H G G + GCS + V I+ + + S +GR
Sbjct: 21 HGDDDDDYVVLHGCDRRRQ-HYGH-GRSCLHGCSGVRAAGGLVRIVSGARHVR-SAVGRY 77
Query: 374 *TAQDVPTRQDIDCTFG-------PVPGRLRDVRQKIENTRKRCRHRSVRGPASRIP 225
A D D + + G V LR R++ R+R R R VR S P
Sbjct: 78 LAAADDDEEHD-ELSVGDKVLIAADVVVGLRRGRRRHRRRRRRLRPRRVRSRRSGPP 133
>04_04_1023 +
30201374-30201487,30201601-30202285,30202402-30202506,
30202561-30203939
Length = 760
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -3
Query: 618 KRRAPTTG*RLKPE*VKRPPASWARCRPGWPTSRGPAPSS 499
+R APT+ V+ PPA R RP T PAP++
Sbjct: 169 RRAAPTSKIETGDVAVEAPPAPTTRRRPQTSTEAAPAPTT 208
>04_04_0775 -
27989704-27990281,27990407-27990653,27990743-27990837,
27990918-27992388,27993142-27993194,27993295-27993430
Length = 859
Score = 27.9 bits (59), Expect = 9.8
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = -2
Query: 529 AYITGSSAIVRPTQEDLAARTN--LDALIARSPSEEFIFSVPRDP 401
A IT SA + T AR N LDAL S +EEF + +DP
Sbjct: 184 AVITHQSANGKYTSSSYEARPNEFLDALQLLSANEEFFLMLLKDP 228
>02_05_0306 - 27741506-27741994
Length = 162
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = -2
Query: 295 AKKLKTLGNVVGIEVLEGLPHGFLNFSLMVKEAXRGFETLRRENEAVI 152
A+ + G V G+ +L+GLPHG L+ A G RR V+
Sbjct: 6 ARLIAVGGAVFGVALLQGLPHG-PAVQLVSLPARAGLHAARRRRRRVL 52
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,886,911
Number of Sequences: 37544
Number of extensions: 588903
Number of successful extensions: 1730
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1729
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2138915688
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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