Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP05_T7_F03
(803 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 146 1e-35
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 146 1e-35
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 146 1e-35
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 146 1e-35
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 146 1e-35
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 146 1e-35
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 144 9e-35
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 144 9e-35
AF016681-14|AAB66169.1| 1119|Caenorhabditis elegans Guanylyl cyc... 29 2.9
Z32679-5|CAA83594.2| 408|Caenorhabditis elegans Hypothetical pr... 29 5.1
AF038615-7|AAB94147.1| 479|Caenorhabditis elegans Hypothetical ... 28 9.0
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 146 bits (355), Expect = 1e-35
Identities = 77/170 (45%), Positives = 109/170 (64%), Gaps = 1/170 (0%)
Frame = -3
Query: 786 VKQRQKKAHIMESNXXGVPSRTK*N-GPENIWRNLSLSILCLPKMK*LTALVSPRAKDTK 610
+++RQKKAH++E G K + E++ + + + + + + + + R K
Sbjct: 171 LRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTV-FAQDEMIDTIGVTRGHGFK 229
Query: 609 VSLLVGTQRSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQ 430
+ P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+
Sbjct: 230 GVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGK 289
Query: 429 GIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 280
++G KNN STE+DL++K+ITPMGGFP YG VN D++M +G + G
Sbjct: 290 SALTEEG---KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 336
Score = 97.1 bits (231), Expect = 1e-20
Identities = 47/69 (68%), Positives = 54/69 (78%)
Frame = -1
Query: 296 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 117
+G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK
Sbjct: 331 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 390
Query: 116 KDRIREEAA 90
+D + E A
Sbjct: 391 RDFLAEAEA 399
Score = 90.2 bits (214), Expect = 1e-18
Identities = 43/65 (66%), Positives = 47/65 (72%)
Frame = -2
Query: 751 IQLXRGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPR 572
IQ+ GTIE KV WAREHLEK + VD+VFAQDEMID I TSRWHTKKLPR
Sbjct: 183 IQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 242
Query: 571 KTHQG 557
KTH+G
Sbjct: 243 KTHKG 247
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 146 bits (355), Expect = 1e-35
Identities = 77/170 (45%), Positives = 109/170 (64%), Gaps = 1/170 (0%)
Frame = -3
Query: 786 VKQRQKKAHIMESNXXGVPSRTK*N-GPENIWRNLSLSILCLPKMK*LTALVSPRAKDTK 610
+++RQKKAH++E G K + E++ + + + + + + + + R K
Sbjct: 171 LRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTV-FAQDEMIDTIGVTRGHGFK 229
Query: 609 VSLLVGTQRSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQ 430
+ P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+
Sbjct: 230 GVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGK 289
Query: 429 GIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 280
++G KNN STE+DL++K+ITPMGGFP YG VN D++M +G + G
Sbjct: 290 SALTEEG---KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 336
Score = 97.1 bits (231), Expect = 1e-20
Identities = 47/69 (68%), Positives = 54/69 (78%)
Frame = -1
Query: 296 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 117
+G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK
Sbjct: 331 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 390
Query: 116 KDRIREEAA 90
+D + E A
Sbjct: 391 RDFLAEAEA 399
Score = 90.2 bits (214), Expect = 1e-18
Identities = 43/65 (66%), Positives = 47/65 (72%)
Frame = -2
Query: 751 IQLXRGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPR 572
IQ+ GTIE KV WAREHLEK + VD+VFAQDEMID I TSRWHTKKLPR
Sbjct: 183 IQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 242
Query: 571 KTHQG 557
KTH+G
Sbjct: 243 KTHKG 247
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 146 bits (355), Expect = 1e-35
Identities = 77/170 (45%), Positives = 109/170 (64%), Gaps = 1/170 (0%)
Frame = -3
Query: 786 VKQRQKKAHIMESNXXGVPSRTK*N-GPENIWRNLSLSILCLPKMK*LTALVSPRAKDTK 610
+++RQKKAH++E G K + E++ + + + + + + + + R K
Sbjct: 73 LRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTV-FAQDEMIDTIGVTRGHGFK 131
Query: 609 VSLLVGTQRSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQ 430
+ P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+
Sbjct: 132 GVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGK 191
Query: 429 GIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 280
++G KNN STE+DL++K+ITPMGGFP YG VN D++M +G + G
Sbjct: 192 SALTEEG---KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 238
Score = 97.1 bits (231), Expect = 1e-20
Identities = 47/69 (68%), Positives = 54/69 (78%)
Frame = -1
Query: 296 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 117
+G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK
Sbjct: 233 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 292
Query: 116 KDRIREEAA 90
+D + E A
Sbjct: 293 RDFLAEAEA 301
Score = 90.2 bits (214), Expect = 1e-18
Identities = 43/65 (66%), Positives = 47/65 (72%)
Frame = -2
Query: 751 IQLXRGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPR 572
IQ+ GTIE KV WAREHLEK + VD+VFAQDEMID I TSRWHTKKLPR
Sbjct: 85 IQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 144
Query: 571 KTHQG 557
KTH+G
Sbjct: 145 KTHKG 149
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 146 bits (355), Expect = 1e-35
Identities = 77/170 (45%), Positives = 109/170 (64%), Gaps = 1/170 (0%)
Frame = -3
Query: 786 VKQRQKKAHIMESNXXGVPSRTK*N-GPENIWRNLSLSILCLPKMK*LTALVSPRAKDTK 610
+++RQKKAH++E G K + E++ + + + + + + + + R K
Sbjct: 171 LRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTV-FAQDEMIDTIGVTRGHGFK 229
Query: 609 VSLLVGTQRSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQ 430
+ P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+
Sbjct: 230 GVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGK 289
Query: 429 GIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 280
++G KNN STE+DL++K+ITPMGGFP YG VN D++M +G + G
Sbjct: 290 SALTEEG---KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 336
Score = 97.1 bits (231), Expect = 1e-20
Identities = 47/69 (68%), Positives = 54/69 (78%)
Frame = -1
Query: 296 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 117
+G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK
Sbjct: 331 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 390
Query: 116 KDRIREEAA 90
+D + E A
Sbjct: 391 RDFLAEAEA 399
Score = 90.2 bits (214), Expect = 1e-18
Identities = 43/65 (66%), Positives = 47/65 (72%)
Frame = -2
Query: 751 IQLXRGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPR 572
IQ+ GTIE KV WAREHLEK + VD+VFAQDEMID I TSRWHTKKLPR
Sbjct: 183 IQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 242
Query: 571 KTHQG 557
KTH+G
Sbjct: 243 KTHKG 247
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 146 bits (355), Expect = 1e-35
Identities = 77/170 (45%), Positives = 109/170 (64%), Gaps = 1/170 (0%)
Frame = -3
Query: 786 VKQRQKKAHIMESNXXGVPSRTK*N-GPENIWRNLSLSILCLPKMK*LTALVSPRAKDTK 610
+++RQKKAH++E G K + E++ + + + + + + + + R K
Sbjct: 73 LRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTV-FAQDEMIDTIGVTRGHGFK 131
Query: 609 VSLLVGTQRSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQ 430
+ P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+
Sbjct: 132 GVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGK 191
Query: 429 GIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 280
++G KNN STE+DL++K+ITPMGGFP YG VN D++M +G + G
Sbjct: 192 SALTEEG---KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 238
Score = 97.1 bits (231), Expect = 1e-20
Identities = 47/69 (68%), Positives = 54/69 (78%)
Frame = -1
Query: 296 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 117
+G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK
Sbjct: 233 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 292
Query: 116 KDRIREEAA 90
+D + E A
Sbjct: 293 RDFLAEAEA 301
Score = 90.2 bits (214), Expect = 1e-18
Identities = 43/65 (66%), Positives = 47/65 (72%)
Frame = -2
Query: 751 IQLXRGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPR 572
IQ+ GTIE KV WAREHLEK + VD+VFAQDEMID I TSRWHTKKLPR
Sbjct: 85 IQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 144
Query: 571 KTHQG 557
KTH+G
Sbjct: 145 KTHKG 149
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 146 bits (355), Expect = 1e-35
Identities = 77/170 (45%), Positives = 109/170 (64%), Gaps = 1/170 (0%)
Frame = -3
Query: 786 VKQRQKKAHIMESNXXGVPSRTK*N-GPENIWRNLSLSILCLPKMK*LTALVSPRAKDTK 610
+++RQKKAH++E G K + E++ + + + + + + + + R K
Sbjct: 171 LRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTV-FAQDEMIDTIGVTRGHGFK 229
Query: 609 VSLLVGTQRSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQ 430
+ P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+
Sbjct: 230 GVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGK 289
Query: 429 GIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 280
++G KNN STE+DL++K+ITPMGGFP YG VN D++M +G + G
Sbjct: 290 SALTEEG---KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 336
Score = 97.1 bits (231), Expect = 1e-20
Identities = 47/69 (68%), Positives = 54/69 (78%)
Frame = -1
Query: 296 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 117
+G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK
Sbjct: 331 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 390
Query: 116 KDRIREEAA 90
+D + E A
Sbjct: 391 RDFLAEAEA 399
Score = 90.2 bits (214), Expect = 1e-18
Identities = 43/65 (66%), Positives = 47/65 (72%)
Frame = -2
Query: 751 IQLXRGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPR 572
IQ+ GTIE KV WAREHLEK + VD+VFAQDEMID I TSRWHTKKLPR
Sbjct: 183 IQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 242
Query: 571 KTHQG 557
KTH+G
Sbjct: 243 KTHKG 247
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 144 bits (348), Expect = 9e-35
Identities = 65/102 (63%), Positives = 81/102 (79%)
Frame = -3
Query: 585 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 406
+ P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++G
Sbjct: 190 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEG- 248
Query: 405 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 280
KNN STE+DL++K+ITPMGGFP YG VN D++M +G + G
Sbjct: 249 --KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 288
Score = 97.1 bits (231), Expect = 1e-20
Identities = 47/69 (68%), Positives = 54/69 (78%)
Frame = -1
Query: 296 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 117
+G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK
Sbjct: 283 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 342
Query: 116 KDRIREEAA 90
+D + E A
Sbjct: 343 RDFLAEAEA 351
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/38 (55%), Positives = 23/38 (60%)
Frame = -2
Query: 670 VFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHQG 557
V A +MID I TSRWHTKKLPRKTH+G
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 199
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 144 bits (348), Expect = 9e-35
Identities = 65/102 (63%), Positives = 81/102 (79%)
Frame = -3
Query: 585 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 406
+ P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++G
Sbjct: 190 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEG- 248
Query: 405 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 280
KNN STE+DL++K+ITPMGGFP YG VN D++M +G + G
Sbjct: 249 --KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 288
Score = 97.1 bits (231), Expect = 1e-20
Identities = 47/69 (68%), Positives = 54/69 (78%)
Frame = -1
Query: 296 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 117
+G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK
Sbjct: 283 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 342
Query: 116 KDRIREEAA 90
+D + E A
Sbjct: 343 RDFLAEAEA 351
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/38 (55%), Positives = 23/38 (60%)
Frame = -2
Query: 670 VFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHQG 557
V A +MID I TSRWHTKKLPRKTH+G
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 199
>AF016681-14|AAB66169.1| 1119|Caenorhabditis elegans Guanylyl cyclase
protein 21 protein.
Length = 1119
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1
Query: 211 FSSAALFVCTRRDFLRVMIRFLGPMQQPLXHHKVVVYFTIM 333
FS LF+ + FL+++IR+L + P+ +H VV T M
Sbjct: 1049 FSLNKLFIV--KSFLKLLIRYLQMRRHPISNHNVVTVKTCM 1087
>Z32679-5|CAA83594.2| 408|Caenorhabditis elegans Hypothetical
protein C05B5.6 protein.
Length = 408
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = +3
Query: 159 ESTMTELGRGV-NEF--EVDLF*CSPLCMHTQRLSKSNDTLFRSHAATLXSSQSRCLLHH 329
++T LG G+ +EF +D F C +RLSK++ LFR + + C H
Sbjct: 288 QATSLSLGSGMFSEFFKHIDHFKSLKFCFFGKRLSKNHIELFRDNVIAKSVNLESCTFEH 347
>AF038615-7|AAB94147.1| 479|Caenorhabditis elegans Hypothetical
protein R02D3.7 protein.
Length = 479
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 6/54 (11%)
Frame = -2
Query: 154 RRLTRLHSWVHS--RRIVFA----KKLRLPQPQRGCCAALSVVRENKHLTMQKK 11
R +T++H+W + ++ A KK R CC + R KHL KK
Sbjct: 32 RHMTQIHNWTTEDCQELIAAIKSEKKSRASSTSFVCCHCRMIFRSVKHLVQHKK 85
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,393,782
Number of Sequences: 27780
Number of extensions: 428963
Number of successful extensions: 1165
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1157
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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