Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP05_T7_F02
(787 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1408 - 26353389-26355191 208 4e-54
03_03_0094 + 14378953-14380728 205 3e-53
06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,713... 31 1.0
02_04_0562 - 23886272-23886357,23886456-23886571,23887045-238871... 29 3.2
12_01_0400 + 3169597-3170504,3170510-3171269 29 5.5
06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,805... 28 7.3
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582... 28 7.3
04_04_1188 + 31579833-31579914,31580001-31580176,31580822-315809... 28 9.7
04_04_0876 - 29005543-29005630,29005841-29006596,29006939-29006955 28 9.7
03_05_0491 - 24868261-24869383,24869482-24869561,24870193-248702... 28 9.7
>07_03_1408 - 26353389-26355191
Length = 600
Score = 208 bits (508), Expect = 4e-54
Identities = 84/139 (60%), Positives = 121/139 (87%)
Frame = -1
Query: 748 GEKEGMXTMHDILDAQWSYENHKDETYLRRVIKPLEGLLIAHKRIFIKDSAVNAVCYGAK 569
GE++ M TMHD++DA+W+ +N+ DETYLRR++ PLE LL ++KR+ +KDSAVNA+CYGAK
Sbjct: 269 GEQDNMVTMHDVMDARWAMDNYNDETYLRRIVMPLEVLLTSYKRLVVKDSAVNAICYGAK 328
Query: 568 VLLPGILRYEDGIEVDQEIVIVTTKGEAVALAVALMTTSTMASCDHGVAAKLKRVIMERD 389
+++PG+LR+E+ I+V +E+V++TTKGEA+A+ +A MTT+ MA+CDHG AK+KRV+M+RD
Sbjct: 329 LMIPGLLRFENDIDVGEEVVLMTTKGEAIAIGIAEMTTAVMATCDHGAVAKIKRVVMDRD 388
Query: 388 TYPRKWGLGPKASQKKILI 332
TYPRKWGLGP A +KK ++
Sbjct: 389 TYPRKWGLGPVALKKKKMV 407
Score = 42.3 bits (95), Expect = 4e-04
Identities = 30/103 (29%), Positives = 43/103 (41%), Gaps = 1/103 (0%)
Frame = -2
Query: 348 RKKSSYKQGKLDKYGKPNENTPKEWLNSYVNYNVKKEPENGDG-VEEGSRKRTASTANAE 172
+KK +G LDK+GKPNE TP EW+ NV P GD + + + AE
Sbjct: 402 KKKKMVAEGLLDKHGKPNEKTPAEWIR-----NVAL-PTGGDAMIASIAAAPEEAKVKAE 455
Query: 171 DPDVSIEVKQEXXXXXXKRDSEAPAEADATMDTSESPETAEQP 43
V+ E +E +D E A+ + +A P
Sbjct: 456 QDVVATEEVKEKKKKKKHKDEEDAADEGRKRKIEDDDASASVP 498
>03_03_0094 + 14378953-14380728
Length = 591
Score = 205 bits (501), Expect = 3e-53
Identities = 84/139 (60%), Positives = 119/139 (85%)
Frame = -1
Query: 748 GEKEGMXTMHDILDAQWSYENHKDETYLRRVIKPLEGLLIAHKRIFIKDSAVNAVCYGAK 569
GE + M TMHD++DA+W+ +N DE+YLRR++ PLE LL ++KR+ +KDSAVNA+CYGAK
Sbjct: 273 GETDNMVTMHDVMDARWAMDNFNDESYLRRIVMPLEVLLTSYKRLVVKDSAVNAICYGAK 332
Query: 568 VLLPGILRYEDGIEVDQEIVIVTTKGEAVALAVALMTTSTMASCDHGVAAKLKRVIMERD 389
+++PG+LR+E+ IEV +E+V++TTKGEA+A+ +A MTT+ MA+CDHG AK+KRV+M+RD
Sbjct: 333 LMIPGLLRFENEIEVGEEVVLMTTKGEAIAIGIAEMTTAVMATCDHGAVAKIKRVVMDRD 392
Query: 388 TYPRKWGLGPKASQKKILI 332
TYPRKWGLGP A +KK ++
Sbjct: 393 TYPRKWGLGPVALKKKKMV 411
Score = 43.6 bits (98), Expect = 2e-04
Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = -2
Query: 348 RKKSSYKQGKLDKYGKPNENTPKEWLNSYVNYNVKKEPENGDGVEEG--SRKRTASTANA 175
+KK +G LDK+GKPNE TP EWL + V P GD + G +
Sbjct: 406 KKKKMVAEGLLDKHGKPNEKTPSEWLRNAV------LPAGGDAMIAGIAAAPEPEKPKVK 459
Query: 174 EDPDVSIEVKQE 139
E+ DV+ E K++
Sbjct: 460 EEADVAEETKEK 471
>06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,
7139996-7140076,7140805-7140895,7141242-7141330,
7141749-7141802,7141906-7142085,7142175-7142237,
7142575-7142705,7142807-7142900,7143343-7143684,
7143957-7144348,7145010-7148487,7149101-7149187,
7149324-7149367,7149495-7149591,7150429-7150572
Length = 1873
Score = 31.1 bits (67), Expect = 1.0
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = -2
Query: 243 KEPENGDGVEEGSRKRTASTANAEDPDVSIEVKQEXXXXXXKRDSEAPAEADATMDTS-E 67
K PE+ E+ S K A T EDP V++E + E + S P + +A ++ E
Sbjct: 1164 KLPEDSTTFEKPSEKDDAGTKQTEDP-VTLEKEPE-----EDKGSVEPTQDNAGLEKPLE 1217
Query: 66 SPETAEQPADDSV 28
E + +P++DSV
Sbjct: 1218 EDEASAKPSEDSV 1230
>02_04_0562 -
23886272-23886357,23886456-23886571,23887045-23887127,
23887683-23887829,23887946-23887993,23888166-23888384,
23889370-23889541,23889636-23889700,23890386-23890512,
23891358-23891450,23891520-23891629,23891722-23891868,
23892161-23892473,23892580-23893178
Length = 774
Score = 29.5 bits (63), Expect = 3.2
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Frame = -2
Query: 198 RTASTANAEDPDVSIEVKQEXXXXXXKRDSEA-PAEADATMD--TSESPETAEQPADDSV 28
RTASTA A P + IE +Q KR EA P E D ++ +S + + +SV
Sbjct: 112 RTASTATAGQPKLDIEDEQSEDQKQNKRKKEASPEECDQAVEGLSSAKAKAKAKQVQESV 171
Query: 27 R 25
+
Sbjct: 172 K 172
>12_01_0400 + 3169597-3170504,3170510-3171269
Length = 555
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +3
Query: 348 CEAFGPRPHFLGYVSRSIMTRFSFAATP 431
CEA P H Y +R + R S AATP
Sbjct: 212 CEATSPVDHLAYYFARGLKLRISGAATP 239
>06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,
8057595-8058314,8058404-8058603,8058988-8059172,
8059287-8059354,8059432-8060246,8060502-8060599,
8060702-8060887,8061358-8061538,8061651-8061812,
8061894-8061937,8062059-8062115,8062409-8062505,
8062614-8062786,8062868-8063081,8063270-8063395,
8064072-8064188,8064459-8064566,8064729-8064898,
8065049-8065127,8065211-8065285,8065845-8065942,
8066030-8066137,8066238-8066295,8066527-8066631,
8067461-8069516,8069804-8070697,8070896-8071852,
8072022-8072075,8072157-8072222,8072294-8073472,
8073868-8075598,8075764-8075829,8076763-8077788,
8077893-8078041
Length = 4264
Score = 28.3 bits (60), Expect = 7.3
Identities = 21/92 (22%), Positives = 40/92 (43%)
Frame = -1
Query: 691 ENHKDETYLRRVIKPLEGLLIAHKRIFIKDSAVNAVCYGAKVLLPGILRYEDGIEVDQEI 512
E D+++L ++ E +D C G V + G ED +EV++++
Sbjct: 3388 EKQMDDSHLPAALQSTESSQPTEHAAPTQDDGNGLQCEGTTVDVSG--SKEDIMEVEEKL 3445
Query: 511 VIVTTKGEAVALAVALMTTSTMASCDHGVAAK 416
+ + + L VAL +T + +H V A+
Sbjct: 3446 IDDISGSPSSHLPVALKSTESNQPAEHAVPAE 3477
>02_01_0782 +
5827364-5827441,5827733-5827787,5828761-5828849,
5829167-5829191,5829645-5829683,5830316-5830433,
5830857-5831023,5831155-5831518,5831589-5831701,
5832185-5832310,5832436-5833339,5833694-5834036
Length = 806
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = -2
Query: 396 NETRTPENGVSDRKLHRKKSSYKQGKLDKYGKPNENTPKE 277
+E+ EN RK H KKSS ++ K +Y + E
Sbjct: 203 DESSDEENNEGKRKRHHKKSSRRRRKKKRYSSSESESSSE 242
>04_04_1188 +
31579833-31579914,31580001-31580176,31580822-31580923,
31581015-31581245,31581821-31581922,31582092-31582184,
31582275-31582379,31582455-31582514,31582621-31582698,
31582778-31582924,31583011-31583109,31583178-31583267,
31583360-31583451,31583529-31583646,31583783-31583871,
31583998-31584088,31584203-31584294,31584442-31584749,
31584866-31584897
Length = 728
Score = 27.9 bits (59), Expect = 9.7
Identities = 27/110 (24%), Positives = 46/110 (41%), Gaps = 7/110 (6%)
Frame = -2
Query: 336 SYKQGKLDKYGKPN-----ENTPKEWLNSYVNYNVKKEPENGDGVE-EGSRKRTASTANA 175
S +GK K GK N E V V E V+ + K+ S+++
Sbjct: 18 SVSEGKSGKKGKRNAEDEIEKAVSAKKQKTVREKVVPSKEEAKKVKKQPPPKKVESSSSE 77
Query: 174 EDPDVSIE-VKQEXXXXXXKRDSEAPAEADATMDTSESPETAEQPADDSV 28
ED S E VK + + + PA+ +++ D+S+ + ++PA V
Sbjct: 78 EDSSESEEEVKAQPKKTVQPKKAAQPAKEESSDDSSDDSSSDDEPAKKPV 127
>04_04_0876 - 29005543-29005630,29005841-29006596,29006939-29006955
Length = 286
Score = 27.9 bits (59), Expect = 9.7
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = -1
Query: 748 GEKEGMXTMHDILDAQWSY 692
GE++ M TMHD++DA+ +
Sbjct: 243 GEQDNMVTMHDVMDARQEF 261
>03_05_0491 -
24868261-24869383,24869482-24869561,24870193-24870249,
24870567-24870660,24871013-24871099,24871188-24871347,
24871440-24871674
Length = 611
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -3
Query: 473 RCSDDHVYDGLMRSWCSRETEACHNGTRHVPQK 375
RC D V R W E EA H G+ VP++
Sbjct: 100 RCRDGTVETEEERRWLREEQEALHAGSLKVPRR 132
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,599,767
Number of Sequences: 37544
Number of extensions: 367613
Number of successful extensions: 1148
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1095
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1148
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2115411120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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