Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP05_T7_E11
         (770 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    27   0.19 
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    25   0.78 
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     23   4.2  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   5.5  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    22   7.3  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    22   7.3  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 27.1 bits (57), Expect = 0.19
 Identities = 14/48 (29%), Positives = 20/48 (41%)
 Frame = -2

Query: 304 PGPTARNFTASSRRNSSSQPTTGSSTLGVTHLRRGSSAHMDYWRHARS 161
           P P  R  +A S   SSS P  G++  G    R G   +    +  +S
Sbjct: 511 PSPNPRIASAPSSSTSSSPPAKGAAAAGQPSKRNGGETNKQELKRLKS 558


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 25.0 bits (52), Expect = 0.78
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -3

Query: 273 HHAATVHRSPRPDHQRLGSHISGVA 199
           HH   VHR  +P++  L S   G A
Sbjct: 26  HHNGVVHRDLKPENLLLASKAKGAA 50


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 15/65 (23%), Positives = 26/65 (40%), Gaps = 4/65 (6%)
 Frame = -3

Query: 273 HHAATVHRSPRPDHQRLGSHISGVAALHTWTTGD---THAAFKLSLDSPQT-SSSTGDTH 106
           ++ A +   P P +    SHI    ++ T+T       H   ++      T S  T + H
Sbjct: 429 YNPALIQSQPSPQYPSTSSHILQQPSIRTYTQQQFPYVHDTLQIQPQEQLTLSKVTSNYH 488

Query: 105 AAFQA 91
             FQ+
Sbjct: 489 EEFQS 493


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -2

Query: 364 SPSKPASQPQQDH 326
           SPS   SQP QDH
Sbjct: 45  SPSLLTSQPHQDH 57


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = +2

Query: 551 LNELIDELVPGWSGFSDFPIWSYISGSSCSFATN 652
           LN + +++  G      +P WS+    +CS  T+
Sbjct: 91  LNVISNKIGNGGPLLEPYPNWSWAKNQNCSGITS 124


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -3

Query: 273 HHAATVHRSPRPDHQR 226
           HH    HR  R D++R
Sbjct: 156 HHGMAYHRGHRKDYER 171


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,714
Number of Sequences: 438
Number of extensions: 2701
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24154023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)