Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP05_T7_F18
(791 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006619-3|AAK68253.1| 943|Caenorhabditis elegans Hypothetical ... 81 9e-16
U67956-4|AAB07693.1| 396|Caenorhabditis elegans Hypothetical pr... 32 0.41
AF101309-1|AAL32229.1| 1680|Caenorhabditis elegans Hypothetical ... 29 2.9
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 28 8.8
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 28 8.8
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 28 8.8
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 28 8.8
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 28 8.8
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 28 8.8
X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein. 28 8.8
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 28 8.8
>AC006619-3|AAK68253.1| 943|Caenorhabditis elegans Hypothetical
protein C46C11.1 protein.
Length = 943
Score = 81.0 bits (191), Expect = 9e-16
Identities = 38/90 (42%), Positives = 57/90 (63%), Gaps = 2/90 (2%)
Frame = -2
Query: 418 SVPRDPYLSPYWADDELLKMFPPVRILTVHLDPCLDDCVMFAKKLKTL-GNVVGIEVLEG 242
+VPRDP +SP +AD+E + PP + H+DP LDD + FA KL+ G V+ +++L
Sbjct: 847 TVPRDPLISPMYADNETMCQLPPCYFMACHMDPLLDDTISFAGKLRDAGGKVMSVDLLSS 906
Query: 241 LPHGFLNFSLMVKEAXR-GFETLRRENEAV 155
+PHGFLNF+L+ E + G + R EA+
Sbjct: 907 VPHGFLNFTLISPECKKSGQVCINRLKEAL 936
>U67956-4|AAB07693.1| 396|Caenorhabditis elegans Hypothetical
protein F16F9.4 protein.
Length = 396
Score = 32.3 bits (70), Expect = 0.41
Identities = 20/63 (31%), Positives = 34/63 (53%)
Frame = -2
Query: 460 DALIARSPSEEFIFSVPRDPYLSPYWADDELLKMFPPVRILTVHLDPCLDDCVMFAKKLK 281
+ L+ + +++FI + +P +SP + D E L PP +LT D D+ + +A KLK
Sbjct: 299 EKLVDQHLAKQFI-KLGTNPDVSPVFGDTEGL---PPALVLTAGYDVLKDEGIQYANKLK 354
Query: 280 TLG 272
G
Sbjct: 355 KSG 357
>AF101309-1|AAL32229.1| 1680|Caenorhabditis elegans Hypothetical
protein H24G06.1a protein.
Length = 1680
Score = 29.5 bits (63), Expect = 2.9
Identities = 30/118 (25%), Positives = 46/118 (38%), Gaps = 3/118 (2%)
Frame = +3
Query: 114 IGYRRPRAPRPNRITASFSRRKVSNPRFASLTMREKLRNP*GRPSNTSMPTTFPSVFNFL 293
IGYRRP + A +RR+V+ F + L S + P F + +
Sbjct: 1177 IGYRRPSTVTVDTRDADVARRRVAGTSFKKSDRADDLNFASSLRSRSQSPNKF--ALSQM 1234
Query: 294 ANITQSSRHGSKCTVNILTGGNILS--SSSSAQYGDR*GSRGTENM-NSSDGLRAIRA 458
N + S T + + G N+ S Y R +RG + M S+D L + A
Sbjct: 1235 INSRDTPSSPSSTTGSSIVGRNLQQRRRGSDVSY-VRSATRGRDEMRKSTDALNKLMA 1291
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -2
Query: 685 RRGRSNRKLQYTGRRKPLTVPTEEEGPDNRMKIKTRISEAATG 557
+ GR L G +K TVP +EG + + +I R ++A TG
Sbjct: 2091 KNGRWEEALVVPGDQKTATVPNLKEGEEYQFRISAR-NKAGTG 2132
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -2
Query: 685 RRGRSNRKLQYTGRRKPLTVPTEEEGPDNRMKIKTRISEAATG 557
+ GR L G +K TVP +EG + + +I R ++A TG
Sbjct: 2620 KNGRWEEALVVPGDQKTATVPNLKEGEEYQFRISAR-NKAGTG 2661
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -2
Query: 685 RRGRSNRKLQYTGRRKPLTVPTEEEGPDNRMKIKTRISEAATG 557
+ GR L G +K TVP +EG + + +I R ++A TG
Sbjct: 2301 KNGRWEEALVVPGDQKTATVPNLKEGEEYQFRISAR-NKAGTG 2342
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical protein
ZK617.1c protein.
Length = 6629
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -2
Query: 685 RRGRSNRKLQYTGRRKPLTVPTEEEGPDNRMKIKTRISEAATG 557
+ GR L G +K TVP +EG + + +I R ++A TG
Sbjct: 2091 KNGRWEEALVVPGDQKTATVPNLKEGEEYQFRISAR-NKAGTG 2132
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
ZK617.1b protein.
Length = 7158
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -2
Query: 685 RRGRSNRKLQYTGRRKPLTVPTEEEGPDNRMKIKTRISEAATG 557
+ GR L G +K TVP +EG + + +I R ++A TG
Sbjct: 2620 KNGRWEEALVVPGDQKTATVPNLKEGEEYQFRISAR-NKAGTG 2661
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical protein
ZK617.1a protein.
Length = 6839
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -2
Query: 685 RRGRSNRKLQYTGRRKPLTVPTEEEGPDNRMKIKTRISEAATG 557
+ GR L G +K TVP +EG + + +I R ++A TG
Sbjct: 2301 KNGRWEEALVVPGDQKTATVPNLKEGEEYQFRISAR-NKAGTG 2342
>X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.
Length = 6048
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -2
Query: 685 RRGRSNRKLQYTGRRKPLTVPTEEEGPDNRMKIKTRISEAATG 557
+ GR L G +K TVP +EG + + +I R ++A TG
Sbjct: 1510 KNGRWEEALVVPGDQKTATVPNLKEGEEYQFRISAR-NKAGTG 1551
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Frame = -1
Query: 563 HRLHGRDADQAGLHHGVQRHRQAHTGRLG--GTH 468
H HG G HHG H AH G G GTH
Sbjct: 516 HGHHGEHGTHHG-HHGEHHHAPAHHGHHGEHGTH 548
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,220,247
Number of Sequences: 27780
Number of extensions: 454238
Number of successful extensions: 1276
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1273
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -