Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP05_T7_F18
(791 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT003200-1|AAO24955.1| 881|Drosophila melanogaster RE52776p pro... 149 6e-36
AY051867-1|AAK93291.1| 507|Drosophila melanogaster LD36294p pro... 149 6e-36
AE013599-2980|AAM68400.1| 881|Drosophila melanogaster CG11055-P... 149 6e-36
AE013599-2979|AAF57495.1| 881|Drosophila melanogaster CG11055-P... 149 6e-36
AE013599-2978|AAF57494.1| 881|Drosophila melanogaster CG11055-P... 149 6e-36
AM412833-1|CAL85456.1| 437|Drosophila melanogaster CG7219 prote... 31 1.4
AM412835-1|CAL85458.1| 437|Drosophila melanogaster CG7219 prote... 31 1.8
AM412834-1|CAL85457.1| 437|Drosophila melanogaster CG7219 prote... 31 1.8
AM412832-1|CAL85455.1| 437|Drosophila melanogaster CG7219 prote... 31 1.8
AE014134-1376|AAF52588.2| 536|Drosophila melanogaster CG7219-PA... 31 1.8
AY051414-1|AAK92838.1| 821|Drosophila melanogaster GH09326p pro... 31 2.4
AE014297-2099|AAF55244.2| 1417|Drosophila melanogaster CG31183-P... 31 2.4
U77645-1|AAB39742.1| 412|Drosophila melanogaster Rca1 protein. 30 4.2
AY058372-1|AAL13601.1| 411|Drosophila melanogaster GH14043p pro... 30 4.2
AE014134-1180|AAF52448.1| 411|Drosophila melanogaster CG10800-P... 30 4.2
X89858-1|CAA61954.1| 1201|Drosophila melanogaster actin binding ... 29 9.6
BT010247-1|AAQ23565.1| 1508|Drosophila melanogaster RE40452p pro... 29 9.6
AY069520-1|AAL39665.1| 1239|Drosophila melanogaster LD23793p pro... 29 9.6
AJ312135-1|CAC39164.1| 1531|Drosophila melanogaster turtle prote... 29 9.6
AJ312134-1|CAC39163.1| 903|Drosophila melanogaster turtle prote... 29 9.6
AJ312133-1|CAC39162.1| 749|Drosophila melanogaster turtle prote... 29 9.6
AJ312132-1|CAC39161.1| 377|Drosophila melanogaster turtle prote... 29 9.6
AF536543-1|AAN77184.1| 960|Drosophila melanogaster SR-related C... 29 9.6
AE014296-2867|AAX52741.1| 960|Drosophila melanogaster CG33522-P... 29 9.6
AE014134-718|AAF51031.3| 377|Drosophila melanogaster CG15427-PA... 29 9.6
AE014134-717|AAF51030.3| 903|Drosophila melanogaster CG15427-PC... 29 9.6
AE014134-716|AAN11173.1| 902|Drosophila melanogaster CG15427-PE... 29 9.6
AE014134-715|AAF51029.3| 1508|Drosophila melanogaster CG15427-PD... 29 9.6
AE013599-457|AAM71099.1| 1212|Drosophila melanogaster CG2092-PA,... 29 9.6
AE013599-456|AAF59225.3| 1239|Drosophila melanogaster CG2092-PB,... 29 9.6
>BT003200-1|AAO24955.1| 881|Drosophila melanogaster RE52776p protein.
Length = 881
Score = 149 bits (360), Expect = 6e-36
Identities = 73/136 (53%), Positives = 94/136 (69%), Gaps = 2/136 (1%)
Frame = -2
Query: 589 IKTRISEAATGFMGAMQ--TRLAYITGSSAIVRPTQEDLAARTNLDALIARSPSEEFIFS 416
++ R+ EA + T+ I GS+ + Q+D+ N+DALIARSPSEEF F
Sbjct: 710 LQGRLQEAVNNITNTLTRCTQSYEIHGSNVMA---QQDVR---NMDALIARSPSEEFAFD 763
Query: 415 VPRDPYLSPYWADDELLKMFPPVRILTVHLDPCLDDCVMFAKKLKTLGNVVGIEVLEGLP 236
VP+DP+LSPYWA DE L P +ILT+++DPCLDDCVMFAKKLK LG V +E+LEGLP
Sbjct: 764 VPKDPFLSPYWASDEWLSQLPETKILTLNMDPCLDDCVMFAKKLKRLGRQVDLEILEGLP 823
Query: 235 HGFLNFSLMVKEAXRG 188
HGFLNF+++ EA G
Sbjct: 824 HGFLNFTMLSNEAMEG 839
>AY051867-1|AAK93291.1| 507|Drosophila melanogaster LD36294p
protein.
Length = 507
Score = 149 bits (360), Expect = 6e-36
Identities = 73/136 (53%), Positives = 94/136 (69%), Gaps = 2/136 (1%)
Frame = -2
Query: 589 IKTRISEAATGFMGAMQ--TRLAYITGSSAIVRPTQEDLAARTNLDALIARSPSEEFIFS 416
++ R+ EA + T+ I GS+ + Q+D+ N+DALIARSPSEEF F
Sbjct: 336 LQGRLQEAVNNITNTLTRCTQSYEIHGSNVMA---QQDVR---NMDALIARSPSEEFAFD 389
Query: 415 VPRDPYLSPYWADDELLKMFPPVRILTVHLDPCLDDCVMFAKKLKTLGNVVGIEVLEGLP 236
VP+DP+LSPYWA DE L P +ILT+++DPCLDDCVMFAKKLK LG V +E+LEGLP
Sbjct: 390 VPKDPFLSPYWASDEWLSQLPETKILTLNMDPCLDDCVMFAKKLKRLGRQVDLEILEGLP 449
Query: 235 HGFLNFSLMVKEAXRG 188
HGFLNF+++ EA G
Sbjct: 450 HGFLNFTMLSNEAMEG 465
>AE013599-2980|AAM68400.1| 881|Drosophila melanogaster CG11055-PC,
isoform C protein.
Length = 881
Score = 149 bits (360), Expect = 6e-36
Identities = 73/136 (53%), Positives = 94/136 (69%), Gaps = 2/136 (1%)
Frame = -2
Query: 589 IKTRISEAATGFMGAMQ--TRLAYITGSSAIVRPTQEDLAARTNLDALIARSPSEEFIFS 416
++ R+ EA + T+ I GS+ + Q+D+ N+DALIARSPSEEF F
Sbjct: 710 LQGRLQEAVNNITNTLTRCTQSYEIHGSNVMA---QQDVR---NMDALIARSPSEEFAFD 763
Query: 415 VPRDPYLSPYWADDELLKMFPPVRILTVHLDPCLDDCVMFAKKLKTLGNVVGIEVLEGLP 236
VP+DP+LSPYWA DE L P +ILT+++DPCLDDCVMFAKKLK LG V +E+LEGLP
Sbjct: 764 VPKDPFLSPYWASDEWLSQLPETKILTLNMDPCLDDCVMFAKKLKRLGRQVDLEILEGLP 823
Query: 235 HGFLNFSLMVKEAXRG 188
HGFLNF+++ EA G
Sbjct: 824 HGFLNFTMLSNEAMEG 839
>AE013599-2979|AAF57495.1| 881|Drosophila melanogaster CG11055-PB,
isoform B protein.
Length = 881
Score = 149 bits (360), Expect = 6e-36
Identities = 73/136 (53%), Positives = 94/136 (69%), Gaps = 2/136 (1%)
Frame = -2
Query: 589 IKTRISEAATGFMGAMQ--TRLAYITGSSAIVRPTQEDLAARTNLDALIARSPSEEFIFS 416
++ R+ EA + T+ I GS+ + Q+D+ N+DALIARSPSEEF F
Sbjct: 710 LQGRLQEAVNNITNTLTRCTQSYEIHGSNVMA---QQDVR---NMDALIARSPSEEFAFD 763
Query: 415 VPRDPYLSPYWADDELLKMFPPVRILTVHLDPCLDDCVMFAKKLKTLGNVVGIEVLEGLP 236
VP+DP+LSPYWA DE L P +ILT+++DPCLDDCVMFAKKLK LG V +E+LEGLP
Sbjct: 764 VPKDPFLSPYWASDEWLSQLPETKILTLNMDPCLDDCVMFAKKLKRLGRQVDLEILEGLP 823
Query: 235 HGFLNFSLMVKEAXRG 188
HGFLNF+++ EA G
Sbjct: 824 HGFLNFTMLSNEAMEG 839
>AE013599-2978|AAF57494.1| 881|Drosophila melanogaster CG11055-PA,
isoform A protein.
Length = 881
Score = 149 bits (360), Expect = 6e-36
Identities = 73/136 (53%), Positives = 94/136 (69%), Gaps = 2/136 (1%)
Frame = -2
Query: 589 IKTRISEAATGFMGAMQ--TRLAYITGSSAIVRPTQEDLAARTNLDALIARSPSEEFIFS 416
++ R+ EA + T+ I GS+ + Q+D+ N+DALIARSPSEEF F
Sbjct: 710 LQGRLQEAVNNITNTLTRCTQSYEIHGSNVMA---QQDVR---NMDALIARSPSEEFAFD 763
Query: 415 VPRDPYLSPYWADDELLKMFPPVRILTVHLDPCLDDCVMFAKKLKTLGNVVGIEVLEGLP 236
VP+DP+LSPYWA DE L P +ILT+++DPCLDDCVMFAKKLK LG V +E+LEGLP
Sbjct: 764 VPKDPFLSPYWASDEWLSQLPETKILTLNMDPCLDDCVMFAKKLKRLGRQVDLEILEGLP 823
Query: 235 HGFLNFSLMVKEAXRG 188
HGFLNF+++ EA G
Sbjct: 824 HGFLNFTMLSNEAMEG 839
>AM412833-1|CAL85456.1| 437|Drosophila melanogaster CG7219 protein
protein.
Length = 437
Score = 31.5 bits (68), Expect = 1.4
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 518 RDVGQPGLHRAHEAGGRFTYSGFNLHP 598
R +PG H H A G FT +G++L+P
Sbjct: 106 RRAQRPGAHEVHLANGLFTQTGYSLNP 132
>AM412835-1|CAL85458.1| 437|Drosophila melanogaster CG7219 protein
protein.
Length = 437
Score = 31.1 bits (67), Expect = 1.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 518 RDVGQPGLHRAHEAGGRFTYSGFNLHP 598
R +PG H H A G FT +G+ L+P
Sbjct: 106 RRAQRPGAHEVHLANGLFTQTGYTLNP 132
>AM412834-1|CAL85457.1| 437|Drosophila melanogaster CG7219 protein
protein.
Length = 437
Score = 31.1 bits (67), Expect = 1.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 518 RDVGQPGLHRAHEAGGRFTYSGFNLHP 598
R +PG H H A G FT +G+ L+P
Sbjct: 106 RRAQRPGAHEVHLANGLFTQTGYTLNP 132
>AM412832-1|CAL85455.1| 437|Drosophila melanogaster CG7219 protein
protein.
Length = 437
Score = 31.1 bits (67), Expect = 1.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 518 RDVGQPGLHRAHEAGGRFTYSGFNLHP 598
R +PG H H A G FT +G+ L+P
Sbjct: 106 RRAQRPGAHEVHLANGLFTQTGYTLNP 132
>AE014134-1376|AAF52588.2| 536|Drosophila melanogaster CG7219-PA
protein.
Length = 536
Score = 31.1 bits (67), Expect = 1.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 518 RDVGQPGLHRAHEAGGRFTYSGFNLHP 598
R +PG H H A G FT +G+ L+P
Sbjct: 205 RRAQRPGAHEVHLANGLFTQTGYTLNP 231
>AY051414-1|AAK92838.1| 821|Drosophila melanogaster GH09326p
protein.
Length = 821
Score = 30.7 bits (66), Expect = 2.4
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -2
Query: 562 TGFMGAMQTRLAYITGSSAIVRPTQEDLAARTNLDALIARSP 437
TG MG+ Q R+ + G + PT LAA + ++A SP
Sbjct: 735 TGSMGSGQLRIKFAEGDETPLLPTPPPLAAPPPIPQMVAASP 776
>AE014297-2099|AAF55244.2| 1417|Drosophila melanogaster CG31183-PA
protein.
Length = 1417
Score = 30.7 bits (66), Expect = 2.4
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -2
Query: 562 TGFMGAMQTRLAYITGSSAIVRPTQEDLAARTNLDALIARSP 437
TG MG+ Q R+ + G + PT LAA + ++A SP
Sbjct: 1331 TGSMGSGQLRIKFAEGDETPLLPTPPPLAAPPPIPQMVAASP 1372
>U77645-1|AAB39742.1| 412|Drosophila melanogaster Rca1 protein.
Length = 412
Score = 29.9 bits (64), Expect = 4.2
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +3
Query: 192 RFASLTMREKLRNP*GRPSNTSMPTTFPSVFNFLANITQSSRHGSKCTVNIL 347
RF SL + E +P G P N + T+ F F N S G +C V L
Sbjct: 324 RFLSLDLDEVRTSPQGPPYNFAECTSVICQFRFCVNCLCKSHPGERCLVTEL 375
>AY058372-1|AAL13601.1| 411|Drosophila melanogaster GH14043p
protein.
Length = 411
Score = 29.9 bits (64), Expect = 4.2
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +3
Query: 192 RFASLTMREKLRNP*GRPSNTSMPTTFPSVFNFLANITQSSRHGSKCTVNIL 347
RF SL + E +P G P N + T+ F F N S G +C V L
Sbjct: 323 RFLSLDLDEVRTSPQGPPYNFAECTSVICQFRFCVNCLCKSHPGERCLVTEL 374
>AE014134-1180|AAF52448.1| 411|Drosophila melanogaster CG10800-PA
protein.
Length = 411
Score = 29.9 bits (64), Expect = 4.2
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +3
Query: 192 RFASLTMREKLRNP*GRPSNTSMPTTFPSVFNFLANITQSSRHGSKCTVNIL 347
RF SL + E +P G P N + T+ F F N S G +C V L
Sbjct: 323 RFLSLDLDEVRTSPQGPPYNFAECTSVICQFRFCVNCLCKSHPGERCLVTEL 374
>X89858-1|CAA61954.1| 1201|Drosophila melanogaster actin binding
protein protein.
Length = 1201
Score = 28.7 bits (61), Expect = 9.6
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -2
Query: 280 TLGNVVGIEVLEGLPHGFLNFSLMVKEAXRGFETL 176
TL V+G+ LEG+ H +N L V +GF T+
Sbjct: 1043 TLTQVLGVSPLEGVVHMKVNCELSVSVEYKGFLTM 1077
>BT010247-1|AAQ23565.1| 1508|Drosophila melanogaster RE40452p
protein.
Length = 1508
Score = 28.7 bits (61), Expect = 9.6
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = -3
Query: 276 SETLSASKC*RACLTDSSISLSWSRKRXEGSKLCV 172
S+TL+AS A T + SR+R EGS +CV
Sbjct: 60 SKTLTASPAKTAAFTVKTTRRRRSRRRAEGSSICV 94
>AY069520-1|AAL39665.1| 1239|Drosophila melanogaster LD23793p protein.
Length = 1239
Score = 28.7 bits (61), Expect = 9.6
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -2
Query: 280 TLGNVVGIEVLEGLPHGFLNFSLMVKEAXRGFETL 176
TL V+G+ LEG+ H +N L V +GF T+
Sbjct: 1081 TLTQVLGVSPLEGVVHMKVNCELSVSVEYKGFLTM 1115
>AJ312135-1|CAC39164.1| 1531|Drosophila melanogaster turtle protein,
isoform 4 protein.
Length = 1531
Score = 28.7 bits (61), Expect = 9.6
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = -3
Query: 276 SETLSASKC*RACLTDSSISLSWSRKRXEGSKLCV 172
S+TL+AS A T + SR+R EGS +CV
Sbjct: 60 SKTLTASPAKTAAFTVKTTRRRRSRRRAEGSSICV 94
>AJ312134-1|CAC39163.1| 903|Drosophila melanogaster turtle protein,
isoform 3 protein.
Length = 903
Score = 28.7 bits (61), Expect = 9.6
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = -3
Query: 276 SETLSASKC*RACLTDSSISLSWSRKRXEGSKLCV 172
S+TL+AS A T + SR+R EGS +CV
Sbjct: 60 SKTLTASPAKTAAFTVKTTRRRRSRRRAEGSSICV 94
>AJ312133-1|CAC39162.1| 749|Drosophila melanogaster turtle protein,
isoform 2 protein.
Length = 749
Score = 28.7 bits (61), Expect = 9.6
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = -3
Query: 276 SETLSASKC*RACLTDSSISLSWSRKRXEGSKLCV 172
S+TL+AS A T + SR+R EGS +CV
Sbjct: 60 SKTLTASPAKTAAFTVKTTRRRRSRRRAEGSSICV 94
>AJ312132-1|CAC39161.1| 377|Drosophila melanogaster turtle protein,
isoform 1 protein.
Length = 377
Score = 28.7 bits (61), Expect = 9.6
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = -3
Query: 276 SETLSASKC*RACLTDSSISLSWSRKRXEGSKLCV 172
S+TL+AS A T + SR+R EGS +CV
Sbjct: 60 SKTLTASPAKTAAFTVKTTRRRRSRRRAEGSSICV 94
>AF536543-1|AAN77184.1| 960|Drosophila melanogaster SR-related CTD
associated factor 6 protein.
Length = 960
Score = 28.7 bits (61), Expect = 9.6
Identities = 18/88 (20%), Positives = 36/88 (40%)
Frame = +2
Query: 158 CFILSTQSFEPSXRFLDHEREIEESVRQAL*HFDADNVSECFQFFGEHHAIVQARVQMYS 337
C I QS P +++ ++ + F + + + +HH +Q Q
Sbjct: 336 CVISKLQS--PDSSMQEYKTNLQNTHHDITAKFTQNTKATLDNYQKQHHVFIQHASQQIV 393
Query: 338 QYPDGWEHLEQFIIGPVRRQIRVPRHRE 421
Q +HLEQ I+ +Q + +H++
Sbjct: 394 QLEKQAQHLEQQIVAQKSQQQHMLQHQQ 421
>AE014296-2867|AAX52741.1| 960|Drosophila melanogaster CG33522-PA,
isoform A protein.
Length = 960
Score = 28.7 bits (61), Expect = 9.6
Identities = 18/88 (20%), Positives = 36/88 (40%)
Frame = +2
Query: 158 CFILSTQSFEPSXRFLDHEREIEESVRQAL*HFDADNVSECFQFFGEHHAIVQARVQMYS 337
C I QS P +++ ++ + F + + + +HH +Q Q
Sbjct: 336 CVISKLQS--PDSSMQEYKTNLQNTHHDITAKFTQNTKATLDNYQKQHHVFIQHASQQIV 393
Query: 338 QYPDGWEHLEQFIIGPVRRQIRVPRHRE 421
Q +HLEQ I+ +Q + +H++
Sbjct: 394 QLEKQAQHLEQQIVAQKSQQQHMLQHQQ 421
>AE014134-718|AAF51031.3| 377|Drosophila melanogaster CG15427-PA,
isoform A protein.
Length = 377
Score = 28.7 bits (61), Expect = 9.6
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = -3
Query: 276 SETLSASKC*RACLTDSSISLSWSRKRXEGSKLCV 172
S+TL+AS A T + SR+R EGS +CV
Sbjct: 60 SKTLTASPAKTAAFTVKTTRRRRSRRRAEGSSICV 94
>AE014134-717|AAF51030.3| 903|Drosophila melanogaster CG15427-PC,
isoform C protein.
Length = 903
Score = 28.7 bits (61), Expect = 9.6
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = -3
Query: 276 SETLSASKC*RACLTDSSISLSWSRKRXEGSKLCV 172
S+TL+AS A T + SR+R EGS +CV
Sbjct: 60 SKTLTASPAKTAAFTVKTTRRRRSRRRAEGSSICV 94
>AE014134-716|AAN11173.1| 902|Drosophila melanogaster CG15427-PE,
isoform E protein.
Length = 902
Score = 28.7 bits (61), Expect = 9.6
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = -3
Query: 276 SETLSASKC*RACLTDSSISLSWSRKRXEGSKLCV 172
S+TL+AS A T + SR+R EGS +CV
Sbjct: 60 SKTLTASPAKTAAFTVKTTRRRRSRRRAEGSSICV 94
>AE014134-715|AAF51029.3| 1508|Drosophila melanogaster CG15427-PD,
isoform D protein.
Length = 1508
Score = 28.7 bits (61), Expect = 9.6
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = -3
Query: 276 SETLSASKC*RACLTDSSISLSWSRKRXEGSKLCV 172
S+TL+AS A T + SR+R EGS +CV
Sbjct: 60 SKTLTASPAKTAAFTVKTTRRRRSRRRAEGSSICV 94
>AE013599-457|AAM71099.1| 1212|Drosophila melanogaster CG2092-PA,
isoform A protein.
Length = 1212
Score = 28.7 bits (61), Expect = 9.6
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -2
Query: 280 TLGNVVGIEVLEGLPHGFLNFSLMVKEAXRGFETL 176
TL V+G+ LEG+ H +N L V +GF T+
Sbjct: 1054 TLTQVLGVSPLEGVVHMKVNCELSVSVEYKGFLTM 1088
>AE013599-456|AAF59225.3| 1239|Drosophila melanogaster CG2092-PB,
isoform B protein.
Length = 1239
Score = 28.7 bits (61), Expect = 9.6
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -2
Query: 280 TLGNVVGIEVLEGLPHGFLNFSLMVKEAXRGFETL 176
TL V+G+ LEG+ H +N L V +GF T+
Sbjct: 1081 TLTQVLGVSPLEGVVHMKVNCELSVSVEYKGFLTM 1115
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,642,747
Number of Sequences: 53049
Number of extensions: 940387
Number of successful extensions: 2823
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 2661
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2822
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3675273108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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